Experiment: McCas_formate_complete Antimycin A 0.01 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS00800 and MMJJ_RS00805 are separated by 67 nucleotides MMJJ_RS00805 and MMJJ_RS00810 are separated by 5 nucleotides MMJJ_RS00810 and MMJJ_RS00815 are separated by 51 nucleotides
MMJJ_RS00800: MMJJ_RS00800 - MFS transporter, at 151,424 to 152,728
_RS00800
MMJJ_RS00805: MMJJ_RS00805 - uroporphyrinogen decarboxylase, at 152,796 to 153,659
_RS00805
MMJJ_RS00810: MMJJ_RS00810 - GTP-binding protein, at 153,665 to 154,573
_RS00810
MMJJ_RS00815: MMJJ_RS00815 - ASKHA domain-containing protein, at 154,625 to 156,403
_RS00815
Position (kb) 152
153
154 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 151.908 kb on + strand, within MMJJ_RS00800 at 151.913 kb on + strand, within MMJJ_RS00800 at 151.915 kb on - strand, within MMJJ_RS00800 at 151.915 kb on - strand, within MMJJ_RS00800 at 151.915 kb on - strand, within MMJJ_RS00800 at 151.915 kb on - strand, within MMJJ_RS00800 at 151.916 kb on + strand, within MMJJ_RS00800 at 151.916 kb on + strand, within MMJJ_RS00800 at 151.916 kb on + strand, within MMJJ_RS00800 at 151.916 kb on + strand, within MMJJ_RS00800 at 151.923 kb on - strand, within MMJJ_RS00800 at 151.924 kb on + strand, within MMJJ_RS00800 at 151.924 kb on + strand, within MMJJ_RS00800 at 151.938 kb on - strand, within MMJJ_RS00800 at 151.938 kb on - strand, within MMJJ_RS00800 at 151.957 kb on + strand, within MMJJ_RS00800 at 151.985 kb on - strand, within MMJJ_RS00800 at 151.986 kb on + strand, within MMJJ_RS00800 at 151.986 kb on + strand, within MMJJ_RS00800 at 151.987 kb on - strand, within MMJJ_RS00800 at 151.987 kb on - strand, within MMJJ_RS00800 at 151.987 kb on - strand, within MMJJ_RS00800 at 151.987 kb on - strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.988 kb on + strand, within MMJJ_RS00800 at 151.994 kb on + strand, within MMJJ_RS00800 at 152.097 kb on - strand, within MMJJ_RS00800 at 152.098 kb on + strand, within MMJJ_RS00800 at 152.098 kb on + strand, within MMJJ_RS00800 at 152.098 kb on + strand, within MMJJ_RS00800 at 152.101 kb on - strand, within MMJJ_RS00800 at 152.101 kb on - strand, within MMJJ_RS00800 at 152.101 kb on - strand, within MMJJ_RS00800 at 152.113 kb on - strand, within MMJJ_RS00800 at 152.116 kb on - strand, within MMJJ_RS00800 at 152.116 kb on - strand, within MMJJ_RS00800 at 152.117 kb on + strand, within MMJJ_RS00800 at 152.157 kb on - strand, within MMJJ_RS00800 at 152.158 kb on + strand, within MMJJ_RS00800 at 152.171 kb on - strand, within MMJJ_RS00800 at 152.172 kb on + strand, within MMJJ_RS00800 at 152.174 kb on - strand, within MMJJ_RS00800 at 152.175 kb on + strand, within MMJJ_RS00800 at 152.175 kb on + strand, within MMJJ_RS00800 at 152.175 kb on + strand, within MMJJ_RS00800 at 152.193 kb on + strand, within MMJJ_RS00800 at 152.217 kb on + strand, within MMJJ_RS00800 at 152.221 kb on - strand, within MMJJ_RS00800 at 152.222 kb on + strand, within MMJJ_RS00800 at 152.232 kb on - strand, within MMJJ_RS00800 