Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS02865

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
539,725	-				+1.8
539,725	-				+1.3
539,726	+				+0.2
539,726	+				-0.6
539,727	-				-0.7
539,727	-				+1.8
539,820	-				+0.8
539,821	+				-1.5
539,845	+				+1.4
539,876	+				-0.6
539,897	+		MMJJ_RS02860	0.12	-1.1
540,224	-		MMJJ_RS02860	0.71	-0.4
540,295	-		MMJJ_RS02860	0.84	+2.2
540,412	-				+2.6
540,426	+				-2.0
540,450	+				+0.7
540,452	-				+2.3
540,455	+				+0.3
540,464	-				-0.6
540,477	-				-2.7
540,478	+				-0.1
540,524	-				+0.7
540,540	-				+1.3
540,540	-				-0.7
540,540	-				-2.5
540,541	+				-2.9
540,567	-		MMJJ_RS02865	0.11	-2.2
540,712	-		MMJJ_RS02865	0.31	-0.1
540,713	+		MMJJ_RS02865	0.31	-2.0
540,814	+		MMJJ_RS02865	0.44	+1.4
540,814	+		MMJJ_RS02865	0.44	-2.8
540,923	-		MMJJ_RS02865	0.59	-2.7
540,971	-		MMJJ_RS02865	0.65	-0.5
540,972	+		MMJJ_RS02865	0.65	-0.1
541,000	-		MMJJ_RS02865	0.69	-1.1
541,000	-		MMJJ_RS02865	0.69	+0.8
541,000	-		MMJJ_RS02865	0.69	-1.2
541,000	-		MMJJ_RS02865	0.69	-1.9
541,001	+		MMJJ_RS02865	0.69	-1.7
541,069	-		MMJJ_RS02865	0.78	+1.9
541,089	+		MMJJ_RS02865	0.81	+0.8
541,089	+		MMJJ_RS02865	0.81	+0.1
541,096	+		MMJJ_RS02865	0.82	+0.7
541,096	+		MMJJ_RS02865	0.82	-1.0
541,128	+		MMJJ_RS02865	0.86	+0.1
541,149	+		MMJJ_RS02865	0.89	-0.8
541,196	+				+0.2
541,228	-				-2.2
541,260	-				-4.0
541,261	+				+0.1
541,264	+				-0.7
541,264	+				+1.3
541,264	+				-2.7
541,278	+				+1.4
541,278	+				+0.5
541,358	-				-0.5
541,367	-				-1.0
541,368	+				+1.3
541,368	+				+0.4
541,372	-				-1.2
541,373	+				-0.5
541,436	+		MMJJ_RS02870	0.17	+0.4
541,454	-		MMJJ_RS02870	0.21	-1.5
541,455	+		MMJJ_RS02870	0.21	-0.3
541,518	-		MMJJ_RS02870	0.33	+2.2
541,518	-		MMJJ_RS02870	0.33	-1.7
541,565	+		MMJJ_RS02870	0.42	+1.6
541,566	-		MMJJ_RS02870	0.42	-1.8
541,567	+		MMJJ_RS02870	0.42	-0.1
541,629	+		MMJJ_RS02870	0.54	+2.8
541,720	-		MMJJ_RS02870	0.72	-1.0
541,748	-		MMJJ_RS02870	0.77	-2.3
541,751	+		MMJJ_RS02870	0.78	-1.1
541,762	+		MMJJ_RS02870	0.80	-0.8
541,762	+		MMJJ_RS02870	0.80	+0.4
541,762	+		MMJJ_RS02870	0.80	-0.9
541,762	+		MMJJ_RS02870	0.80	+2.2
541,793	+		MMJJ_RS02870	0.86	+4.7
541,827	-				+0.7
541,833	-				-1.5
541,842	-				-0.0
541,842	-				-2.5
541,848	+				+1.9
541,877	-				+1.9
541,882	-				-1.5
541,882	-				+0.0
541,883	+				+1.6
541,904	+				-0.6
541,918	-				+1.7
541,919	+				+0.1
541,919	+				+1.6
541,922	-				+0.1
541,922	-				-0.9
541,922	-				+0.1
541,923	+				-0.5
541,923	+				+0.5
541,923	+				-1.9
541,923	+				+2.0
541,923	+				-1.1
541,923	+				-2.5
541,923	+				-0.2
541,926	-				+0.0
541,926	-				-1.9
541,927	+				-2.4
541,927	+				+1.3
541,927	+				-1.7
541,943	+				+2.7
541,946	+				-4.2
541,948	-				+3.4
541,948	-				-0.5
541,949	+				+0.8
541,952	-				+0.3
541,953	+				+0.3
541,965	-				-2.4
541,965	-				-0.7
541,965	-				-1.2
541,966	+				-1.5
541,966	+				+0.7
541,966	+				+0.1
541,966	+				-3.0
541,966	+				+1.2
541,966	+				-2.2
541,967	-				+0.3
541,967	-				-0.3
541,967	-				-1.5
541,968	+				+1.6
541,968	+				-0.6
541,970	-				-1.5
541,970	-				-1.4
541,970	-				-2.0
541,970	-				-0.7
541,971	+				-2.6
541,971	+				+1.6
541,971	+				-1.1
541,971	+				-0.3
541,971	+				-1.4
542,045	-				+1.0
542,048	-				-3.1
542,132	+		MMJJ_RS02875	0.14	+0.1
542,157	-		MMJJ_RS02875	0.16	-1.6
542,157	-		MMJJ_RS02875	0.16	+1.2
542,158	+		MMJJ_RS02875	0.16	-2.4
542,158	+		MMJJ_RS02875	0.16	-0.3
542,179	-		MMJJ_RS02875	0.18	+1.3