Strain Fitness in Pantoea sp. MT58 around IAI47_14595

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,076,645	+		IAI47_14590	0.44	-2.1
3,076,645	+		IAI47_14590	0.44	+0.8
3,076,645	+		IAI47_14590	0.44	+0.4
3,076,645	+		IAI47_14590	0.44	-2.5
3,076,658	+		IAI47_14590	0.45	-1.1
3,076,658	+		IAI47_14590	0.45	+0.1
3,076,658	+		IAI47_14590	0.45	+0.7
3,076,658	+		IAI47_14590	0.45	-1.0
3,076,659	-		IAI47_14590	0.45	+0.4
3,076,659	-		IAI47_14590	0.45	-1.1
3,076,659	-		IAI47_14590	0.45	+0.4
3,076,679	+		IAI47_14590	0.46	-2.0
3,076,680	-		IAI47_14590	0.46	-1.8
3,076,680	-		IAI47_14590	0.46	-0.7
3,076,680	-		IAI47_14590	0.46	-0.3
3,076,680	-		IAI47_14590	0.46	-1.3
3,076,762	+		IAI47_14590	0.51	-1.2
3,076,762	+		IAI47_14590	0.51	-2.3
3,076,763	-		IAI47_14590	0.51	+0.4
3,076,766	+		IAI47_14590	0.51	-0.2
3,076,766	+		IAI47_14590	0.51	-2.0
3,076,766	+		IAI47_14590	0.51	-1.2
3,076,766	+		IAI47_14590	0.51	+0.1
3,076,766	+		IAI47_14590	0.51	-1.5
3,076,766	+		IAI47_14590	0.51	+0.1
3,076,766	+		IAI47_14590	0.51	-1.4
3,076,766	+		IAI47_14590	0.51	-3.1
3,076,766	+		IAI47_14590	0.51	-1.6
3,076,766	+		IAI47_14590	0.51	-1.2
3,076,766	+		IAI47_14590	0.51	-2.4
3,076,767	-		IAI47_14590	0.51	+0.4
3,076,767	-		IAI47_14590	0.51	-0.4
3,076,767	-		IAI47_14590	0.51	+0.6
3,076,767	-		IAI47_14590	0.51	-2.0
3,076,767	-		IAI47_14590	0.51	+1.4
3,076,767	-		IAI47_14590	0.51	-1.2
3,076,767	-		IAI47_14590	0.51	-0.3
3,076,769	+		IAI47_14590	0.51	-2.1
3,076,769	+		IAI47_14590	0.51	-1.6
3,076,769	+		IAI47_14590	0.51	-0.1
3,076,770	-		IAI47_14590	0.52	-1.4
3,076,770	-		IAI47_14590	0.52	+0.0
3,076,770	-		IAI47_14590	0.52	-3.0
3,076,777	+		IAI47_14590	0.52	+0.9
3,076,777	+		IAI47_14590	0.52	-1.1
3,076,777	+		IAI47_14590	0.52	-0.6
3,076,777	+		IAI47_14590	0.52	+0.4
3,076,777	+		IAI47_14590	0.52	-1.4
3,076,778	-		IAI47_14590	0.52	-0.4
3,076,778	-		IAI47_14590	0.52	-2.7
3,076,778	-		IAI47_14590	0.52	-1.2
3,076,778	-		IAI47_14590	0.52	-0.1
3,076,778	-		IAI47_14590	0.52	-0.7
3,076,778	-		IAI47_14590	0.52	+0.5
3,076,778	-		IAI47_14590	0.52	-0.7
3,076,778	-		IAI47_14590	0.52	-1.3
3,076,778	-		IAI47_14590	0.52	-2.2
3,076,778	-		IAI47_14590	0.52	+0.8
3,076,778	-		IAI47_14590	0.52	-1.1
3,076,842	+		IAI47_14590	0.56	+1.4
3,076,842	+		IAI47_14590	0.56	-2.1
3,076,843	-		IAI47_14590	0.56	+0.3
3,076,843	-		IAI47_14590	0.56	-1.0
3,076,843	-		IAI47_14590	0.56	+1.4
3,076,918	+		IAI47_14590	0.60	-1.0
3,076,918	+		IAI47_14590	0.60	+0.9
3,076,943	+		IAI47_14590	0.61	-1.7
3,076,943	+		IAI47_14590	0.61	+1.4
3,076,944	-		IAI47_14590	0.61	+0.4
3,077,009	+		IAI47_14590	0.65	-1.1
3,077,009	+		IAI47_14590	0.65	-2.2
3,077,010	-		IAI47_14590	0.65	-1.3
3,077,010	-		IAI47_14590	0.65	-0.4
3,077,021	+		IAI47_14590	0.66	-0.4