at 152.252 kb on - strand, within MMJJ_RS00800 at 152.253 kb on + strand, within MMJJ_RS00800 at 152.293 kb on + strand, within MMJJ_RS00800 at 152.324 kb on + strand, within MMJJ_RS00800 at 152.352 kb on - strand, within MMJJ_RS00800 at 152.368 kb on + strand, within MMJJ_RS00800 at 152.368 kb on + strand, within MMJJ_RS00800 at 152.372 kb on - strand, within MMJJ_RS00800 at 152.373 kb on + strand, within MMJJ_RS00800 at 152.379 kb on - strand, within MMJJ_RS00800 at 152.379 kb on - strand, within MMJJ_RS00800 at 152.379 kb on - strand, within MMJJ_RS00800 at 152.382 kb on - strand, within MMJJ_RS00800 at 152.382 kb on - strand, within MMJJ_RS00800 at 152.400 kb on + strand, within MMJJ_RS00800 at 152.424 kb on - strand, within MMJJ_RS00800 at 152.430 kb on + strand, within MMJJ_RS00800 at 152.436 kb on - strand, within MMJJ_RS00800 at 152.442 kb on + strand, within MMJJ_RS00800 at 152.445 kb on - strand, within MMJJ_RS00800 at 152.445 kb on - strand, within MMJJ_RS00800 at 152.449 kb on + strand, within MMJJ_RS00800 at 152.478 kb on - strand, within MMJJ_RS00800 at 152.478 kb on - strand, within MMJJ_RS00800 at 152.478 kb on - strand, within MMJJ_RS00800 at 152.478 kb on - strand, within MMJJ_RS00800 at 152.478 kb on - strand, within MMJJ_RS00800 at 152.479 kb on + strand, within MMJJ_RS00800 at 152.623 kb on + strand at 152.665 kb on + strand at 152.727 kb on + strand at 152.769 kb on + strand at 152.779 kb on - strand at 152.780 kb on + strand at 152.780 kb on + strand at 152.796 kb on + strand at 152.885 kb on + strand, within MMJJ_RS00805 at 152.936 kb on - strand, within MMJJ_RS00805 at 152.937 kb on + strand, within MMJJ_RS00805 at 152.937 kb on + strand, within MMJJ_RS00805 at 152.937 kb on + strand, within MMJJ_RS00805 at 152.947 kb on - strand, within MMJJ_RS00805 at 152.948 kb on + strand, within MMJJ_RS00805 at 152.970 kb on + strand, within MMJJ_RS00805 at 152.970 kb on + strand, within MMJJ_RS00805 at 153.071 kb on + strand, within MMJJ_RS00805 at 153.185 kb on - strand, within MMJJ_RS00805 at 153.185 kb on - strand, within MMJJ_RS00805 at 153.185 kb on - strand, within MMJJ_RS00805 at 153.186 kb on + strand, within MMJJ_RS00805 at 153.186 kb on + strand, within MMJJ_RS00805 at 153.189 kb on + strand, within MMJJ_RS00805 at 153.189 kb on + strand, within MMJJ_RS00805 at 153.223 kb on + strand, within MMJJ_RS00805 at 153.289 kb on - strand, within MMJJ_RS00805 at 153.294 kb on - strand, within MMJJ_RS00805 at 153.295 kb on + strand, within MMJJ_RS00805 at 153.295 kb on + strand, within MMJJ_RS00805 at 153.295 kb on + strand, within MMJJ_RS00805 at 153.295 kb on + strand, within MMJJ_RS00805 at 153.364 kb on - strand, within MMJJ_RS00805 at 153.390 kb on - strand, within MMJJ_RS00805 at 153.390 kb on - strand, within MMJJ_RS00805 at 153.434 kb on + strand, within MMJJ_RS00805 at 153.449 kb on - strand, within MMJJ_RS00805 at 153.452 kb on - strand, within MMJJ_RS00805 at 153.452 kb on - strand, within MMJJ_RS00805 at 153.453 kb on + strand, within MMJJ_RS00805 