Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07035

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,291,564	-		MMJJ_RS07030	0.65	-1.7
1,291,589	+		MMJJ_RS07030	0.66	-0.4
1,291,589	+		MMJJ_RS07030	0.66	+4.0
1,291,647	-		MMJJ_RS07030	0.68	-1.5
1,291,648	+		MMJJ_RS07030	0.68	+2.8
1,291,678	-		MMJJ_RS07030	0.69	+2.0
1,291,683	+		MMJJ_RS07030	0.69	-3.0
1,291,693	-		MMJJ_RS07030	0.70	+2.8
1,291,694	+		MMJJ_RS07030	0.70	-3.5
1,291,694	+		MMJJ_RS07030	0.70	-2.6
1,291,694	+		MMJJ_RS07030	0.70	+2.7
1,291,699	-		MMJJ_RS07030	0.70	-0.7
1,291,723	+		MMJJ_RS07030	0.71	-2.0
1,291,762	-		MMJJ_RS07030	0.72	-2.5
1,291,762	-		MMJJ_RS07030	0.72	+4.5
1,291,763	+				-0.2
1,291,796	+		MMJJ_RS07030	0.74	-0.6
1,291,796	+		MMJJ_RS07030	0.74	+4.1
1,291,852	-		MMJJ_RS07030	0.76	+0.4
1,291,853	+		MMJJ_RS07030	0.76	+3.5
1,291,858	-		MMJJ_RS07030	0.76	+2.7
1,291,859	+		MMJJ_RS07030	0.76	-0.2
1,291,859	+		MMJJ_RS07030	0.76	-1.3
1,291,870	-		MMJJ_RS07030	0.77	+2.2
1,291,911	-		MMJJ_RS07030	0.78	-2.5
1,291,912	+		MMJJ_RS07030	0.78	-0.0
1,291,913	-		MMJJ_RS07030	0.78	+3.6
1,291,914	+		MMJJ_RS07030	0.78	+2.2
1,291,914	+		MMJJ_RS07030	0.78	+2.7
1,291,915	-		MMJJ_RS07030	0.78	-0.6
1,291,915	-		MMJJ_RS07030	0.78	+3.7
1,291,915	-		MMJJ_RS07030	0.78	-0.2
1,291,919	+		MMJJ_RS07030	0.79	+0.1
1,291,964	+		MMJJ_RS07030	0.80	+2.5
1,292,061	-		MMJJ_RS07030	0.84	+1.7
1,292,062	+		MMJJ_RS07030	0.84	-0.7
1,292,062	+		MMJJ_RS07030	0.84	+0.1
1,292,062	+		MMJJ_RS07030	0.84	+2.7
1,292,094	+		MMJJ_RS07030	0.85	+0.9
1,292,095	-		MMJJ_RS07030	0.85	-1.0
1,292,096	+		MMJJ_RS07030	0.86	+0.8
1,292,113	+		MMJJ_RS07030	0.86	+2.0
1,292,140	+		MMJJ_RS07030	0.87	-2.4
1,292,161	-		MMJJ_RS07030	0.88	-0.6
1,292,161	-		MMJJ_RS07030	0.88	+1.9
1,292,162	+		MMJJ_RS07030	0.88	+2.4
1,292,166	-		MMJJ_RS07030	0.88	-3.8
1,292,166	-		MMJJ_RS07030	0.88	-1.6
1,292,167	+		MMJJ_RS07030	0.88	-1.2
1,292,167	+		MMJJ_RS07030	0.88	-2.9
1,292,167	+		MMJJ_RS07030	0.88	+2.7
1,292,167	+		MMJJ_RS07030	0.88	-0.2
1,292,171	-		MMJJ_RS07030	0.88	+0.1
1,292,191	-		MMJJ_RS07030	0.89	+0.4
1,292,233	-				+2.0
1,292,233	-				-0.9
1,292,253	-				-0.9
1,292,254	+				+5.5
1,292,254	+				-0.9
1,292,259	+				-0.3
1,292,261	-				-0.8
1,292,261	-				+3.7
1,292,262	+				+5.1
1,292,286	+				-2.2
1,292,286	+				-2.5
1,292,286	+				-3.4
1,292,332	+				+2.9
1,292,395	-				+3.2
1,292,398	-				+2.1
1,292,398	-				-0.4
1,292,414	+				-0.9
1,292,507	-				-2.5
1,292,507	-				+0.2
1,292,507	-				-0.2
1,292,508	+				+2.0
1,292,508	+				-1.1
1,292,510	+				+1.3
1,292,510	+				-1.6
1,292,510	+				-2.1
1,292,511	-				+2.0
1,292,511	-				-2.2
1,292,512	+				-2.6
1,292,512	+				+1.1
1,292,513	-				-1.3
1,292,514	+				-2.5
1,292,517	-				+2.6
1,292,534	-				+0.7
1,292,535	+				+4.2
1,292,535	+				+0.9
1,292,535	+				+6.3
1,292,549	-				-0.6
1,292,550	+				-0.2
1,292,573	+				+0.4
1,292,651	+				+2.4
1,292,739	+		MMJJ_RS07035	0.20	-1.9
1,293,014	-		MMJJ_RS07035	0.50	+0.4
1,293,035	-		MMJJ_RS07035	0.52	-1.2
1,293,086	-		MMJJ_RS07035	0.58	+0.4
1,293,086	-		MMJJ_RS07035	0.58	-1.8
1,293,439	-				+1.8
1,293,439	-				+1.5
1,293,440	+				-0.4
1,293,485	+				+0.6
1,293,571	-				+3.8
1,293,580	-				-0.9
1,293,917	-		MMJJ_RS07040	0.31	-0.3
1,294,328	-		MMJJ_RS07040	0.62	-1.2