3,077,021	+		IAI47_14590	0.66	+0.8
3,077,021	+		IAI47_14590	0.66	+0.8
3,077,022	-		IAI47_14590	0.66	-1.4
3,077,022	-		IAI47_14590	0.66	+0.4
3,077,022	-		IAI47_14590	0.66	-0.1
3,077,022	-		IAI47_14590	0.66	-1.1
3,077,035	+		IAI47_14590	0.66	+1.6
3,077,035	+		IAI47_14590	0.66	-0.9
3,077,035	+		IAI47_14590	0.66	-1.4
3,077,035	+		IAI47_14590	0.66	-1.4
3,077,036	-		IAI47_14590	0.66	-1.0
3,077,036	-		IAI47_14590	0.66	-2.5
3,077,039	+		IAI47_14590	0.67	+0.8
3,077,039	+		IAI47_14590	0.67	-1.0
3,077,039	+		IAI47_14590	0.67	-0.2
3,077,039	+		IAI47_14590	0.67	-1.9
3,077,039	+		IAI47_14590	0.67	+0.6
3,077,039	+		IAI47_14590	0.67	-2.0
3,077,040	-		IAI47_14590	0.67	+0.3
3,077,040	-		IAI47_14590	0.67	+2.2
3,077,040	-		IAI47_14590	0.67	+0.4
3,077,040	-		IAI47_14590	0.67	+1.0
3,077,040	-		IAI47_14590	0.67	-0.1
3,077,040	-		IAI47_14590	0.67	-2.0
3,077,069	-		IAI47_14590	0.68	+0.7
3,077,077	+		IAI47_14590	0.69	-1.8
3,077,077	+		IAI47_14590	0.69	-0.0
3,077,078	-		IAI47_14590	0.69	+0.6
3,077,078	-		IAI47_14590	0.69	+0.5
3,077,078	-				+1.8
3,077,081	+		IAI47_14590	0.69	+1.3
3,077,081	+		IAI47_14590	0.69	-0.8
3,077,081	+		IAI47_14590	0.69	+2.6
3,077,081	+		IAI47_14590	0.69	-1.5
3,077,081	+		IAI47_14590	0.69	+0.0
3,077,081	+		IAI47_14590	0.69	-0.5
3,077,081	+		IAI47_14590	0.69	-0.8
3,077,082	-		IAI47_14590	0.69	-2.1
3,077,082	-		IAI47_14590	0.69	-2.4
3,077,082	-		IAI47_14590	0.69	+2.3
3,077,082	-		IAI47_14590	0.69	-0.4
3,077,082	-		IAI47_14590	0.69	+1.5
3,077,091	+		IAI47_14590	0.70	+0.2
3,077,091	+		IAI47_14590	0.70	-0.2
3,077,091	+		IAI47_14590	0.70	+0.1
3,077,092	-		IAI47_14590	0.70	+2.5
3,077,092	-		IAI47_14590	0.70	-0.5
3,077,092	-		IAI47_14590	0.70	-0.4
3,077,092	-		IAI47_14590	0.70	-2.2
3,077,092	-		IAI47_14590	0.70	-0.8
3,077,092	-		IAI47_14590	0.70	+0.7
3,077,097	+		IAI47_14590	0.70	-1.4
3,077,097	+		IAI47_14590	0.70	-2.1
3,077,132	+		IAI47_14590	0.72	-1.1
3,077,132	+		IAI47_14590	0.72	-1.6
3,077,133	-		IAI47_14590	0.72	-1.2
3,077,157	+		IAI47_14590	0.73	-1.9
3,077,215	+		IAI47_14590	0.77	-0.4
3,077,216	-		IAI47_14590	0.77	-1.7
3,077,216	-		IAI47_14590	0.77	+1.8
3,077,279	+		IAI47_14590	0.80	-2.2
3,077,383	+		IAI47_14590	0.86	-2.7
3,077,383	+		IAI47_14590	0.86	-1.7
3,077,384	-		IAI47_14590	0.86	-0.5
3,077,477	+				+0.8
3,077,477	+				+2.4
3,077,478	-				-1.1
3,077,478	-				-0.9
3,077,478	-				-1.1
3,077,488	+				+0.4
3,077,488	+				-0.9
3,077,489	-				-1.4
3,077,489	-				-0.4
3,077,489	-				-0.4
3,077,582	-				+1.6
3,077,625	-				+3.3
3,077,684	+				+0.2
3,077,690	+				-0.4
3,077,690	+				+1.8
3,077,690	+				-1.6
3,077,691	-				-0.3
3,077,691	-				+0.2
3,077,691	-				-1.1
3,077,691	-				+2.2
3,077,691	-				-3.1
3,077,694	+				-0.2
3,077,694	+				+1.0
3,077,694	+				-1.1
3,077,694	+				-0.0
