Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07935

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,455,946	-		MMJJ_RS07930	0.49	-0.1
1,455,958	-		MMJJ_RS07930	0.50	-0.3
1,455,959	+				-0.3
1,456,369	-		MMJJ_RS07930	0.74	-1.1
1,456,802	+				-0.3
1,456,951	-		MMJJ_RS07935	0.29	+2.7
1,456,998	+		MMJJ_RS07935	0.41	-0.3
1,457,418	-		MMJJ_RS07940	0.63	-0.8
1,457,490	-				-1.6
1,457,491	+				+1.2
1,457,518	+				+1.2
1,457,531	-				+1.2
1,457,590	-				-0.4
1,457,655	-		MMJJ_RS07945	0.12	-1.1
1,457,655	-				+1.2
1,457,660	+		MMJJ_RS07945	0.12	-0.4
1,457,682	-				-0.4
1,457,686	-		MMJJ_RS07945	0.15	+0.8
1,458,002	-		MMJJ_RS07945	0.45	+1.2
1,458,016	-		MMJJ_RS07945	0.46	+1.2
1,458,053	+				-1.1
1,458,122	+		MMJJ_RS07945	0.56	+0.2