at 153.537 kb on - strand, within MMJJ_RS00805 at 153.537 kb on - strand, within MMJJ_RS00805 at 153.538 kb on + strand, within MMJJ_RS00805 at 153.538 kb on + strand, within MMJJ_RS00805 at 153.559 kb on - strand, within MMJJ_RS00805 at 153.560 kb on + strand, within MMJJ_RS00805 at 153.602 kb on - strand at 153.602 kb on - strand at 153.603 kb on + strand at 153.603 kb on + strand at 153.603 kb on + strand at 153.604 kb on - strand at 153.618 kb on - strand at 153.620 kb on - strand at 153.621 kb on + strand at 153.621 kb on + strand at 153.658 kb on + strand at 153.661 kb on - strand at 153.661 kb on - strand at 153.662 kb on + strand at 153.673 kb on - strand at 153.673 kb on - strand at 153.673 kb on - strand at 153.677 kb on + strand at 153.680 kb on - strand at 153.690 kb on + strand at 153.720 kb on + strand at 153.780 kb on - strand, within MMJJ_RS00810 at 153.780 kb on - strand, within MMJJ_RS00810 at 153.781 kb on + strand, within MMJJ_RS00810 at 153.781 kb on + strand, within MMJJ_RS00810 at 153.812 kb on - strand, within MMJJ_RS00810 at 153.833 kb on - strand, within MMJJ_RS00810 at 153.834 kb on + strand, within MMJJ_RS00810 at 153.843 kb on - strand, within MMJJ_RS00810 at 153.856 kb on - strand, within MMJJ_RS00810 at 153.962 kb on - strand, within MMJJ_RS00810 at 153.962 kb on - strand, within MMJJ_RS00810 at 153.963 kb on + strand, within MMJJ_RS00810 at 154.021 kb on - strand, within MMJJ_RS00810 at 154.041 kb on + strand, within MMJJ_RS00810 at 154.041 kb on + strand, within MMJJ_RS00810 at 154.047 kb on + strand, within MMJJ_RS00810 at 154.054 kb on - strand, within MMJJ_RS00810 at 154.055 kb on + strand, within MMJJ_RS00810 at 154.061 kb on - strand, within MMJJ_RS00810 at 154.062 kb on + strand, within MMJJ_RS00810 at 154.076 kb on - strand, within MMJJ_RS00810 at 154.082 kb on + strand, within MMJJ_RS00810 at 154.109 kb on + strand, within MMJJ_RS00810 at 154.121 kb on + strand, within MMJJ_RS00810 at 154.127 kb on + strand, within MMJJ_RS00810 at 154.130 kb on - strand, within MMJJ_RS00810 at 154.131 kb on + strand, within MMJJ_RS00810 at 154.131 kb on + strand, within MMJJ_RS00810 at 154.211 kb on - strand, within MMJJ_RS00810 at 154.229 kb on - strand, within MMJJ_RS00810 at 154.230 kb on + strand, within MMJJ_RS00810 at 154.284 kb on + strand, within MMJJ_RS00810 at 154.284 kb on + strand, within MMJJ_RS00810 at 154.337 kb on - strand, within MMJJ_RS00810 at 154.407 kb on - strand, within MMJJ_RS00810 at 154.409 kb on - strand, within MMJJ_RS00810 at 154.409 kb on - strand, within MMJJ_RS00810 at 154.410 kb on + strand, within MMJJ_RS00810 at 154.410 kb on + strand, within MMJJ_RS00810 at 154.432 kb on - strand, within MMJJ_RS00810 at 154.481 kb on - strand, within MMJJ_RS00810 at 154.482 kb on + strand, within MMJJ_RS00810 at 154.506 kb on + strand at 154.517 kb on - strand at 154.518 kb on + strand at 154.520 kb on + strand at 154.553 kb on - strand at 154.554 kb on + strand at 154.576 kb on - strand at 154.586 kb on - strand at 154.607 