3,077,694	+				-1.9
3,077,694	+				+0.6
3,077,694	+				-0.6
3,077,695	-				-2.4
3,077,695	-				-0.8
3,077,695	-				-2.0
3,077,818	-		IAI47_14595	0.11	-1.2
3,077,818	-		IAI47_14595	0.11	-1.1
3,077,818	-		IAI47_14595	0.11	-0.4
3,077,853	+		IAI47_14595	0.13	-1.9
3,077,853	+		IAI47_14595	0.13	-0.7
3,077,853	+		IAI47_14595	0.13	-0.8
3,077,853	+		IAI47_14595	0.13	+2.3
3,077,854	-		IAI47_14595	0.13	+1.3
3,077,854	-		IAI47_14595	0.13	-1.5
3,077,854	-		IAI47_14595	0.13	-0.4
3,077,874	+		IAI47_14595	0.14	-0.2
3,077,874	+		IAI47_14595	0.14	-0.3
3,077,875	-		IAI47_14595	0.14	-1.8
3,077,875	-		IAI47_14595	0.14	-0.1
3,077,875	-		IAI47_14595	0.14	-1.8
3,078,031	-		IAI47_14595	0.23	-1.0
3,078,054	+		IAI47_14595	0.24	-1.2
3,078,054	+		IAI47_14595	0.24	-2.4
3,078,054	+		IAI47_14595	0.24	-0.0
3,078,054	+		IAI47_14595	0.24	-1.5
3,078,054	+		IAI47_14595	0.24	-1.3
3,078,054	+		IAI47_14595	0.24	-0.4
3,078,055	-		IAI47_14595	0.24	+0.2
3,078,055	-		IAI47_14595	0.24	-1.6
3,078,055	-		IAI47_14595	0.24	+0.1
3,078,055	-		IAI47_14595	0.24	-2.2
3,078,055	-		IAI47_14595	0.24	-1.7
3,078,055	-		IAI47_14595	0.24	-1.7
3,078,055	-		IAI47_14595	0.24	-2.1
3,078,055	-		IAI47_14595	0.24	-0.3
3,078,055	-		IAI47_14595	0.24	-0.3
3,078,067	+		IAI47_14595	0.25	-3.7
3,078,067	+		IAI47_14595	0.25	-0.2
3,078,067	+		IAI47_14595	0.25	-1.7
3,078,067	+		IAI47_14595	0.25	+0.3
3,078,067	+		IAI47_14595	0.25	-2.1
3,078,068	-		IAI47_14595	0.25	-0.0
3,078,105	+		IAI47_14595	0.27	+1.0
3,078,105	+		IAI47_14595	0.27	-0.2
3,078,105	+		IAI47_14595	0.27	+0.8
3,078,105	+		IAI47_14595	0.27	-0.4
3,078,105	+		IAI47_14595	0.27	-0.8
3,078,106	-		IAI47_14595	0.27	-0.4
3,078,106	-		IAI47_14595	0.27	-1.2
3,078,106	-		IAI47_14595	0.27	-3.6
3,078,106	-		IAI47_14595	0.27	+0.4
3,078,185	-		IAI47_14595	0.32	+0.4
3,078,330	+		IAI47_14595	0.40	-1.6
3,078,337	+		IAI47_14595	0.40	-0.5
3,078,337	+		IAI47_14595	0.40	+0.3
3,078,338	-		IAI47_14595	0.40	-2.2
3,078,410	-		IAI47_14595	0.44	-2.0
3,078,410	-		IAI47_14595	0.44	-0.8
3,078,417	+		IAI47_14595	0.45	-1.4
3,078,417	+		IAI47_14595	0.45	-0.6
3,078,417	+		IAI47_14595	0.45	-1.2
3,078,417	+		IAI47_14595	0.45	-1.6
3,078,418	-		IAI47_14595	0.45	-1.2
3,078,495	+		IAI47_14595	0.49	-1.2
3,078,496	-		IAI47_14595	0.49	+0.7
3,078,498	+		IAI47_14595	0.49	-1.9
3,078,499	-		IAI47_14595	0.49	-1.9
3,078,499	-		IAI47_14595	0.49	+1.0
3,078,499	-		IAI47_14595	0.49	-1.5
3,078,499	-		IAI47_14595	0.49	-1.9
3,078,499	-		IAI47_14595	0.49	-2.1
3,078,499	-		IAI47_14595	0.49	+1.8
3,078,545	+		IAI47_14595	0.52	-1.1
3,078,545	+		IAI47_14595	0.52	-2.1
3,078,546	-		IAI47_14595	0.52	+0.2
3,078,546	-		IAI47_14595	0.52	-3.1
3,078,546	-		IAI47_14595	0.52	-0.9
3,078,546	-		IAI47_14595	0.52	+0.1
3,078,647	+		IAI47_14595	0.58	-0.5
