Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07185

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,314,125	-		MMJJ_RS07175	0.86	-0.6
1,314,132	+		MMJJ_RS07175	0.86	-2.2
1,314,156	-		MMJJ_RS07175	0.87	-1.2
1,314,156	-		MMJJ_RS07175	0.87	+3.4
1,314,157	+		MMJJ_RS07175	0.87	+2.5
1,314,216	+		MMJJ_RS07175	0.90	+3.2
1,314,216	+		MMJJ_RS07175	0.90	+0.2
1,314,219	-				+3.8
1,314,219	-				-2.1
1,314,220	+				+1.4
1,314,220	+				-0.4
1,314,220	+				-2.0
1,314,221	-				+0.5
1,314,249	+				+3.0
1,314,273	+				+0.6
1,314,328	+				+3.5
1,314,344	-				+0.4
1,314,345	+				-1.9
1,314,345	+				+1.4
1,314,349	+				+0.3
1,314,403	+				+3.1
1,314,452	+				+0.4
1,315,103	-				-3.9
1,315,108	-				+0.8
1,315,109	+				-0.1
1,315,224	+		MMJJ_RS07185	0.27	+0.8
1,315,391	-		MMJJ_RS07185	0.67	-2.1
1,315,392	+		MMJJ_RS07185	0.67	+3.6
1,315,392	+		MMJJ_RS07185	0.67	+0.9
1,315,454	-		MMJJ_RS07185	0.82	+1.6
1,315,530	-				+2.4
1,315,566	-				+2.8
1,315,566	-				+0.2
1,315,567	+				+2.8
1,315,576	-				-3.0
1,315,592	-				+2.2
1,315,596	-				+2.0
1,315,596	-				-0.2
1,315,603	+				-0.4
1,315,603	+				+3.5
1,315,611	+				+1.9
1,315,611	+				-2.2
1,315,614	-				-1.8
1,315,614	-				-1.4
1,315,615	+				-0.5
1,315,615	+				-2.2
1,315,618	-				+0.4
1,315,621	+				-0.4
1,315,796	+				+1.4
1,315,799	-				-1.0
1,315,925	+		MMJJ_RS07190	0.18	-0.8
1,316,260	-		MMJJ_RS07190	0.41	-2.0
1,316,305	-		MMJJ_RS07190	0.44	-1.2
1,316,419	+		MMJJ_RS07190	0.52	-0.2
1,316,419	+		MMJJ_RS07190	0.52	-0.2
1,316,419	+		MMJJ_RS07190	0.52	-1.4
1,316,451	+		MMJJ_RS07190	0.54	-0.2