Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS03200

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
605,498	+		MMJJ_RS03190	0.66	-0.7
605,518	-		MMJJ_RS03190	0.68	-0.7
605,581	+		MMJJ_RS03190	0.73	-0.3
605,679	-		MMJJ_RS03190	0.80	-1.0
605,971	-				+1.3
605,998	+				+0.3
606,027	-				+2.3
606,043	+				-2.1
606,099	+				-1.6
606,106	+				+0.7
606,118	-				+0.7
606,122	-				-0.0
606,122	-				-1.8
606,123	+				+2.8
606,123	+				-1.3
606,124	-				-0.3
606,142	-				-0.9
606,155	+				+1.8
606,155	+				-1.7
606,172	+				+2.8
606,195	+				+0.0
606,195	+				+0.3
606,198	-				-1.0
606,216	-		MMJJ_RS03195	0.15	-1.5
606,276	+		MMJJ_RS03195	0.36	-3.4
606,346	-		MMJJ_RS03195	0.61	-1.8
606,347	+		MMJJ_RS03195	0.62	-2.4
606,414	+		MMJJ_RS03195	0.86	+2.2
606,422	+		MMJJ_RS03195	0.89	-0.8
606,422	+		MMJJ_RS03195	0.89	+2.5
606,422	+		MMJJ_RS03195	0.89	-1.9
606,618	+		MMJJ_RS03200	0.20	-1.0
606,775	-		MMJJ_RS03200	0.42	+0.3
606,775	-				+0.3
606,859	+		MMJJ_RS03200	0.53	-0.7
607,078	-		MMJJ_RS03200	0.83	-0.3
607,080	-		MMJJ_RS03200	0.83	-1.7
607,182	+				+0.0
607,193	-				+0.3
607,214	-				+0.7
607,214	-				+1.8
607,215	+				-1.0
607,215	+				-0.7
607,215	+				+0.9
607,217	+				-1.8
607,220	-				+0.5
607,225	-				-2.3
607,225	-				-0.3
607,232	-				-1.8
607,232	-				-1.3
607,232	-				-1.8
607,232	-				-2.0
607,232	-				-0.6
607,233	+				-1.6
607,236	-				+0.7
607,236	-				-1.7
607,236	-				-1.4
607,236	-				+0.3
607,237	+				+2.2
607,237	+				-1.0
607,245	-				-1.5
607,248	-				+1.1
607,262	+				-2.2
607,273	-				-2.0
607,295	-				-3.1
607,295	-				+1.5
607,296	+				+1.3
607,296	+				+0.4
607,299	-				-0.0
607,300	+				+1.0
607,307	+				+2.1
607,308	-				-2.7
607,309	+				-0.1
607,348	-		MMJJ_RS03205	0.17	-1.3
607,408	+		MMJJ_RS03205	0.28	+1.3
607,474	+		MMJJ_RS03205	0.41	-2.5
607,509	+		MMJJ_RS03205	0.48	-2.8
607,512	-		MMJJ_RS03205	0.48	-1.8
607,513	+		MMJJ_RS03205	0.49	-2.1
607,534	-		MMJJ_RS03205	0.53	-2.5
607,534	-		MMJJ_RS03205	0.53	-0.8
607,535	+		MMJJ_RS03205	0.53	-2.1
607,581	-		MMJJ_RS03205	0.62	-0.5
607,582	+		MMJJ_RS03205	0.62	+2.1
607,585	+		MMJJ_RS03205	0.63	-1.0
607,608	-		MMJJ_RS03205	0.67	-2.7
607,608	-		MMJJ_RS03205	0.67	-3.1
607,659	-		MMJJ_RS03205	0.77	-0.3
607,659	-		MMJJ_RS03205	0.77	-0.1
607,666	-		MMJJ_RS03205	0.78	+2.6
607,719	-		MMJJ_RS03205	0.89	-2.2
607,719	-		MMJJ_RS03205	0.89	-2.8
607,720	+		MMJJ_RS03205	0.89	+2.8
607,739	-				-1.3
607,756	+				+1.8
607,785	-				-1.3
607,785	-				+0.5
607,785	-				-1.3
607,786	+				-0.2
607,812	+				-1.7
607,812	+				-2.8
607,817	-				+3.6
607,818	+				-0.2
607,821	-				+1.7
607,822	+				+0.7
607,826	-				+0.4
607,826	-				-1.9
607,826	-				+1.5
607,827	+				+2.8
607,839	+				-1.9
607,839	+				+1.3
607,848	-				+4.2
607,854	-				+1.5
607,855	+				+0.7
607,855	+				-0.7
607,861	-				+2.9
607,862	+				+1.5
607,862	+				+4.1
607,863	-				+0.3
607,863	-				-3.0
607,863	-				-1.3
607,887	+				+2.0
607,892	+				-0.7
607,892	+				-0.3
608,091	+				-0.7
608,093	+				+0.3