3,078,647	+		IAI47_14595	0.58	+1.7
3,078,647	+		IAI47_14595	0.58	-1.5
3,078,647	+		IAI47_14595	0.58	-0.8
3,078,647	+		IAI47_14595	0.58	+0.6
3,078,647	+		IAI47_14595	0.58	-1.4
3,078,647	+		IAI47_14595	0.58	-2.3
3,078,647	+		IAI47_14595	0.58	-0.3
3,078,648	-		IAI47_14595	0.58	+0.4
3,078,834	+		IAI47_14595	0.68	+1.2
3,078,835	-		IAI47_14595	0.68	-2.3
3,078,835	-		IAI47_14595	0.68	+1.0
3,078,882	+		IAI47_14595	0.71	-1.7
3,078,933	+		IAI47_14595	0.74	+0.3
3,078,934	-		IAI47_14595	0.74	+0.7
3,078,947	-		IAI47_14595	0.75	-0.5
3,079,070	+		IAI47_14595	0.82	-0.9
3,079,070	+		IAI47_14595	0.82	+1.4
3,079,136	+		IAI47_14595	0.85	-2.3
3,079,136	+		IAI47_14595	0.85	-2.0
3,079,137	-		IAI47_14595	0.86	-0.8
3,079,169	+		IAI47_14595	0.87	-0.0
3,079,169	+		IAI47_14595	0.87	+0.3
3,079,169	+		IAI47_14595	0.87	-3.7
3,079,170	-		IAI47_14595	0.87	-0.3
3,079,170	-		IAI47_14595	0.87	-0.4
3,079,170	-		IAI47_14595	0.87	-0.2
3,079,170	-		IAI47_14595	0.87	-1.5
3,079,181	+		IAI47_14595	0.88	-1.0
3,079,182	-		IAI47_14595	0.88	-2.4
3,079,255	+				+0.1
3,079,255	+				-2.3
3,079,255	+				+0.3
3,079,256	-				+0.3
3,079,256	-				-2.3
3,079,256	-				+0.8
3,079,279	+				-1.0
3,079,280	-				+0.6
3,079,280	-				-0.5
3,079,305	+				-0.3
3,079,305	+				-3.4
3,079,305	+				-0.6
3,079,305	+				+3.0
3,079,306	-				-1.0
3,079,306	-				-0.9
3,079,311	+				+0.7
3,079,311	+				-2.0
3,079,311	+				-1.1
3,079,311	+				-1.0
3,079,311	+				-2.0
3,079,311	+				-0.4
3,079,311	+				+1.1
3,079,311	+				-0.7
3,079,311	+				-2.5
3,079,312	-				-0.7
3,079,312	-				-0.8
3,079,318	-				+1.8
3,079,340	+				-0.1
3,079,364	+				-0.4
3,079,365	-				-1.1
3,079,365	-				-0.6
3,079,373	-				-1.9
3,079,433	-				+1.3
3,079,433	-				-1.4
3,079,445	+				-1.0
3,079,445	+				+0.4
3,079,446	-				+0.2
3,079,446	-				+0.1
3,079,446	-				+0.5
3,079,446	-				+0.6
3,079,449	+				-1.5
3,079,449	+				-0.1
3,079,450	-				-0.0
3,079,450	-				+1.0
3,079,450	-				+1.4
3,079,450	-				-1.1
3,079,450	-				+0.6
3,079,450	-				-0.1
3,079,450	-				-2.2
3,079,508	-		IAI47_14600	0.20	+1.1
3,079,517	+		IAI47_14600	0.22	-2.1
3,079,518	-		IAI47_14600	0.22	-0.1
3,079,529	+		IAI47_14600	0.24	+1.3
3,079,529	+		IAI47_14600	0.24	+1.2
3,079,529	+		IAI47_14600	0.24	-0.6
3,079,529	+		IAI47_14600	0.24	-1.4
3,079,529	+		IAI47_14600	0.24	-2.4
3,079,529	+		IAI47_14600	0.24	-0.6
3,079,530	-		IAI47_14600	0.24	-0.2
3,079,530	-		IAI47_14600	0.24	-2.1
3,079,530	-		IAI47_14600	0.24	+0.4
3,079,539	+		IAI47_14600	0.26	+0.4
3,079,565	+		IAI47_14600	0.32	+1.7
3,079,565	+		IAI47_14600	0.32	-0.6
3,079,565	+		IAI47_14600	0.32	-1.2
3,079,566	-		IAI47_14600	0.32	-1.9
3,079,566	-		IAI47_14600	0.32	-0.1
3,079,571	+		IAI47_14600	0.33	-0.4
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