Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS00190

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
35,588	+		MMJJ_RS00185	0.59	-0.9
36,008	-				-0.5
36,018	-				+0.1
36,023	+				-0.4
36,023	+				+2.2
36,035	-				+2.2
36,042	-				+0.2
36,045	-				+1.8
36,045	-				-2.6
36,046	+				+0.5
36,102	-				+1.1
36,106	-				-1.9
36,124	-				-0.8
36,132	+				+1.1
36,132	+				-1.7
36,141	-				+3.3
36,142	+				-1.7
36,142	+				-1.3
36,183	-				-0.5
36,197	-				-1.5
36,197	-				+1.9
36,199	-				-0.1
36,200	+				-0.3
36,200	+				-0.9
36,200	+				-1.8
36,212	-				-0.5
36,212	-				-1.6
36,212	-				+1.0
36,212	-				+0.5
36,212	-				+1.5
36,212	-				-1.7
36,213	+				+0.1
36,213	+				+1.1
36,213	+				-1.3
36,213	+				+0.8
36,216	-				+1.0
36,217	+				-1.9
36,217	+				-1.1
36,218	-				-1.5
36,218	-				-2.6
36,218	-				+1.2
36,219	+				+3.3
36,226	-				-0.5
36,226	-				-0.4
36,270	-				+4.3
36,270	-				+2.2
36,274	-				+2.2
36,274	-				-0.7
36,274	-				-0.2
36,274	-				-1.5
36,274	-				+2.3
36,275	+				+0.7
36,277	+				+1.3
36,277	+				+0.8
36,278	-				-1.5
36,281	-				+0.3
36,282	+				-1.9
36,289	-				-0.3
36,289	-				-1.5
36,291	-				+0.3
36,291	-				+1.1
36,291	-				+0.1
36,291	-				-2.4
36,291	-				+0.2
36,291	-				+0.2
36,292	+				+0.1
36,292	+				+3.5
36,296	-				-2.8
36,301	+				-2.1
36,319	-				-0.5
36,320	+				+3.7
36,333	+				+1.3
36,335	-				-0.9
36,337	-				-1.4
36,338	+				+0.1
36,340	+				+1.7
36,340	+				+1.7
36,345	+				-1.7
36,364	+				+1.2
36,365	-				-1.5
36,369	+				-2.3
36,386	-				-2.2
36,387	+				+1.1
36,387	+				-1.3
36,388	-				+2.2
36,389	+				+1.9
36,393	-				+1.1
36,394	+				+0.5
36,398	+				-2.5
36,398	+				-0.5
36,400	-				+0.2
36,409	-				+0.1
36,413	-				-4.1
36,414	+				+0.1
36,415	-				-1.8
36,415	-				-0.6
36,415	-				+0.7
36,415	-				+1.1
36,415	-				-0.5
36,415	-				-0.5
36,415	-				+1.2
36,416	+				+1.2
36,416	+				+3.3
36,416	+				-0.8
36,416	+				+0.9
36,416	+				-0.1
36,416	+				+2.5
36,416	+				-1.2
36,419	-				-0.1
36,428	-				-1.9
36,428	-				-1.7
36,429	+				+0.5
36,431	-				+0.4
36,431	-				-0.8
36,431	-				+0.3
36,432	+				+0.3
36,432	+				-1.1
36,435	-				-0.2
36,436	+				-2.0
36,436	+				-2.6
36,437	-				+0.3
36,437	-				+5.0
36,437	-				+0.8
36,437	-				-3.4
36,437	-				-2.3
36,437	-				-3.2
36,438	+				-1.7
36,438	+				+2.0
36,438	+				+3.2
36,453	-				+1.7
36,454	+				+2.2
36,454	+				+1.8
36,456	-				-1.6
