Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06340

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,172,939	-		MMJJ_RS06335	0.21	-0.1
1,172,948	+		MMJJ_RS06335	0.22	+1.4
1,173,451	+				+1.4
1,173,716	-				-0.1
1,173,722	-				-0.0
1,173,762	-				-0.6
1,173,763	+				-0.9
1,173,763	+				+1.4
1,173,845	+				-2.3
1,173,874	-				-1.9
1,173,874	-				-2.4
1,173,874	-				+0.7
1,173,874	-				-1.7
1,173,874	-				+3.7
1,173,874	-				-1.1
1,173,874	-				+1.5
1,173,874	-				+0.4
1,173,875	+				+3.8
1,173,875	+				-1.1
1,173,875	+				-2.8
1,173,875	+				-0.6
1,173,875	+				-1.3
1,173,878	-				-1.6
1,173,879	+				+1.2
1,173,880	-				+2.2
1,173,933	+				+2.6
1,174,331	+		MMJJ_RS06340	0.25	-0.5
1,174,334	-				+0.4
1,174,335	+		MMJJ_RS06340	0.25	-0.1
1,174,420	+		MMJJ_RS06340	0.30	-1.4
1,174,527	-		MMJJ_RS06340	0.37	-1.5
1,175,246	+				+1.4
1,176,067	-				+2.4
1,176,107	-		MMJJ_RS06345	0.61	+0.4
1,176,129	+		MMJJ_RS06345	0.64	-1.1
1,176,335	-				+0.9
1,176,405	+				+1.4