Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06885

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,266,741	+		MMJJ_RS06875	0.65	+1.4
1,266,751	-		MMJJ_RS06875	0.66	-1.4
1,266,752	+		MMJJ_RS06875	0.67	-0.2
1,266,888	+		MMJJ_RS06875	0.87	-1.6
1,266,905	-		MMJJ_RS06875	0.90	-1.0
1,266,909	-				+1.4
1,266,914	-				-0.2
1,266,959	+				-1.4
1,266,960	-				+0.4
1,267,224	-		MMJJ_RS06880	0.33	+1.4
1,267,557	+		MMJJ_RS06880	0.82	-1.5
1,267,583	+		MMJJ_RS06880	0.86	+1.4
1,267,781	-				+1.4
1,267,782	+		MMJJ_RS06885	0.21	-1.8
1,267,782	+		MMJJ_RS06885	0.21	-0.2
1,267,785	+				+0.4
1,267,932	-		MMJJ_RS06885	0.53	-1.0
1,267,951	-				+1.4
1,267,952	+				+0.4
1,268,075	+		MMJJ_RS06885	0.83	+0.4
1,268,075	+		MMJJ_RS06885	0.83	-1.0
1,268,206	-		MMJJ_RS06890	0.20	+0.4
1,268,236	-		MMJJ_RS06890	0.31	+1.4
1,268,236	-		MMJJ_RS06890	0.31	-0.2
1,268,256	-		MMJJ_RS06890	0.39	+1.4
1,268,268	+		MMJJ_RS06890	0.44	-0.4
1,268,424	-				+0.8
1,268,427	-				-0.6
1,268,471	+		MMJJ_RS06895	0.19	-1.0
1,268,475	+		MMJJ_RS06895	0.20	-0.6
1,268,480	-				+1.4
1,268,791	-		MMJJ_RS06900	0.33	+1.4
1,268,861	-				+1.4
1,268,972	+				+1.4