Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06875

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,265,316	-		MMJJ_RS06865	0.12	+0.4
1,265,375	+		MMJJ_RS06865	0.19	+3.0
1,265,499	-		MMJJ_RS06865	0.33	+1.4
1,265,715	-		MMJJ_RS06865	0.58	+1.4
1,265,783	+		MMJJ_RS06865	0.66	-0.6
1,265,785	-		MMJJ_RS06865	0.67	-0.6
1,265,788	+		MMJJ_RS06865	0.67	+1.4
1,265,789	-		MMJJ_RS06865	0.67	+1.4
1,265,885	-		MMJJ_RS06865	0.78	-0.2
1,266,044	-				+0.4
1,266,054	+				-1.6
1,266,057	-				-1.4
1,266,057	-				-0.6
1,266,058	+				-0.6
1,266,247	+				+1.4
1,266,266	+		MMJJ_RS06870	0.83	-0.6
1,266,273	+		MMJJ_RS06870	0.86	-0.2
1,266,275	+		MMJJ_RS06870	0.87	-1.0
1,266,322	-				-1.8
1,266,741	+		MMJJ_RS06875	0.65	+1.4
1,266,751	-		MMJJ_RS06875	0.66	-1.4
1,266,752	+		MMJJ_RS06875	0.67	-0.2
1,266,888	+		MMJJ_RS06875	0.87	-1.6
1,266,905	-		MMJJ_RS06875	0.90	-1.0
1,266,909	-				+1.4
1,266,914	-				-0.2
1,266,959	+				-1.4
1,266,960	-				+0.4
1,267,224	-		MMJJ_RS06880	0.33	+1.4
1,267,557	+		MMJJ_RS06880	0.82	-1.5
1,267,583	+		MMJJ_RS06880	0.86	+1.4
1,267,781	-				+1.4
1,267,782	+		MMJJ_RS06885	0.21	-1.8
1,267,782	+		MMJJ_RS06885	0.21	-0.2
1,267,785	+				+0.4
1,267,932	-		MMJJ_RS06885	0.53	-1.0
1,267,951	-				+1.4
1,267,952	+				+0.4