Strain Fitness in Pantoea sp. MT58 around IAI47_09985

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,111,018	+		IAI47_09975	0.70	+1.9
2,111,019	-		IAI47_09975	0.71	+0.4
2,111,019	-		IAI47_09975	0.71	-0.6
2,111,108	+		IAI47_09975	0.88	+0.0
2,111,238	-				+0.4
2,111,240	+				+0.3
2,111,240	+				-0.2
2,111,241	-				-2.0
2,111,293	+				-1.3
2,111,294	-				+1.5
2,111,294	-				+3.3
2,111,299	+				-0.2
2,111,300	-				-0.7
2,111,300	-				+1.3
2,111,357	+		IAI47_09980	0.15	-1.0
2,111,357	+		IAI47_09980	0.15	-0.5
2,111,358	-		IAI47_09980	0.15	+0.9
2,111,358	-		IAI47_09980	0.15	-0.2
2,111,390	+		IAI47_09980	0.23	+0.4
2,111,390	+		IAI47_09980	0.23	+0.3
2,111,390	+		IAI47_09980	0.23	+0.9
2,111,390	+		IAI47_09980	0.23	-1.4
2,111,391	-		IAI47_09980	0.23	+0.9
2,111,391	-		IAI47_09980	0.23	-0.3
2,111,432	+		IAI47_09980	0.34	-0.5
2,111,467	+		IAI47_09980	0.42	+1.7
2,111,467	+		IAI47_09980	0.42	-2.0
2,111,467	+		IAI47_09980	0.42	+0.4
2,111,467	+		IAI47_09980	0.42	-0.2
2,111,468	-		IAI47_09980	0.43	-0.1
2,111,468	-		IAI47_09980	0.43	-1.5
2,111,468	-		IAI47_09980	0.43	+1.7
2,111,468	-		IAI47_09980	0.43	+1.0
2,111,594	+		IAI47_09980	0.74	+1.9
2,111,632	+		IAI47_09980	0.84	-0.9
2,111,632	+		IAI47_09980	0.84	-1.5
2,111,632	+		IAI47_09980	0.84	+0.1
2,111,632	+		IAI47_09980	0.84	+0.3
2,111,633	-		IAI47_09980	0.84	-0.7
2,111,633	-		IAI47_09980	0.84	+0.9
2,111,633	-		IAI47_09980	0.84	+1.0
2,111,633	-		IAI47_09980	0.84	-0.5
2,111,633	-		IAI47_09980	0.84	+0.1
2,111,635	-		IAI47_09980	0.84	-0.3
2,111,675	+				+0.3
2,111,675	+				+0.6
2,111,676	-				+3.3
2,111,676	-				+1.9
2,111,690	+				-0.8
2,111,690	+				+1.0
2,111,723	+				-0.2
2,111,724	-				+0.3
2,111,724	-				-1.3
2,111,724	-				-0.9
2,111,724	-				-1.5
2,111,724	-				+2.0
2,111,724	-				-1.4
2,111,724	-				-1.4
2,111,727	+				-0.0
2,111,728	-				+1.0
2,111,728	-				+2.3
2,111,728	-				+1.4
2,111,728	-				-0.7
2,111,728	-				-1.0
2,111,820	+				+0.5
2,111,820	+				+0.4
2,111,821	-				+0.9
2,111,821	-				-0.1
2,111,821	-				+2.9
2,111,913	-				+1.2
2,111,927	+				-1.0
2,111,952	+				+1.5
2,111,952	+				-0.4
2,111,952	+				-0.3
2,111,952	+				+1.0
2,111,953	-				-0.1
2,111,953	-				-1.2
2,111,953	-				-1.1
2,111,999	+				-0.5
2,112,001	+				+1.4
2,112,001	+				+2.5
2,112,001	+				+0.9
2,112,002	-				+0.2
2,112,002	-				+2.0
2,112,015	+				+1.7
2,112,015	+				-1.9
2,112,015	+				-1.9
2,112,015	+				+1.9
2,112,015	+				-0.9
2,112,015	+				-2.1
2,112,015	+				-1.0
2,112,016	-				+0.1
2,112,016	-				-0.7
2,112,051	-				-1.4
2,112,154	+		IAI47_09985	0.13	-1.1
2,112,154	+		IAI47_09985	0.13	+0.2
2,112,154	+		IAI47_09985	0.13	-0.0
2,112,154	+		IAI47_09985	0.13	+0.2
2,112,154	+		IAI47_09985	0.13	-0.0
2,112,154	+		IAI47_09985	0.13	-0.0
2,112,154	+		IAI47_09985	0.13	+0.2
2,112,155	-		IAI47_09985	0.13	+0.7
2,112,155	-		IAI47_09985	0.13	-0.9
2,112,155	-		IAI47_09985	0.13	+0.4
2,112,155	-		IAI47_09985	0.13	-0.0
2,112,172	+		IAI47_09985	0.15	-0.9
2,112,172	+		IAI47_09985	0.15	+0.1
2,112,172	+		IAI47_09985	0.15	-0.7
2,112,173	-		IAI47_09985	0.15	-0.3
2,112,198	+		IAI47_09985	0.18	-0.5
2,112,199	-		IAI47_09985	0.18	-1.3
2,112,205	+		IAI47_09985	0.18	-1.4
2,112,206	-		IAI47_09985	0.18	+0.8
2,112,285	+		IAI47_09985	0.26	-1.5
