Strain Fitness in Pantoea sp. MT58 around IAI47_07370

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,556,249	+		IAI47_07365	0.34	+1.6
1,556,293	+		IAI47_07365	0.38	+0.8
1,556,305	-		IAI47_07365	0.39	+0.1
1,556,313	+		IAI47_07365	0.39	+0.3
1,556,314	-		IAI47_07365	0.39	+0.2
1,556,314	-		IAI47_07365	0.39	+0.5
1,556,337	+		IAI47_07365	0.41	-0.4
1,556,337	+		IAI47_07365	0.41	+1.9
1,556,337	+		IAI47_07365	0.41	+0.2
1,556,337	+		IAI47_07365	0.41	+1.0
1,556,337	+		IAI47_07365	0.41	+2.9
1,556,337	+		IAI47_07365	0.41	+0.4
1,556,337	+		IAI47_07365	0.41	-1.9
1,556,337	+		IAI47_07365	0.41	+2.1
1,556,337	+		IAI47_07365	0.41	+0.1
1,556,337	+		IAI47_07365	0.41	+1.5
1,556,337	+		IAI47_07365	0.41	-1.3
1,556,338	-		IAI47_07365	0.41	-1.8
1,556,338	-		IAI47_07365	0.41	-0.3
1,556,338	-		IAI47_07365	0.41	+0.0
1,556,338	-		IAI47_07365	0.41	-2.4
1,556,366	+		IAI47_07365	0.43	+1.0
1,556,367	-		IAI47_07365	0.44	+0.1
1,556,367	-		IAI47_07365	0.44	-0.6
1,556,368	+		IAI47_07365	0.44	-0.9
1,556,368	+		IAI47_07365	0.44	-3.1
1,556,369	-		IAI47_07365	0.44	+1.1
1,556,369	-		IAI47_07365	0.44	-0.9
1,556,369	-		IAI47_07365	0.44	-1.6
1,556,379	+		IAI47_07365	0.44	-2.3
1,556,381	+		IAI47_07365	0.45	-1.1
1,556,381	+		IAI47_07365	0.45	+0.1
1,556,381	+		IAI47_07365	0.45	-1.7
1,556,381	+		IAI47_07365	0.45	-2.5
1,556,381	+		IAI47_07365	0.45	+0.2
1,556,381	+		IAI47_07365	0.45	-1.3
1,556,381	+		IAI47_07365	0.45	-0.3
1,556,381	+		IAI47_07365	0.45	+0.6
1,556,382	-		IAI47_07365	0.45	+2.4
1,556,382	-		IAI47_07365	0.45	+0.4
1,556,382	-		IAI47_07365	0.45	-0.7
1,556,382	-		IAI47_07365	0.45	+0.2
1,556,382	-		IAI47_07365	0.45	+1.1
1,556,382	-		IAI47_07365	0.45	+0.1
1,556,390	+		IAI47_07365	0.45	-0.6
1,556,391	-		IAI47_07365	0.45	+0.4
1,556,391	-		IAI47_07365	0.45	-1.2
1,556,391	-		IAI47_07365	0.45	-0.7
1,556,391	-		IAI47_07365	0.45	+0.0
1,556,399	+		IAI47_07365	0.46	-0.0
1,556,399	+		IAI47_07365	0.46	+0.8
1,556,427	+		IAI47_07365	0.48	+1.3
1,556,493	+		IAI47_07365	0.53	+2.2
1,556,493	+		IAI47_07365	0.53	-0.1
1,556,493	+		IAI47_07365	0.53	+0.3
1,556,494	-		IAI47_07365	0.53	+3.4
1,556,494	-		IAI47_07365	0.53	-1.4
1,556,494	-		IAI47_07365	0.53	+0.1
1,556,494	-		IAI47_07365	0.53	-1.1
1,556,495	+		IAI47_07365	0.54	+1.1
1,556,495	+		IAI47_07365	0.54	+0.1
1,556,495	+		IAI47_07365	0.54	+2.2
1,556,495	+		IAI47_07365	0.54	+1.0
1,556,495	+		IAI47_07365	0.54	-0.1
