Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS05575

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,039,594	+				-0.9
1,039,648	-				-1.9
1,039,765	-		MMJJ_RS05565	0.19	-1.4
1,039,767	-		MMJJ_RS05565	0.19	-0.6
1,039,819	+		MMJJ_RS05565	0.25	+0.4
1,040,100	-		MMJJ_RS05565	0.61	-1.2
1,040,456	+		MMJJ_RS05570	0.22	-1.2
1,040,613	+				-2.9
1,040,719	+		MMJJ_RS05575	0.20	-1.2
1,040,794	+		MMJJ_RS05575	0.32	-1.6
1,040,831	+		MMJJ_RS05575	0.37	-0.6
1,040,834	-		MMJJ_RS05575	0.38	+1.4
1,040,834	-		MMJJ_RS05575	0.38	-1.9
1,040,839	+		MMJJ_RS05575	0.38	-0.6
1,040,895	+		MMJJ_RS05575	0.47	-0.6
1,041,076	+		MMJJ_RS05575	0.74	-1.7
1,041,100	-		MMJJ_RS05575	0.78	-2.3
1,041,177	+		MMJJ_RS05575	0.89	-1.7
1,041,246	-				-1.2
1,041,247	+				-1.5
1,041,256	+				-2.7
1,041,256	+				+3.3
1,041,257	-				+1.5
1,041,257	-				+3.2
1,041,258	+				-1.4
1,041,332	+		MMJJ_RS05580	0.16	+4.2
1,041,332	+		MMJJ_RS05580	0.16	+2.4
1,041,337	+		MMJJ_RS05580	0.17	+0.1
1,041,346	-		MMJJ_RS05580	0.19	-0.7
1,041,351	+		MMJJ_RS05580	0.20	-2.0
1,041,397	-		MMJJ_RS05580	0.30	-1.4
1,041,416	-		MMJJ_RS05580	0.35	-2.3
1,041,417	+		MMJJ_RS05580	0.35	+2.0
1,041,417	+		MMJJ_RS05580	0.35	+2.3
1,041,428	+		MMJJ_RS05580	0.37	-1.1
1,041,443	-		MMJJ_RS05580	0.41	+0.4
1,041,473	-		MMJJ_RS05580	0.47	+0.1
1,041,474	+		MMJJ_RS05580	0.47	+0.1
1,041,498	+		MMJJ_RS05580	0.53	-1.9
1,041,540	-		MMJJ_RS05580	0.62	-2.8
1,041,540	-		MMJJ_RS05580	0.62	+1.5
1,041,540	-		MMJJ_RS05580	0.62	-2.6
1,041,540	-				+1.4
1,041,541	+		MMJJ_RS05580	0.62	-0.9
1,041,712	+				-1.5
1,041,716	+				-1.6
1,041,716	+				-2.1
1,041,748	-				+0.4
1,041,748	-				-0.6
1,041,799	-				-0.9
1,041,804	+		MMJJ_RS05585	0.10	+0.6
1,041,809	+		MMJJ_RS05585	0.11	-0.9
1,041,838	-		MMJJ_RS05585	0.14	-2.8
1,041,838	-		MMJJ_RS05585	0.14	-0.4
1,041,850	+		MMJJ_RS05585	0.16	-2.8
1,041,944	-		MMJJ_RS05585	0.26	+2.2
1,041,944	-		MMJJ_RS05585	0.26	-1.5
1,041,945	+		MMJJ_RS05585	0.26	-2.8
1,041,945	+		MMJJ_RS05585	0.26	+1.9
1,041,945	+		MMJJ_RS05585	0.26	-0.7
1,041,945	+		MMJJ_RS05585	0.26	+1.3
1,041,945	+		MMJJ_RS05585	0.26	-0.4
1,041,946	-		MMJJ_RS05585	0.26	-3.1
1,041,946	-		MMJJ_RS05585	0.26	-1.8
1,041,947	+		MMJJ_RS05585	0.26	-0.2
1,041,949	-		MMJJ_RS05585	0.27	+0.7
1,041,950	+		MMJJ_RS05585	0.27	-1.8
1,041,950	+		MMJJ_RS05585	0.27	-0.6
1,041,951	-		MMJJ_RS05585	0.27	+0.6
1,041,951	-		MMJJ_RS05585	0.27	-3.1
1,041,952	+		MMJJ_RS05585	0.27	+3.7
1,041,952	+		MMJJ_RS05585	0.27	-1.8
1,041,952	+		MMJJ_RS05585	0.27	-2.7
1,041,952	+		MMJJ_RS05585	0.27	-0.5
1,041,954	+		MMJJ_RS05585	0.27	-0.7
1,042,223	-		MMJJ_RS05585	0.57	+3.3