2,112,285	+		IAI47_09985	0.26	-2.1
2,112,285	+		IAI47_09985	0.26	-0.5
2,112,286	-		IAI47_09985	0.26	-1.3
2,112,328	+		IAI47_09985	0.30	-0.5
2,112,329	-		IAI47_09985	0.30	+1.6
2,112,329	-		IAI47_09985	0.30	+1.3
2,112,372	+		IAI47_09985	0.34	+0.4
2,112,372	+		IAI47_09985	0.34	+0.6
2,112,372	+		IAI47_09985	0.34	-1.5
2,112,372	+		IAI47_09985	0.34	-0.5
2,112,380	-		IAI47_09985	0.35	-0.3
2,112,380	-		IAI47_09985	0.35	+1.7
2,112,409	-		IAI47_09985	0.38	-1.6
2,112,409	-		IAI47_09985	0.38	+2.1
2,112,427	+		IAI47_09985	0.40	-0.4
2,112,427	+		IAI47_09985	0.40	-0.2
2,112,427	+		IAI47_09985	0.40	-0.4
2,112,427	+		IAI47_09985	0.40	-1.6
2,112,427	+		IAI47_09985	0.40	+0.2
2,112,428	-		IAI47_09985	0.40	+0.4
2,112,428	-		IAI47_09985	0.40	-2.2
2,112,428	-		IAI47_09985	0.40	-0.9
2,112,428	-		IAI47_09985	0.40	-0.5
2,112,428	-		IAI47_09985	0.40	-0.9
2,112,428	-		IAI47_09985	0.40	+1.5
2,112,430	-		IAI47_09985	0.40	+0.3
2,112,546	-		IAI47_09985	0.51	-0.1
2,112,675	+		IAI47_09985	0.64	-2.1
2,112,679	+		IAI47_09985	0.64	+1.3
2,112,679	+		IAI47_09985	0.64	+0.2
2,112,680	-		IAI47_09985	0.64	-0.9
2,112,680	-		IAI47_09985	0.64	+0.7
2,112,716	+		IAI47_09985	0.68	+1.1
2,112,828	+		IAI47_09985	0.79	+1.0
2,112,828	+		IAI47_09985	0.79	+0.6
2,112,829	-		IAI47_09985	0.79	-2.1
2,112,835	-		IAI47_09985	0.79	-0.0
2,112,849	+		IAI47_09985	0.81	-0.1
2,112,861	+		IAI47_09985	0.82	+0.7
2,112,862	-		IAI47_09985	0.82	-2.2
2,112,878	-		IAI47_09985	0.84	+0.5
2,112,889	+		IAI47_09985	0.85	+1.0
2,112,954	+				+0.1
2,112,955	-				-0.7
2,112,955	-				-1.3
2,112,955	-				-2.0
2,112,955	-				-0.2
2,112,955	-				-1.9
2,112,968	+				-1.0
2,112,990	+				+1.3
2,112,991	-				-1.7
2,113,021	-				+0.9
2,113,045	+				-2.0
2,113,046	-				-1.1
2,113,054	+				+0.7
2,113,087	-				-0.7
2,113,087	-				+1.4
2,113,087	-				-0.3
2,113,087	-				+0.3
2,113,216	+		IAI47_09990	0.15	+1.5
2,113,217	-		IAI47_09990	0.15	-1.7
2,113,272	+		IAI47_09990	0.21	+1.3
2,113,272	+		IAI47_09990	0.21	-1.9
2,113,272	+		IAI47_09990	0.21	+0.9
2,113,272	+		IAI47_09990	0.21	-2.1
2,113,273	-		IAI47_09990	0.21	+2.3
2,113,273	-		IAI47_09990	0.21	-0.0
2,113,370	-		IAI47_09990	0.33	-0.1
2,113,370	-		IAI47_09990	0.33	+0.1
2,113,370	-		IAI47_09990	0.33	-0.1
2,113,381	+		IAI47_09990	0.34	-1.3
2,113,382	-		IAI47_09990	0.34	-1.8
2,113,421	-		IAI47_09990	0.39	+0.2
2,113,421	-		IAI47_09990	0.39	-0.5
2,113,477	+		IAI47_09990	0.45	+1.3
2,113,615	+		IAI47_09990	0.61	-1.6
2,113,616	-		IAI47_09990	0.61	+1.3
2,113,705	+		IAI47_09990	0.72	-0.3
2,113,705	+		IAI47_09990	0.72	+0.7
2,113,706	-		IAI47_09990	0.72	+0.1
2,113,706	-		IAI47_09990	0.72	+0.3
2,113,706	-		IAI47_09990	0.72	+1.6
2,113,706	-		IAI47_09990	0.72	+0.6
2,113,843	+		IAI47_09990	0.88	-1.7
2,113,843	+		IAI47_09990	0.88	-0.7
2,113,844	-		IAI47_09990	0.88	+0.1
2,113,845	+		IAI47_09990	0.88	+1.2
2,113,845	+		IAI47_09990	0.88	+0.7
2,113,846	-		IAI47_09990	0.88	+1.1
2,113,907	-				+1.8
2,113,907	-				+0.5
2,113,907	-				+0.7
2,113,914	+				-0.4
2,113,914	+				+2.2
2,113,914	+				-2.1
2,113,914	+				-0.7
2,113,948	+				-0.3
2,113,948	+				+0.2
2,113,948	+				+2.1
2,113,949	-				-1.9
2,113,949	-				+1.3
2,113,949	-				+0.8
2,113,952	+				-1.4
2,113,953	-				+1.2
2,113,953	-				+1.5
2,113,953	-				+0.3