Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06600

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,220,139	+		MMJJ_RS06595	0.87	-0.1
1,220,308	-				-0.7
1,220,308	-				-2.4
1,220,311	-				+1.6
1,220,312	+				-1.1
1,220,312	+				-0.2
1,220,374	-				+0.5
1,220,374	-				-1.4
1,220,375	+				+1.1
1,220,378	+				+2.2
1,220,403	-				+1.6
1,220,480	-		MMJJ_RS06600	0.12	-1.1
1,220,563	-		MMJJ_RS06600	0.37	-2.0
1,220,567	-		MMJJ_RS06600	0.38	-0.8
1,220,675	-				-0.1
1,220,720	-		MMJJ_RS06600	0.82	-2.0
1,220,720	-		MMJJ_RS06600	0.82	-0.5
1,220,745	-				-1.8
1,220,746	+				+1.5
1,220,763	+				-0.1
1,220,814	-				-0.7
1,220,836	-		MMJJ_RS06605	0.12	-0.1
1,220,837	+		MMJJ_RS06605	0.12	-0.7
1,220,908	-		MMJJ_RS06605	0.35	+0.7
1,220,908	-		MMJJ_RS06605	0.35	+0.1
1,220,909	+				+0.5
1,220,912	-		MMJJ_RS06605	0.37	+0.9
1,220,912	-		MMJJ_RS06605	0.37	-1.5
1,220,926	-		MMJJ_RS06605	0.41	-0.2
1,220,926	-		MMJJ_RS06605	0.41	-0.8
1,220,926	-		MMJJ_RS06605	0.41	-0.1
1,220,928	-		MMJJ_RS06605	0.42	+1.5
1,220,929	+		MMJJ_RS06605	0.42	-2.4
1,220,929	+		MMJJ_RS06605	0.42	-1.8
1,221,026	+		MMJJ_RS06605	0.74	-0.1
1,221,034	+		MMJJ_RS06605	0.76	+3.8
1,221,045	-		MMJJ_RS06605	0.80	-1.5
1,221,045	-		MMJJ_RS06605	0.80	+4.1
1,221,045	-		MMJJ_RS06605	0.80	-0.1
1,221,046	+		MMJJ_RS06605	0.80	+0.9
1,221,082	+				-1.1
1,221,085	+				-1.0
1,221,085	+				-0.7
1,221,085	+				-2.1
1,221,087	-				+1.1
1,221,087	-				-0.4
1,221,088	+				-2.6
1,221,101	+				+0.3
1,221,107	-				+0.2
1,221,107	-				+1.9
1,221,108	+				+2.5
1,221,144	+				-0.5
1,221,176	+				-0.4
1,221,181	-				+2.4
1,221,181	-				-2.4
1,221,182	+				+0.8
1,221,182	+				-0.1
1,221,182	+				+1.6
1,221,182	+				+0.5
1,221,187	-				+2.1
1,221,187	-				+0.2
1,221,192	+				+0.7
1,221,196	-				-1.1
1,221,196	-				-1.7
1,221,196	-				-0.7
1,221,203	+				+2.1
1,221,581	-				+0.5