Strain Fitness in Pantoea sp. MT58 around IAI47_11815

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,505,691	+		IAI47_11805	0.81	-0.6
2,505,965	-				+1.2
2,505,965	-				-0.9
2,506,142	+		IAI47_11810	0.27	+0.0
2,506,142	+		IAI47_11810	0.27	-1.2
2,506,142	+		IAI47_11810	0.27	-0.0
2,506,143	-		IAI47_11810	0.27	-1.9
2,506,158	+		IAI47_11810	0.30	-1.0
2,506,158	+		IAI47_11810	0.30	+0.1
2,506,240	-		IAI47_11810	0.43	-0.6
2,506,245	+		IAI47_11810	0.44	-0.6
2,506,278	+		IAI47_11810	0.50	-0.4
2,506,278	+		IAI47_11810	0.50	+0.6
2,506,279	-		IAI47_11810	0.50	+2.0
2,506,407	+		IAI47_11810	0.71	-1.3
2,506,407	+		IAI47_11810	0.71	+0.1
2,506,458	+		IAI47_11810	0.80	-1.1
2,506,458	+		IAI47_11810	0.80	-0.4
2,506,458	+		IAI47_11810	0.80	-0.7
2,506,459	-		IAI47_11810	0.80	+1.4
2,506,459	-		IAI47_11810	0.80	-0.9
2,506,460	+		IAI47_11810	0.80	-0.7
2,506,460	+		IAI47_11810	0.80	-2.0
2,506,460	+		IAI47_11810	0.80	+0.6
2,506,461	-		IAI47_11810	0.80	+2.6
2,506,461	-		IAI47_11810	0.80	+1.4
2,506,461	-		IAI47_11810	0.80	+0.5
2,506,461	-		IAI47_11810	0.80	+1.6
2,506,461	-		IAI47_11810	0.80	+0.4
2,506,461	-		IAI47_11810	0.80	-0.8
2,506,500	+		IAI47_11810	0.87	+0.1
2,506,558	+				-1.8
2,506,559	-				+1.6
2,506,567	+				-0.7
2,506,568	-				+0.9
2,506,568	-				+0.8
2,506,568	-				-0.0
2,506,569	+				+1.6
2,506,569	+				+0.1
2,506,569	+				+0.5
2,506,569	+				+0.8
2,506,569	+				+1.0
2,506,569	+				+0.7
2,506,570	-				-0.1
2,506,570	-				-1.4
2,506,582	+				+0.7
2,506,582	+				+1.7
2,506,583	-				+0.3
2,506,583	-				+0.2
2,506,687	+		IAI47_11815	0.11	-2.0
2,506,687	+		IAI47_11815	0.11	-1.3
2,506,688	-		IAI47_11815	0.11	-0.8
2,506,690	+		IAI47_11815	0.12	+0.2
2,506,690	+		IAI47_11815	0.12	-1.4
2,506,691	-		IAI47_11815	0.12	-0.6
2,506,691	-		IAI47_11815	0.12	-1.3
2,506,691	-		IAI47_11815	0.12	+0.5
2,506,754	+		IAI47_11815	0.18	-0.9
2,506,754	+		IAI47_11815	0.18	-1.4
2,506,786	+		IAI47_11815	0.22	-0.7
2,506,988	+		IAI47_11815	0.43	+1.4
2,506,988	+		IAI47_11815	0.43	-0.5
2,506,988	+		IAI47_11815	0.43	+0.1
2,506,989	-		IAI47_11815	0.43	-0.5
2,506,989	-		IAI47_11815	0.43	-2.3
2,506,989	-		IAI47_11815	0.43	-0.5
2,506,990	+		IAI47_11815	0.43	-1.3
2,506,990	+		IAI47_11815	0.43	-0.5
2,506,990	+		IAI47_11815	0.43	-1.6
2,506,991	-		IAI47_11815	0.44	+0.1
2,506,991	-		IAI47_11815	0.44	-0.5
2,506,991	-		IAI47_11815	0.44	-0.2
2,507,001	+		IAI47_11815	0.45	-1.5