1,556,496	-		IAI47_07365	0.54	+0.4
1,556,496	-		IAI47_07365	0.54	+1.1
1,556,496	-		IAI47_07365	0.54	+0.8
1,556,496	-		IAI47_07365	0.54	+0.6
1,556,496	-		IAI47_07365	0.54	+1.2
1,556,496	-		IAI47_07365	0.54	+2.4
1,556,496	-		IAI47_07365	0.54	-0.1
1,556,496	-		IAI47_07365	0.54	+0.8
1,556,537	+		IAI47_07365	0.57	+0.3
1,556,538	-		IAI47_07365	0.57	+1.8
1,556,582	+		IAI47_07365	0.60	-0.4
1,556,583	-		IAI47_07365	0.60	+1.4
1,556,583	-		IAI47_07365	0.60	-0.7
1,556,583	-		IAI47_07365	0.60	+2.9
1,556,616	+		IAI47_07365	0.63	+0.1
1,556,617	-		IAI47_07365	0.63	-0.9
1,556,617	-		IAI47_07365	0.63	-1.0
1,556,617	-		IAI47_07365	0.63	+0.3
1,556,619	+		IAI47_07365	0.63	-0.7
1,556,619	+		IAI47_07365	0.63	+0.6
1,556,620	-		IAI47_07365	0.63	-0.6
1,556,630	+		IAI47_07365	0.64	+0.7
1,556,631	-		IAI47_07365	0.64	+0.4
1,556,649	+		IAI47_07365	0.66	-0.6
1,556,649	+		IAI47_07365	0.66	-0.1
1,556,650	-		IAI47_07365	0.66	-0.2
1,556,650	-		IAI47_07365	0.66	+0.9
1,556,705	+		IAI47_07365	0.70	-1.9
1,556,705	+		IAI47_07365	0.70	-0.8
1,556,705	+		IAI47_07365	0.70	-0.2
1,556,705	+		IAI47_07365	0.70	-0.7
1,556,705	+		IAI47_07365	0.70	+0.3
1,556,706	-		IAI47_07365	0.70	-0.6
1,556,706	-		IAI47_07365	0.70	-0.4
1,556,706	-		IAI47_07365	0.70	-2.2
1,556,706	-		IAI47_07365	0.70	-0.0
1,556,706	-		IAI47_07365	0.70	+0.9
1,556,770	+		IAI47_07365	0.75	-1.6
1,556,770	+		IAI47_07365	0.75	-0.5
1,556,770	+		IAI47_07365	0.75	-0.4
1,556,771	-		IAI47_07365	0.75	-2.1
1,556,771	-		IAI47_07365	0.75	-0.4
1,556,772	+		IAI47_07365	0.75	+0.8
1,556,772	+		IAI47_07365	0.75	-0.5
1,556,772	+		IAI47_07365	0.75	+3.3
1,556,772	+		IAI47_07365	0.75	-1.5
1,556,773	-		IAI47_07365	0.75	+0.7
1,556,773	-		IAI47_07365	0.75	-2.4
1,556,788	-		IAI47_07365	0.76	-0.1
1,556,788	-		IAI47_07365	0.76	+0.0
1,556,814	+		IAI47_07365	0.78	+0.8
1,556,814	+		IAI47_07365	0.78	-0.9
1,556,814	+		IAI47_07365	0.78	+0.9
1,556,814	+		IAI47_07365	0.78	-1.1
1,556,814	+		IAI47_07365	0.78	-1.1
1,556,815	-		IAI47_07365	0.79	+1.1
1,556,817	+		IAI47_07365	0.79	-1.2
1,556,817	+		IAI47_07365	0.79	-0.0
1,556,818	-		IAI47_07365	0.79	-1.6
1,556,818	-		IAI47_07365	0.79	+0.2
1,556,818	-		IAI47_07365	0.79	-0.4
1,556,833	-		IAI47_07365	0.80	+0.9
1,556,837	+		IAI47_07365	0.80	+1.0
1,556,838	-		IAI47_07365	0.80	-0.9
1,556,838	-		IAI47_07365	0.80	+1.4
1,556,838	-		IAI47_07365	0.80	-2.5
1,556,850	+		IAI47_07365	0.81	+0.9