36,456	-				-1.1
36,456	-				+0.3
36,457	+				+0.5
36,457	+				-3.9
36,457	+				+0.3
36,457	+				-1.1
36,457	+				-2.7
36,460	-				-1.1
36,460	-				-1.6
36,460	-				-0.5
36,460	-				-2.6
36,461	+				+1.4
36,461	+				-2.9
36,461	+				-3.2
36,461	+				-0.9
36,461	+				-1.6
36,461	+				+0.6
36,471	+				+3.1
36,483	+				-0.9
36,483	+				+1.1
36,534	-				-1.2
36,566	+		MMJJ_RS00190	0.14	+1.1
36,574	+		MMJJ_RS00190	0.15	-1.7
36,585	-		MMJJ_RS00190	0.18	-2.3
36,585	-		MMJJ_RS00190	0.18	-2.7
36,586	+		MMJJ_RS00190	0.18	-1.5
36,587	-		MMJJ_RS00190	0.18	-0.6
36,587	-		MMJJ_RS00190	0.18	-1.4
36,624	-		MMJJ_RS00190	0.26	-0.5
36,624	-		MMJJ_RS00190	0.26	-3.8
36,625	+		MMJJ_RS00190	0.26	-1.4
36,630	-		MMJJ_RS00190	0.27	+0.9
36,632	-		MMJJ_RS00190	0.28	+0.5
36,633	+		MMJJ_RS00190	0.28	+0.8
36,646	-		MMJJ_RS00190	0.31	-1.9
36,671	-		MMJJ_RS00190	0.36	-2.7
36,672	+		MMJJ_RS00190	0.36	+1.7
36,673	-		MMJJ_RS00190	0.36	-2.8
36,701	+		MMJJ_RS00190	0.42	+2.4
36,881	-		MMJJ_RS00190	0.80	+1.4
36,889	+		MMJJ_RS00190	0.82	-3.6
36,909	+		MMJJ_RS00190	0.86	-1.3
36,909	+		MMJJ_RS00190	0.86	+0.4
36,910	-		MMJJ_RS00190	0.86	+1.1
36,911	+		MMJJ_RS00190	0.86	-1.5
36,915	+		MMJJ_RS00190	0.87	+3.4
36,961	-				-0.9
36,962	+				+2.7
37,013	-				-0.5
37,013	-				-0.9
37,013	-				-1.8
37,017	-				-2.1
37,017	-				+2.3
37,017	-				+0.4
37,019	-				-1.3
37,020	+				-2.3
37,020	+				-0.4
37,020	+				-3.4
37,021	-				-0.5
37,022	+				-1.5
37,034	-				+0.5
37,034	-				-0.1
37,035	+				+0.3
37,035	+				-0.2
37,035	+				-1.5
37,035	+				+1.4
37,036	-				-4.0
37,037	+				+1.5
37,037	+				-2.5
37,037	+				-1.3
37,037	+				+1.3
37,049	-				-2.5
37,050	+				-1.9
37,052	-				+2.7
37,053	+				+1.9
37,053	+				+2.1
37,053	+				-0.9
37,076	-				+1.1
37,076	-				+0.5
37,076	-				+2.4
37,096	-				+1.3
37,107	-				-1.9
37,107	-				-0.2
37,108	+				-0.7
37,176	+				+1.8
37,189	+				-1.8
37,198	-				+0.3
37,201	-				+0.5
37,202	+				-0.5
37,204	+				+0.1
37,214	+				+3.1
37,240	+				+1.9
37,269	-				-2.1
37,270	+				-1.5
37,346	+		MMJJ_RS00195	0.11	-1.3
37,352	+		MMJJ_RS00195	0.12	-0.5
37,401	-		MMJJ_RS00195	0.18	-0.5
37,501	-				+1.1
37,502	+		MMJJ_RS00195	0.32	+0.5
37,502	+		MMJJ_RS00195	0.32	-0.3
37,504	+		MMJJ_RS00195	0.32	+1.1
37,532	+				+2.1
37,571	+		MMJJ_RS00195	0.41	+1.1
37,571	+		MMJJ_RS00195	0.41	+2.1
37,606	-		MMJJ_RS00195	0.46	-1.5
37,606	-				+0.1
37,809	+				+0.1
37,908	+		MMJJ_RS00195	0.86	-1.8