2,507,001	+		IAI47_11815	0.45	+1.7
2,507,002	-		IAI47_11815	0.45	-0.7
2,507,002	-		IAI47_11815	0.45	-0.2
2,507,002	-		IAI47_11815	0.45	-0.3
2,507,039	+		IAI47_11815	0.49	+1.2
2,507,039	+		IAI47_11815	0.49	+0.1
2,507,040	-		IAI47_11815	0.49	+0.1
2,507,068	+		IAI47_11815	0.52	+0.1
2,507,068	-		IAI47_11815	0.52	-0.5
2,507,069	-		IAI47_11815	0.52	+0.1
2,507,069	-		IAI47_11815	0.52	+1.0
2,507,069	-		IAI47_11815	0.52	-0.6
2,507,069	-		IAI47_11815	0.52	-0.7
2,507,069	-		IAI47_11815	0.52	+1.0
2,507,128	+		IAI47_11815	0.58	-0.4
2,507,128	+		IAI47_11815	0.58	+0.6
2,507,129	-		IAI47_11815	0.58	-0.9
2,507,129	-		IAI47_11815	0.58	+3.3
2,507,132	+		IAI47_11815	0.58	-1.1
2,507,132	+		IAI47_11815	0.58	+0.8
2,507,132	+		IAI47_11815	0.58	-1.6
2,507,132	+		IAI47_11815	0.58	-1.5
2,507,132	+		IAI47_11815	0.58	-2.0
2,507,133	-		IAI47_11815	0.59	+0.3
2,507,133	-		IAI47_11815	0.59	+1.5
2,507,133	-		IAI47_11815	0.59	+2.2
2,507,133	-		IAI47_11815	0.59	-0.1
2,507,133	-		IAI47_11815	0.59	+1.0
2,507,171	+		IAI47_11815	0.63	-1.6
2,507,315	+		IAI47_11815	0.78	+0.1
2,507,318	+		IAI47_11815	0.78	-1.4
2,507,318	+		IAI47_11815	0.78	-0.5
2,507,318	+		IAI47_11815	0.78	+0.4
2,507,318	+		IAI47_11815	0.78	+2.3
2,507,318	+		IAI47_11815	0.78	+0.5
2,507,318	+		IAI47_11815	0.78	+1.6
2,507,319	-		IAI47_11815	0.78	+0.3
2,507,319	-		IAI47_11815	0.78	-1.1
2,507,319	-		IAI47_11815	0.78	+1.7
2,507,319	-		IAI47_11815	0.78	+0.1
2,507,319	-		IAI47_11815	0.78	-0.6
2,507,319	-		IAI47_11815	0.78	+0.7
2,507,353	+		IAI47_11815	0.82	-0.4
2,507,353	+		IAI47_11815	0.82	-1.1
2,507,354	-		IAI47_11815	0.82	-0.8
2,507,399	+		IAI47_11815	0.87	-0.8
2,507,400	-		IAI47_11815	0.87	-0.9
2,507,429	+				+1.1
2,507,429	+				-1.0
2,507,429	+				+0.6
2,507,430	-				+0.6
2,507,504	+				-2.4
2,507,523	+				+1.2
2,507,523	+				+1.2
2,507,524	-				-0.8
2,507,524	-				+0.1
2,507,527	-				+0.4
2,507,527	-				+0.4
2,507,527	-				+1.8
2,507,527	-				-0.3
2,507,541	+				+0.4
2,507,576	+				+0.3
2,507,577	-				-1.3
2,507,639	+				+0.4
2,507,676	+				-0.8
2,507,676	+				-0.3
2,507,676	+				-0.1
2,507,753	+				-1.3
2,507,753	+				+0.4
2,507,753	+				+0.1
2,507,753	+				+3.2
2,507,753	+				-1.0
2,507,753	+				+1.7
2,507,753	+				-0.5
2,507,754	-				+0.1
2,507,754	-				+0.5
2,507,754	-				-0.1
2,507,754	-				+1.5
2,507,754	-				-1.5
2,507,754	-				-1.2
2,507,754	-				-3.0
2,507,754	-				+1.4