1,556,850	+		IAI47_07365	0.81	-1.1
1,556,851	-		IAI47_07365	0.81	+0.3
1,556,872	-		IAI47_07365	0.83	-1.9
1,556,886	+		IAI47_07365	0.84	+0.1
1,556,886	+		IAI47_07365	0.84	-0.4
1,556,886	+		IAI47_07365	0.84	+1.6
1,556,887	-		IAI47_07365	0.84	-2.0
1,556,887	-		IAI47_07365	0.84	+1.7
1,556,904	+		IAI47_07365	0.86	-1.6
1,556,904	+		IAI47_07365	0.86	-1.2
1,556,904	+		IAI47_07365	0.86	+1.3
1,556,904	+		IAI47_07365	0.86	+1.6
1,556,905	-		IAI47_07365	0.86	+1.8
1,556,905	-		IAI47_07365	0.86	+0.4
1,556,905	-		IAI47_07365	0.86	+0.4
1,556,907	+		IAI47_07365	0.86	+1.1
1,556,907	+		IAI47_07365	0.86	+0.8
1,556,907	+		IAI47_07365	0.86	-0.1
1,556,907	+		IAI47_07365	0.86	-0.5
1,556,907	+		IAI47_07365	0.86	+0.7
1,556,908	-		IAI47_07365	0.86	-1.4
1,556,908	-		IAI47_07365	0.86	-0.7
1,556,908	-		IAI47_07365	0.86	-1.5
1,556,908	-		IAI47_07365	0.86	-2.8
1,557,023	+				+0.7
1,557,023	+				-0.9
1,557,024	-				-1.2
1,557,047	-				+0.7
1,557,074	+				-0.4
1,557,074	+				+0.9
1,557,079	+				+0.5
1,557,079	+				-1.2
1,557,111	-				+0.0
1,557,114	-				-1.8
1,557,114	-				-1.6
1,557,215	-				+0.3
1,557,215	-				-0.1
1,557,224	+				-0.4
1,557,224	+				+2.4
1,557,229	-				+0.8
1,557,231	+				+1.3
1,557,234	+				+1.4
1,557,234	+				+0.5
1,557,235	-				+1.6
1,557,248	+				+1.8
1,557,249	-				+1.1
1,557,249	-				-0.3
1,557,249	-				+0.7
1,557,255	+				+1.4
1,557,256	-				-1.7
1,557,303	+				+0.5
1,557,304	-				-0.7
1,557,304	-				-1.0
1,557,304	-				-1.0
1,557,304	-				+1.5
1,557,304	-				-0.6
1,557,365	+		IAI47_07370	0.10	+0.9
1,557,365	+		IAI47_07370	0.10	-0.8
1,557,383	-		IAI47_07370	0.12	-0.7
1,557,383	-		IAI47_07370	0.12	+0.1
1,557,432	+		IAI47_07370	0.15	+0.2
1,557,433	-		IAI47_07370	0.15	+0.5
1,557,530	+		IAI47_07370	0.22	-0.2
1,557,558	-		IAI47_07370	0.24	-0.7
1,557,558	-		IAI47_07370	0.24	-1.0
1,557,564	-		IAI47_07370	0.25	-1.1
1,557,578	-		IAI47_07370	0.26	-1.1
1,557,591	-		IAI47_07370	0.26	-0.4
1,557,604	-		IAI47_07370	0.27	-1.2
1,557,604	-		IAI47_07370	0.27	+0.5
1,557,607	+		IAI47_07370	0.28	-0.8
1,557,607	+		IAI47_07370	0.28	+4.4
1,557,607	+		IAI47_07370	0.28	+1.9
1,557,607	+		IAI47_07370	0.28	-1.3
1,557,629	+		IAI47_07370	0.29	+3.6
1,557,630	-		IAI47_07370	0.29	+0.2
1,557,786	+		IAI47_07370	0.40	-0.2
1,557,786	+		IAI47_07370	0.40	-1.4
1,557,832	+		IAI47_07370	0.44	-0.8
1,557,832	+		IAI47_07370	0.44	-3.2
1,557,833	-		IAI47_07370	0.44	+0.3
