Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07505

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,377,328	+				+3.9
1,377,329	-				-0.0
1,377,330	+				+3.6
1,377,347	+				+0.8
1,377,359	-				+1.2
1,377,359	-				+1.7
1,377,360	+				+3.4
1,377,460	+		MMJJ_RS07500	0.12	+0.5
1,377,520	-		MMJJ_RS07500	0.18	-1.7
1,377,527	-		MMJJ_RS07500	0.19	+0.3
1,377,528	+		MMJJ_RS07500	0.19	-2.6
1,377,529	-		MMJJ_RS07500	0.19	-3.7
1,377,529	-		MMJJ_RS07500	0.19	-2.1
1,377,530	+		MMJJ_RS07500	0.19	-0.6
1,377,530	+		MMJJ_RS07500	0.19	-0.1
1,377,562	-		MMJJ_RS07500	0.23	-3.8
1,377,563	+		MMJJ_RS07500	0.23	-0.7
1,377,633	-		MMJJ_RS07500	0.30	-1.1
1,377,648	-		MMJJ_RS07500	0.32	-0.7
1,377,649	+		MMJJ_RS07500	0.32	+2.7
1,377,649	+		MMJJ_RS07500	0.32	+1.2
1,377,652	-		MMJJ_RS07500	0.32	-1.0
1,377,653	+		MMJJ_RS07500	0.33	+0.6
1,377,703	+		MMJJ_RS07500	0.38	-2.6
1,377,705	-		MMJJ_RS07500	0.38	-2.2
1,377,731	-		MMJJ_RS07500	0.41	+1.9
1,377,785	-		MMJJ_RS07500	0.47	-1.3
1,377,786	+		MMJJ_RS07500	0.47	-2.6
1,377,787	-		MMJJ_RS07500	0.47	-1.1
1,377,797	+		MMJJ_RS07500	0.48	-2.4
1,377,801	+		MMJJ_RS07500	0.48	-0.4
1,377,801	+		MMJJ_RS07500	0.48	-3.7
1,377,815	+		MMJJ_RS07500	0.50	-2.9
1,377,815	+		MMJJ_RS07500	0.50	+3.4
1,377,838	+		MMJJ_RS07500	0.52	-1.9
1,377,842	-		MMJJ_RS07500	0.53	-2.4
1,377,851	-		MMJJ_RS07500	0.54	+1.0
1,377,851	-		MMJJ_RS07500	0.54	-1.5
1,377,851	-		MMJJ_RS07500	0.54	-1.2
1,377,852	+		MMJJ_RS07500	0.54	+0.4
1,377,852	+		MMJJ_RS07500	0.54	-0.1
1,377,852	+		MMJJ_RS07500	0.54	-1.1
1,377,852	+		MMJJ_RS07500	0.54	-0.3
1,377,852	+		MMJJ_RS07500	0.54	+1.2
1,377,856	+		MMJJ_RS07500	0.54	-1.3
1,377,955	+		MMJJ_RS07500	0.65	-0.3
1,378,017	-		MMJJ_RS07500	0.71	+0.5
1,378,018	+		MMJJ_RS07500	0.72	-2.9
1,378,050	-		MMJJ_RS07500	0.75	-2.3
1,378,065	-		MMJJ_RS07500	0.77	-1.6
1,378,065	-				+0.3
1,378,065	-		MMJJ_RS07500	0.77	+1.2
1,378,069	+		MMJJ_RS07500	0.77	+0.8
1,378,083	+		MMJJ_RS07500	0.79	-1.2
1,378,093	-		MMJJ_RS07500	0.80	-2.3
1,378,094	+		MMJJ_RS07500	0.80	-3.4
1,378,126	+		MMJJ_RS07500	0.83	-0.7
1,378,146	-		MMJJ_RS07500	0.85	+2.3
1,378,148	-		MMJJ_RS07500	0.85	-0.7
1,378,149	+		MMJJ_RS07500	0.86	-3.8
1,378,171	+		MMJJ_RS07500	0.88	-1.7
1,378,235	-				-3.2
1,378,236	+				-0.3
1,378,308	-				-2.0
1,378,312	+				+0.2
1,378,343	+		MMJJ_RS07505	0.16	-2.4
1,378,607	-				+0.3
1,378,622	-				-1.9
1,378,634	-				+1.3
1,378,854	-				-1.9