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction McCas_formate_complete Antimycin A 0.01 mM remove 151,908 + MMJJ_RS00800 0.37 -0.7 151,913 + MMJJ_RS00800 0.37 +0.7 151,915 - MMJJ_RS00800 0.38 +1.1 151,915 - MMJJ_RS00800 0.38 -1.0 151,915 - MMJJ_RS00800 0.38 -3.7 151,915 - MMJJ_RS00800 0.38 +0.4 151,916 + MMJJ_RS00800 0.38 -0.4 151,916 + MMJJ_RS00800 0.38 -3.4 151,916 + MMJJ_RS00800 0.38 -2.8 151,916 + MMJJ_RS00800 0.38 +1.8 151,923 - MMJJ_RS00800 0.38 +5.5 151,924 + MMJJ_RS00800 0.38 +1.0 151,924 + MMJJ_RS00800 0.38 -2.8 151,938 - MMJJ_RS00800 0.39 -1.5 151,938 - MMJJ_RS00800 0.39 -2.1 151,957 + MMJJ_RS00800 0.41 -1.4 151,985 - MMJJ_RS00800 0.43 +1.5 151,986 + MMJJ_RS00800 0.43 -0.5 151,986 + MMJJ_RS00800 0.43 -2.5 151,987 - MMJJ_RS00800 0.43 +0.1 151,987 - MMJJ_RS00800 0.43 +1.3 151,987 - MMJJ_RS00800 0.43 -2.4 151,987 - MMJJ_RS00800 0.43 +1.2 151,988 + MMJJ_RS00800 0.43 +1.5 151,988 + MMJJ_RS00800 0.43 +1.3 151,988 + MMJJ_RS00800 0.43 -1.5 151,988 + MMJJ_RS00800 0.43 +0.8 151,988 + MMJJ_RS00800 0.43 -0.6 151,988 + MMJJ_RS00800 0.43 +0.3 151,994 + MMJJ_RS00800 0.44 -2.0 152,097 - MMJJ_RS00800 0.52 +1.7 152,098 + MMJJ_RS00800 0.52 +1.9 152,098 + MMJJ_RS00800 0.52 +1.9 152,098 + MMJJ_RS00800 0.52 -1.6 152,101 - MMJJ_RS00800 0.52 +1.2 152,101 - MMJJ_RS00800 0.52 +1.2 152,101 - MMJJ_RS00800 0.52 -1.1 152,113 - MMJJ_RS00800 0.53 -0.6 152,116 - MMJJ_RS00800 0.53 +4.4 152,116 - MMJJ_RS00800 0.53 +1.3 152,117 + MMJJ_RS00800 0.53 +1.0 152,157 - MMJJ_RS00800 0.56 +1.1 152,158 + MMJJ_RS00800 0.56 -1.8 152,171 - MMJJ_RS00800 0.57 -2.7 152,172 + MMJJ_RS00800 0.57 +1.0 152,174 - MMJJ_RS00800 0.57 +2.7 152,175 + MMJJ_RS00800 0.58 +3.2 152,175 + MMJJ_RS00800 0.58 -0.5 152,175 + MMJJ_RS00800 0.58 -2.1 152,193 + MMJJ_RS00800 0.59 -0.8 152,217 + MMJJ_RS00800 0.61 -1.1 152,221 - MMJJ_RS00800 0.61 -1.3 152,222 + MMJJ_RS00800 0.61 +0.2 152,232 - MMJJ_RS00800 0.62 -1.3 152,252 - MMJJ_RS00800 0.63 -3.3 152,253 + MMJJ_RS00800 0.64 -2.0 152,293 + MMJJ_RS00800 0.67 +0.9 152,324 + MMJJ_RS00800 0.69 -1.5 152,352 - MMJJ_RS00800 0.71 +1.5 152,368 + MMJJ_RS00800 0.72 +1.4 152,368 + MMJJ_RS00800 0.72 -3.8 152,372 - MMJJ_RS00800 0.73 -0.4 152,373 + MMJJ_RS00800 0.73 +4.0 152,379 - MMJJ_RS00800 0.73 -1.8 152,379 - MMJJ_RS00800 0.73 +0.0 152,379 - MMJJ_RS00800 0.73 +4.2 152,382 - MMJJ_RS00800 0.73 +0.1 152,382 - MMJJ_RS00800 0.73 +0.7 152,400 + MMJJ_RS00800 0.75 +1.7 152,424 - MMJJ_RS00800 0.77 +1.5 152,430 + MMJJ_RS00800 0.77 -0.8 152,436 - MMJJ_RS00800 0.78 +1.0 152,442 + MMJJ_RS00800 0.78 -0.5 152,445 - MMJJ_RS00800 0.78 +0.5 152,445 - MMJJ_RS00800 0.78 +1.3 152,449 + MMJJ_RS00800 0.79 +0.6 152,478 - MMJJ_RS00800 0.81 -2.0 152,478 - MMJJ_RS00800 0.81 +1.0 152,478 - MMJJ_RS00800 0.81 +0.0 152,478 - MMJJ_RS00800 0.81 -0.5 152,478 - MMJJ_RS00800 0.81 -0.3 152,479 + MMJJ_RS00800 0.81 +3.1 152,623 + -2.2 152,665 + -3.4 152,727 + +0.9 152,769 + +2.6 152,779 - +0.4 152,780 + +0.1 152,780 + -0.7 152,796 + -1.3 152,885 + MMJJ_RS00805 0.10 +1.0 152,936 - MMJJ_RS00805 0.16 +1.4 152,937 + MMJJ_RS00805 0.16 -1.2 