2,507,754	-				+0.2
2,507,754	-				-0.0
2,507,756	+				-1.3
2,507,756	+				+1.5
2,507,756	+				-1.9
2,507,756	+				+2.4
2,507,756	+				-0.8
2,507,756	+				+0.7
2,507,757	-				-0.3
2,507,757	-				-0.2
2,507,757	-				-0.8
2,507,826	+		IAI47_11820	0.13	-0.1
2,507,827	-		IAI47_11820	0.13	-0.0
2,507,827	-		IAI47_11820	0.13	+0.6
2,507,827	-		IAI47_11820	0.13	-0.8
2,507,830	+		IAI47_11820	0.13	-2.2
2,507,831	-		IAI47_11820	0.13	+1.6
2,507,831	-		IAI47_11820	0.13	-1.5
2,507,831	-		IAI47_11820	0.13	-0.4
2,507,831	-		IAI47_11820	0.13	-1.7
2,507,831	-		IAI47_11820	0.13	-1.8
2,507,921	+		IAI47_11820	0.23	-1.6
2,507,921	+		IAI47_11820	0.23	-1.5
2,507,921	+		IAI47_11820	0.23	-1.4
2,507,922	-		IAI47_11820	0.23	+0.1
2,507,922	-		IAI47_11820	0.23	-0.1
2,507,922	-		IAI47_11820	0.23	-2.4
2,507,922	-		IAI47_11820	0.23	-0.4
2,507,922	-		IAI47_11820	0.23	-0.8
2,507,922	-		IAI47_11820	0.23	+1.3
2,507,922	-		IAI47_11820	0.23	+0.2
2,507,922	-		IAI47_11820	0.23	-1.0
2,507,922	-		IAI47_11820	0.23	+1.8
2,507,923	+		IAI47_11820	0.23	-0.3
2,508,011	+		IAI47_11820	0.32	+0.0
2,508,011	+		IAI47_11820	0.32	+0.2
2,508,032	-		IAI47_11820	0.34	-1.3
2,508,084	+		IAI47_11820	0.40	-0.1
2,508,084	+		IAI47_11820	0.40	-0.5
2,508,084	+		IAI47_11820	0.40	-0.8
2,508,084	+		IAI47_11820	0.40	+1.0
2,508,084	+		IAI47_11820	0.40	+1.3
2,508,085	-		IAI47_11820	0.40	+2.4
2,508,085	-		IAI47_11820	0.40	+0.7
2,508,104	-		IAI47_11820	0.42	+0.2
2,508,115	+		IAI47_11820	0.43	+1.4
2,508,162	+		IAI47_11820	0.48	-0.7
2,508,162	+		IAI47_11820	0.48	-0.9
2,508,162	+		IAI47_11820	0.48	+1.1
2,508,162	+		IAI47_11820	0.48	-0.4
2,508,162	+		IAI47_11820	0.48	+0.4
2,508,268	-		IAI47_11820	0.59	-0.9
2,508,268	-		IAI47_11820	0.59	-1.2
2,508,302	-		IAI47_11820	0.62	-1.5
2,508,316	-		IAI47_11820	0.64	+2.2
2,508,335	-		IAI47_11820	0.66	-2.0
2,508,380	+		IAI47_11820	0.71	-0.0
2,508,380	+		IAI47_11820	0.71	-0.2
2,508,383	+		IAI47_11820	0.71	+0.4
2,508,384	-		IAI47_11820	0.71	+1.1
2,508,384	-		IAI47_11820	0.71	-0.3
2,508,384	-		IAI47_11820	0.71	-1.1
2,508,384	-		IAI47_11820	0.71	-2.4
2,508,384	-		IAI47_11820	0.71	-0.2
2,508,384	-		IAI47_11820	0.71	+3.2
2,508,384	-		IAI47_11820	0.71	+1.3
2,508,426	+		IAI47_11820	0.75	-0.3
2,508,433	+		IAI47_11820	0.76	+6.1
2,508,446	+		IAI47_11820	0.77	-1.8
2,508,447	-		IAI47_11820	0.78	+2.0
2,508,447	-		IAI47_11820	0.78	-0.4
2,508,520	+		IAI47_11820	0.85	-0.4