Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06855

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,263,715	-				-1.2
1,263,718	-				-0.6
1,263,902	-		MMJJ_RS06845	0.37	-0.2
1,263,915	+		MMJJ_RS06845	0.39	+0.4
1,264,061	-				+1.4
1,264,117	+		MMJJ_RS06845	0.82	-0.2
1,264,223	-				-0.2
1,264,224	+				-0.2
1,264,246	+				-1.4
1,264,252	+				-1.2
1,264,252	+				+1.4
1,264,381	-		MMJJ_RS06850	0.39	-1.9
1,264,627	-				-0.2
1,264,649	-				+0.7
1,264,650	+				-2.7
1,264,666	-				-0.9
1,264,670	+				+0.4
1,264,683	-		MMJJ_RS06855	0.12	-1.4
1,264,684	+				+1.4
1,264,693	-		MMJJ_RS06855	0.15	-0.9
1,264,760	+		MMJJ_RS06855	0.37	+1.4
1,264,924	-				-0.9
1,264,927	-				-2.2
1,264,988	+		MMJJ_RS06860	0.14	+0.4
1,264,997	-		MMJJ_RS06860	0.18	-1.4
1,265,026	-		MMJJ_RS06860	0.29	-0.6
1,265,066	-		MMJJ_RS06860	0.45	-0.2
1,265,137	-		MMJJ_RS06860	0.73	-1.8
1,265,140	-		MMJJ_RS06860	0.75	-1.8
1,265,140	-		MMJJ_RS06860	0.75	-2.9
1,265,140	-		MMJJ_RS06860	0.75	+0.4
1,265,145	+				+1.4
1,265,193	-				-2.8
1,265,194	+				-1.4
1,265,228	-				-2.5
1,265,316	-		MMJJ_RS06865	0.12	+0.4
1,265,375	+		MMJJ_RS06865	0.19	+3.0
1,265,499	-		MMJJ_RS06865	0.33	+1.4
1,265,715	-		MMJJ_RS06865	0.58	+1.4
1,265,783	+		MMJJ_RS06865	0.66	-0.6
1,265,785	-		MMJJ_RS06865	0.67	-0.6
1,265,788	+		MMJJ_RS06865	0.67	+1.4
1,265,789	-		MMJJ_RS06865	0.67	+1.4
1,265,885	-		MMJJ_RS06865	0.78	-0.2