152,937 + MMJJ_RS00805 0.16 -0.7 152,937 + MMJJ_RS00805 0.16 +0.4 152,947 - MMJJ_RS00805 0.17 +3.7 152,948 + MMJJ_RS00805 0.18 -0.1 152,970 + MMJJ_RS00805 0.20 +3.3 152,970 + MMJJ_RS00805 0.20 -3.1 153,071 + MMJJ_RS00805 0.32 -0.5 153,185 - MMJJ_RS00805 0.45 +0.8 153,185 - MMJJ_RS00805 0.45 +0.3 153,185 - MMJJ_RS00805 0.45 +0.2 153,186 + MMJJ_RS00805 0.45 -2.1 153,186 + MMJJ_RS00805 0.45 -0.8 153,189 + MMJJ_RS00805 0.45 -2.0 153,189 + MMJJ_RS00805 0.45 -1.8 153,223 + MMJJ_RS00805 0.49 +0.8 153,289 - MMJJ_RS00805 0.57 -1.6 153,294 - MMJJ_RS00805 0.58 +1.0 153,295 + MMJJ_RS00805 0.58 -2.8 153,295 + MMJJ_RS00805 0.58 -1.0 153,295 + MMJJ_RS00805 0.58 -0.9 153,295 + MMJJ_RS00805 0.58 -1.7 153,364 - MMJJ_RS00805 0.66 -2.7 153,390 - MMJJ_RS00805 0.69 -3.1 153,390 - MMJJ_RS00805 0.69 +3.0 153,434 + MMJJ_RS00805 0.74 -0.6 153,449 - MMJJ_RS00805 0.76 -2.1 153,452 - MMJJ_RS00805 0.76 -2.0 153,452 - MMJJ_RS00805 0.76 +1.3 153,453 + MMJJ_RS00805 0.76 -0.9 153,537 - MMJJ_RS00805 0.86 +0.7 153,537 - MMJJ_RS00805 0.86 +2.0 153,538 + MMJJ_RS00805 0.86 -1.7 153,538 + MMJJ_RS00805 0.86 +1.3 153,559 - MMJJ_RS00805 0.88 -2.9 153,560 + MMJJ_RS00805 0.88 -0.9 153,602 - -0.1 153,602 - +2.9 153,603 + -1.8 153,603 + -3.5 153,603 + -0.6 153,604 - +1.4 153,618 - -0.6 153,620 - +0.5 153,621 + +2.7 153,621 + -2.3 153,658 + +0.8 153,661 - -0.1 153,661 - -3.4 153,662 + +0.4 153,673 - -0.1 153,673 - -2.1 153,673 - -1.0 153,677 + +2.1 153,680 - +0.5 153,690 + -2.1 153,720 + +0.0 153,780 - MMJJ_RS00810 0.13 -2.4 153,780 - MMJJ_RS00810 0.13 -1.6 153,781 + MMJJ_RS00810 0.13 -1.1 153,781 + MMJJ_RS00810 0.13 +1.0 153,812 - MMJJ_RS00810 0.16 -1.3 153,833 - MMJJ_RS00810 0.18 +1.3 153,834 + MMJJ_RS00810 0.19 -1.7 153,843 - MMJJ_RS00810 0.20 -1.2 153,856 - MMJJ_RS00810 0.21 +1.3 153,962 - MMJJ_RS00810 0.33 +1.0 153,962 - MMJJ_RS00810 0.33 +3.0 153,963 + MMJJ_RS00810 0.33 +2.2 154,021 - MMJJ_RS00810 0.39 +1.5 154,041 + MMJJ_RS00810 0.41 +3.7 154,041 + MMJJ_RS00810 0.41 +0.5 154,047 + MMJJ_RS00810 0.42 -1.0 154,054 - MMJJ_RS00810 0.43 -1.1 154,055 + MMJJ_RS00810 0.43 -1.6 154,061 - MMJJ_RS00810 0.44 +1.3 154,062 + MMJJ_RS00810 0.44 -2.8 154,076 - MMJJ_RS00810 0.45 +0.9 154,082 + MMJJ_RS00810 0.46 +1.4 154,109 + MMJJ_RS00810 0.49 +2.4 154,121 + MMJJ_RS00810 0.50 -2.7 154,127 + MMJJ_RS00810 0.51 -0.4 154,130 - MMJJ_RS00810 0.51 +1.2 154,131 + MMJJ_RS00810 0.51 +3.0 154,131 + MMJJ_RS00810 0.51 +1.0 154,211 - MMJJ_RS00810 0.60 -0.8 154,229 - MMJJ_RS00810 0.62 -2.5 154,230 + MMJJ_RS00810 0.62 -2.3 154,284 + MMJJ_RS00810 0.68 -1.1 154,284 + MMJJ_RS00810 0.68 +0.3 154,337 - MMJJ_RS00810 0.74 +4.1 154,407 - MMJJ_RS00810 0.82 -0.1 154,409 - MMJJ_RS00810 0.82 +0.8 154,409 - MMJJ_RS00810 0.82 +1.8 154,410 + MMJJ_RS00810 0.82 +0.4 154,410 + MMJJ_RS00810 0.82 +0.8 154,432 - MMJJ_RS00810 0.84 +1.2 154,481 - MMJJ_RS00810 0.90 -1.3 154,482 + MMJJ_RS00810 0.90 +2.8 154,506 + +1.4 154,517 - -0.8 154,518 + -4.3 154,520 + -0.7 154,553 - +0.0 154,554 + -2.1 154,576 - -0.7 154,586 - -0.9 154,607 - +0.8
Or see this region's nucleotide sequence