Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07010

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,286,058	+				+1.4
1,286,265	+		MMJJ_RS07000	0.80	-1.2
1,286,278	+				+0.4
1,286,278	+		MMJJ_RS07000	0.81	-0.2
1,286,480	-				+2.1
1,286,498	+				-0.6
1,286,521	+				-1.8
1,286,550	+				-1.0
1,286,551	-				-3.1
1,286,551	-				+0.8
1,286,552	+				+2.6
1,286,556	+				-2.6
1,286,582	-				-1.2
1,286,590	-				+2.5
1,286,590	-				-1.2
1,286,590	-				-0.2
1,286,591	+				-2.6
1,286,591	+				+1.7
1,286,593	+				-2.1
1,286,600	+				+0.7
1,286,602	+				-2.1
1,286,602	+				-0.9
1,286,624	-				-3.0
1,286,624	-				-0.2
1,286,624	-				-1.7
1,286,625	+				-2.5
1,286,642	-				+0.9
1,286,654	-				+1.4
1,286,734	+		MMJJ_RS07005	0.34	-0.9
1,286,741	+		MMJJ_RS07005	0.36	-2.6
1,286,741	+		MMJJ_RS07005	0.36	-1.7
1,286,774	-		MMJJ_RS07005	0.47	-1.1
1,286,792	+		MMJJ_RS07005	0.53	+2.6
1,286,815	-		MMJJ_RS07005	0.60	-1.4
1,286,815	-		MMJJ_RS07005	0.60	-0.7
1,286,857	-		MMJJ_RS07005	0.73	-2.9
1,286,899	+		MMJJ_RS07005	0.86	-2.5
1,286,921	-				-0.5
1,286,934	-				+0.2
1,286,945	+				-1.5
1,286,962	-				+2.9
1,287,037	+		MMJJ_RS07010	0.25	+4.8
1,287,038	-		MMJJ_RS07010	0.25	-2.1
1,287,039	+		MMJJ_RS07010	0.26	+1.3
1,287,104	-		MMJJ_RS07010	0.66	+3.3
1,287,104	-		MMJJ_RS07010	0.66	+1.4
1,287,104	-		MMJJ_RS07010	0.66	+2.5
1,287,104	-		MMJJ_RS07010	0.66	+2.1
1,287,105	+		MMJJ_RS07010	0.67	-1.2
1,287,105	+		MMJJ_RS07010	0.67	+0.1
1,287,105	+		MMJJ_RS07010	0.67	-1.4
1,287,105	+		MMJJ_RS07010	0.67	+1.7
1,287,106	-		MMJJ_RS07010	0.67	-0.6
1,287,106	-		MMJJ_RS07010	0.67	-2.1
1,287,106	-				+1.4
1,287,107	+		MMJJ_RS07010	0.68	+1.2
1,287,107	+		MMJJ_RS07010	0.68	-3.0
1,287,107	+		MMJJ_RS07010	0.68	+0.1
1,287,107	+		MMJJ_RS07010	0.68	+0.2
1,287,111	-		MMJJ_RS07010	0.70	+0.9
1,287,112	+		MMJJ_RS07010	0.71	-1.5
1,287,112	+		MMJJ_RS07010	0.71	-1.2
1,287,153	+				-0.0
1,287,169	-				+0.8
1,287,169	-				-3.0
1,287,180	-				+1.6
1,287,181	+				+0.7
1,287,181	+				+2.3
1,287,181	+				-0.3
1,287,181	+				+1.1
1,287,182	-				+1.4
1,287,182	-				-3.0
1,287,182	-				+0.2
1,287,183	+				-0.2
1,287,183	+				-0.5
1,287,224	+				-0.2
1,288,106	+		MMJJ_RS07015	0.64	+1.4
1,288,152	-		MMJJ_RS07015	0.67	+0.7