Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06930

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,270,772	+		MMJJ_RS06920	0.40	-2.6
1,270,846	+		MMJJ_RS06920	0.53	+0.4
1,271,083	-				-1.5
1,271,093	-				-0.7
1,271,094	+				+2.6
1,271,096	-				+1.5
1,271,096	-				+0.4
1,271,098	-				-2.2
1,271,099	+				-0.4
1,271,099	+				+1.2
1,271,103	+				+2.1
1,271,103	+				+0.4
1,271,113	+				-2.7
1,271,113	+				-0.1
1,271,142	-				-0.4
1,271,142	-				-3.0
1,271,146	-				-3.2
1,271,147	+				+2.5
1,271,549	-		MMJJ_RS06925	0.69	+2.7
1,271,641	+				+0.4
1,271,688	-				+0.8
1,271,957	+		MMJJ_RS06930	0.24	+0.4
1,272,013	+		MMJJ_RS06930	0.30	-1.2
1,272,013	+				-0.6
1,272,160	-		MMJJ_RS06930	0.47	-1.0
1,272,161	+		MMJJ_RS06930	0.47	-1.4
1,272,277	-		MMJJ_RS06930	0.60	+0.4
1,272,328	-		MMJJ_RS06930	0.66	-1.1
1,272,554	+				+1.4
1,272,610	+				-0.2
1,272,671	-				+1.8
1,272,671	-				-0.7
1,272,672	+				-1.0
1,272,674	+				-0.6
1,272,674	+				-0.6
1,272,686	-				-2.8
1,272,740	-				-1.8
1,272,741	+				-2.3
1,272,741	+				+0.4
1,272,741	+				+0.4
1,272,787	-		MMJJ_RS06935	0.13	-3.5
1,272,787	-		MMJJ_RS06935	0.13	-1.9
1,272,788	+		MMJJ_RS06935	0.13	-1.0
1,272,820	-		MMJJ_RS06935	0.16	-2.9
1,272,820	-		MMJJ_RS06935	0.16	-2.7
1,272,825	+		MMJJ_RS06935	0.17	-1.6
1,272,863	-		MMJJ_RS06935	0.20	-0.9
1,272,863	-		MMJJ_RS06935	0.20	-1.8
1,272,867	-		MMJJ_RS06935	0.20	+2.3
1,272,947	-		MMJJ_RS06935	0.28	-2.7
1,273,024	-		MMJJ_RS06935	0.35	-1.8
1,273,025	+		MMJJ_RS06935	0.35	+1.1
1,273,041	-		MMJJ_RS06935	0.36	-0.6
1,273,055	-		MMJJ_RS06935	0.37	-0.6
1,273,055	-		MMJJ_RS06935	0.37	-0.4
1,273,101	+		MMJJ_RS06935	0.41	-1.2
1,273,106	+		MMJJ_RS06935	0.42	-1.4
1,273,145	-		MMJJ_RS06935	0.45	+2.0
1,273,161	+		MMJJ_RS06935	0.47	-0.6
1,273,250	-		MMJJ_RS06935	0.55	-3.2
1,273,256	-		MMJJ_RS06935	0.55	-1.0
1,273,256	-		MMJJ_RS06935	0.55	-1.6
1,273,281	+		MMJJ_RS06935	0.58	-2.1
1,273,282	-		MMJJ_RS06935	0.58	-3.2
1,273,283	+		MMJJ_RS06935	0.58	-2.8
1,273,304	-		MMJJ_RS06935	0.60	-0.8
1,273,304	-		MMJJ_RS06935	0.60	-2.4
1,273,322	-		MMJJ_RS06935	0.61	-1.1
1,273,322	-		MMJJ_RS06935	0.61	-2.5
1,273,323	+		MMJJ_RS06935	0.61	-1.1
1,273,396	-		MMJJ_RS06935	0.68	+0.7
1,273,433	+		MMJJ_RS06935	0.71	-1.4
1,273,433	+		MMJJ_RS06935	0.71	-1.2
1,273,433	+		MMJJ_RS06935	0.71	-0.6
1,273,453	-		MMJJ_RS06935	0.73	-1.3
1,273,459	-		MMJJ_RS06935	0.74	-2.9
1,273,504	-		MMJJ_RS06935	0.78	-1.4
1,273,504	-		MMJJ_RS06935	0.78	-2.0
1,273,580	+		MMJJ_RS06935	0.85	+1.9