Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS00580

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
107,316	-				+0.1
107,316	-				-0.5
107,329	-				+1.1
107,329	-				-1.3
107,330	+				+1.1
107,330	+				-0.9
107,331	-				-2.3
107,331	-				+0.8
107,332	+				-0.9
107,332	+				-2.1
107,337	+				-2.2
107,347	-				+0.2
107,359	-				-2.6
107,359	-				-1.8
107,359	-				-0.6
107,368	-				-0.6
107,369	+				+3.1
107,369	+				+0.1
107,382	+				+1.8
107,383	-				-2.6
107,454	-				-1.7
108,022	+				+1.1
108,054	-		MMJJ_RS00575	0.78	+0.1
108,066	-		MMJJ_RS00575	0.79	-1.7
108,142	-		MMJJ_RS00575	0.88	+1.4
108,179	+				-1.3
108,239	-				-1.9
108,264	+				-0.5
108,606	-		MMJJ_RS00580	0.32	+1.1
109,052	+		MMJJ_RS00580	0.74	-2.5
109,065	+		MMJJ_RS00580	0.76	-0.7
109,270	+				-0.7
109,316	-				-2.9
109,317	+				+0.4
109,321	+				+4.0
109,347	-				-2.2
109,371	+				+0.3
109,431	-				-3.9
109,476	+				+1.1
109,648	+		MMJJ_RS00585	0.19	+1.6
109,656	-		MMJJ_RS00585	0.20	-2.4
109,657	+		MMJJ_RS00585	0.20	+1.0
109,675	+		MMJJ_RS00585	0.21	-0.5
109,793	-		MMJJ_RS00585	0.28	+1.2
109,800	-		MMJJ_RS00585	0.28	+2.1
109,863	+		MMJJ_RS00585	0.32	-1.7
109,874	-		MMJJ_RS00585	0.33	+1.5
109,874	-		MMJJ_RS00585	0.33	+2.7
109,874	-		MMJJ_RS00585	0.33	+0.6
109,874	-		MMJJ_RS00585	0.33	-2.6
109,875	+		MMJJ_RS00585	0.33	-2.8
109,875	+		MMJJ_RS00585	0.33	+1.1
109,875	+		MMJJ_RS00585	0.33	-2.5
109,875	+		MMJJ_RS00585	0.33	+0.7
109,876	-		MMJJ_RS00585	0.33	+0.5
109,881	-		MMJJ_RS00585	0.33	+2.0
109,886	-		MMJJ_RS00585	0.34	+1.2
109,887	+		MMJJ_RS00585	0.34	+1.0
109,889	-		MMJJ_RS00585	0.34	-1.7
109,893	+		MMJJ_RS00585	0.34	+2.6
109,910	+		MMJJ_RS00585	0.35	+0.5
109,928	-		MMJJ_RS00585	0.36	-1.7
109,929	+		MMJJ_RS00585	0.36	+2.7
109,931	+		MMJJ_RS00585	0.36	-1.2
109,971	-		MMJJ_RS00585	0.39	+1.9
110,073	-		MMJJ_RS00585	0.45	-0.2
110,074	+		MMJJ_RS00585	0.45	+2.1
110,084	-		MMJJ_RS00585	0.46	+2.5
110,149	+		MMJJ_RS00585	0.50	+2.8
110,149	+		MMJJ_RS00585	0.50	+0.2
110,149	+		MMJJ_RS00585	0.50	+0.9
110,149	+		MMJJ_RS00585	0.50	+1.1
110,153	-		MMJJ_RS00585	0.50	-1.6
110,189	-		MMJJ_RS00585	0.52	-0.5
110,189	-		MMJJ_RS00585	0.52	-3.3
110,190	+		MMJJ_RS00585	0.52	+2.1
110,190	+		MMJJ_RS00585	0.52	-3.0
110,190	+		MMJJ_RS00585	0.52	+3.5
110,192	+		MMJJ_RS00585	0.52	-0.5
110,192	+		MMJJ_RS00585	0.52	-0.6
110,207	-		MMJJ_RS00585	0.53	-2.6
110,208	+		MMJJ_RS00585	0.53	+1.9
110,211	-		MMJJ_RS00585	0.53	+0.0
110,264	-		MMJJ_RS00585	0.57	-2.2
110,265	+		MMJJ_RS00585	0.57	-0.7
110,270	-		MMJJ_RS00585	0.57	+4.5