1,557,833	-		IAI47_07370	0.44	+0.9
1,557,874	-		IAI47_07370	0.47	+0.1
1,557,998	+		IAI47_07370	0.55	+1.3
1,557,999	-		IAI47_07370	0.56	+0.4
1,558,012	+		IAI47_07370	0.56	-0.7
1,558,013	-		IAI47_07370	0.57	-1.6
1,558,126	+		IAI47_07370	0.65	-1.8
1,558,127	-		IAI47_07370	0.65	-1.6
1,558,127	-		IAI47_07370	0.65	-0.2
1,558,130	+		IAI47_07370	0.65	+0.5
1,558,130	+		IAI47_07370	0.65	-0.5
1,558,131	-		IAI47_07370	0.65	+0.2
1,558,131	-		IAI47_07370	0.65	-0.3
1,558,131	-		IAI47_07370	0.65	+1.0
1,558,190	-		IAI47_07370	0.69	+0.7
1,558,275	+		IAI47_07370	0.75	+3.4
1,558,299	+		IAI47_07370	0.77	+0.7
1,558,299	+		IAI47_07370	0.77	+0.3
1,558,299	+		IAI47_07370	0.77	+1.4
1,558,299	+		IAI47_07370	0.77	+1.5
1,558,300	-		IAI47_07370	0.77	+1.1
1,558,300	-		IAI47_07370	0.77	+0.3
1,558,320	-		IAI47_07370	0.78	+0.9
1,558,322	-		IAI47_07370	0.79	-1.1
1,558,360	+		IAI47_07370	0.81	+0.4
1,558,360	+		IAI47_07370	0.81	-0.3
1,558,360	+		IAI47_07370	0.81	-1.5
1,558,361	-		IAI47_07370	0.81	-0.6
1,558,361	-		IAI47_07370	0.81	+0.3
1,558,361	-		IAI47_07370	0.81	+0.8
1,558,494	-				-0.2
1,558,584	+				+4.6
1,558,585	-				+0.3
1,558,585	-				+0.4
1,558,622	+				+1.3
1,558,623	-				+0.4
1,558,623	-				-2.5
1,558,636	-				-0.1
1,558,652	-				-0.9
1,558,748	+		IAI47_07375	0.12	-1.0
1,558,748	+		IAI47_07375	0.12	+1.0
1,558,749	-		IAI47_07375	0.12	-1.2
1,558,790	-		IAI47_07375	0.17	-0.4
1,558,824	-		IAI47_07375	0.21	-1.2
1,558,824	-		IAI47_07375	0.21	+0.3
1,558,827	-		IAI47_07375	0.22	-1.4
1,558,912	+		IAI47_07375	0.32	-1.7
1,558,913	-		IAI47_07375	0.32	-0.6
1,558,913	-		IAI47_07375	0.32	+2.4
1,558,981	+		IAI47_07375	0.41	+1.9
1,559,002	-		IAI47_07375	0.43	+0.8
1,559,025	-		IAI47_07375	0.46	+1.4
1,559,152	+		IAI47_07375	0.62	+0.1
1,559,153	-		IAI47_07375	0.62	-0.3
1,559,153	-		IAI47_07375	0.62	-0.6
1,559,153	-		IAI47_07375	0.62	-0.6
1,559,153	-		IAI47_07375	0.62	+0.4
1,559,153	-		IAI47_07375	0.62	+1.3
1,559,175	-		IAI47_07375	0.64	-2.5
1,559,187	+		IAI47_07375	0.66	-0.6
1,559,188	-		IAI47_07375	0.66	-1.6
1,559,188	-		IAI47_07375	0.66	-1.6
1,559,188	-		IAI47_07375	0.66	-0.1
1,559,188	-		IAI47_07375	0.66	-0.0
1,559,354	-		IAI47_07375	0.86	+0.1
1,559,354	-		IAI47_07375	0.86	+0.3
1,559,354	-		IAI47_07375	0.86	-0.8
1,559,373	+		IAI47_07375	0.89	+1.0
1,559,398	-				-0.8
1,559,589	+		IAI47_07380	0.14	+0.2
1,559,589	+		IAI47_07380	0.14	-1.9