Strain Fitness in Pantoea sp. MT58 around IAI47_07185

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,516,123	-		IAI47_07175	0.67	+0.5
1,516,128	+		IAI47_07175	0.68	-2.1
1,516,128	+		IAI47_07175	0.68	-1.9
1,516,128	+		IAI47_07175	0.68	-1.6
1,516,128	+		IAI47_07175	0.68	+1.3
1,516,128	+		IAI47_07175	0.68	-0.9
1,516,128	+		IAI47_07175	0.68	+1.8
1,516,129	-		IAI47_07175	0.68	+1.2
1,516,129	-		IAI47_07175	0.68	-0.6
1,516,131	+		IAI47_07175	0.68	+0.4
1,516,132	-		IAI47_07175	0.68	-1.2
1,516,132	-		IAI47_07175	0.68	-1.9
1,516,132	-		IAI47_07175	0.68	+1.2
1,516,132	-		IAI47_07175	0.68	-0.4
1,516,132	-		IAI47_07175	0.68	+1.6
1,516,138	-		IAI47_07175	0.69	+1.1
1,516,158	+		IAI47_07175	0.70	-2.3
1,516,158	+		IAI47_07175	0.70	-1.5
1,516,159	-		IAI47_07175	0.71	-3.3
1,516,159	-		IAI47_07175	0.71	-1.5
1,516,194	+		IAI47_07175	0.74	-0.3
1,516,194	+		IAI47_07175	0.74	-1.9
1,516,194	+		IAI47_07175	0.74	-0.0
1,516,194	+		IAI47_07175	0.74	+0.1
1,516,195	-		IAI47_07175	0.74	-0.6
1,516,195	-		IAI47_07175	0.74	+0.4
1,516,195	-		IAI47_07175	0.74	-0.6
1,516,195	-		IAI47_07175	0.74	-2.2
1,516,200	+		IAI47_07175	0.74	+1.1
1,516,200	+		IAI47_07175	0.74	-0.9
1,516,201	-		IAI47_07175	0.75	+0.9
1,516,263	-		IAI47_07175	0.80	+1.5
1,516,263	-		IAI47_07175	0.80	+2.4
1,516,387	+				-0.9
1,516,387	+				+0.1
1,516,387	+				+1.4
1,516,387	+				+2.7
1,516,387	+				+1.5
1,516,388	-				-0.3
1,516,393	+				-1.2
1,516,468	+				-0.8
1,516,468	+				-1.1
1,516,469	-				+1.4
1,516,489	+				+0.2
1,516,489	+				-0.1
1,516,489	+				+0.2
1,516,489	+				+0.9
1,516,490	-				-0.9
1,516,515	+				+1.0
1,516,515	+				+0.7
1,516,520	+				-0.6
1,516,520	+				-0.3
1,516,520	+				+0.1
1,516,520	+				-0.3
1,516,521	-				-1.1
1,516,521	-				-2.1
1,516,521	-				+0.8
1,516,521	-				-0.3
1,516,538	+				+0.5
1,516,538	+				-2.3
1,516,539	-				+0.8
1,516,555	+				+1.3
1,516,555	+				-0.9
1,516,574	+				-2.0
1,516,575	-				-2.6
1,516,662	+				+0.5
1,516,663	-				-1.9
1,516,663	-				-0.8
1,516,678	+		IAI47_07180	0.14	+1.1
1,516,678	+		IAI47_07180	0.14	+0.7
1,516,678	+		IAI47_07180	0.14	-0.5
1,516,678	+		IAI47_07180	0.14	+1.3
1,516,678	+		IAI47_07180	0.14	+0.3
1,516,678	+		IAI47_07180	0.14	-0.3
1,516,678	+		IAI47_07180	0.14	-2.4
1,516,678	+		IAI47_07180	0.14	-0.8
1,516,678	+		IAI47_07180	0.14	+0.5
1,516,679	-		IAI47_07180	0.15	+1.6
1,516,781	+		IAI47_07180	0.46	+0.4
1,516,782	-		IAI47_07180	0.46	+0.2
1,516,782	-		IAI47_07180	0.46	+1.3
1,516,782	-		IAI47_07180	0.46	-0.3
1,516,783	+		IAI47_07180	0.46	+1.1
1,516,783	+		IAI47_07180	0.46	-0.7
1,516,783	+		IAI47_07180	0.46	+0.5
1,516,783	+		IAI47_07180	0.46	-0.4
1,516,784	-		IAI47_07180	0.47	+0.3
1,516,811	-		IAI47_07180	0.55	-2.1
1,516,844	+		IAI47_07180	0.65	+0.2
1,516,865	+		IAI47_07180	0.72	-0.7
1,516,865	+		IAI47_07180	0.72	-3.0
1,516,865	+		IAI47_07180	0.72	-0.5
1,516,865	+		IAI47_07180	0.72	+1.4
1,516,865	+		IAI47_07180	0.72	-1.1
1,516,865	+		IAI47_07180	0.72	-0.9
1,516,865	+		IAI47_07180	0.72	-0.4
1,516,865	+		IAI47_07180	0.72	+0.2
1,516,865	+		IAI47_07180	0.72	+0.2
1,516,865	+		IAI47_07180	0.72	-0.9
1,516,865	+		IAI47_07180	0.72	+0.5
1,516,865	+		IAI47_07180	0.72	+2.6
1,516,866	-		IAI47_07180	0.72	+0.1
1,516,866	-		IAI47_07180	0.72	-0.2
1,516,866	-		IAI47_07180	0.72	-2.1
1,516,866	-		IAI47_07180	0.72	-1.7
1,516,866	-		IAI47_07180	0.72	+1.0
1,516,866	-		IAI47_07180	0.72	-1.5
1,516,866	-		IAI47_07180	0.72	+0.4
1,516,913	-		IAI47_07180	0.86	+1.2
1,516,955	+				+0.3
1,516,955	+				+2.4
1,516,956	-				+0.4
1,516,963	+				+1.4
1,516,963	+				-0.3
1,516,964	-				-0.6
1,516,964	-				+1.1
1,516,964	-				-1.7
1,516,964	-				+1.4
1,516,965	+				-1.4
1,516,965	+				-1.9
1,516,965	+				-1.1
1,516,965	+				-0.6
1,516,965	+				+1.1
1,516,965	+				-0.9
1,516,965	+				+1.9
1,516,965	+				+1.8
1,516,965	+				-0.0
1,516,965	+				-0.6
1,516,965	+				+1.5
1,516,965	+				-0.0
1,516,965	+				-0.9
1,516,965	+				-0.4
1,516,965	-				+3.2
1,516,965	-				+1.5
1,516,966	-				-0.4
1,516,966	-				+2.0
1,516,966	-				+0.1
1,516,966	-				-1.2
1,516,966	-				+0.2
1,516,966	-				+2.3
1,516,966	-				+0.1
1,516,966	-				+1.4
1,516,966	-				+0.7
1,516,966	-				-0.6
1,516,966	-				-1.5
1,516,966	-				+1.8
1,516,966	-				-0.7
1,516,976	+				-1.6
1,516,977	-				-0.9
1,516,977	-				+0.6
1,516,977	-				-1.1
1,516,986	+				+0.4
1,516,986	+				+0.5
1,516,986	+				-0.7
1,516,987	-				-1.6
1,516,987	-				-0.1
1,517,032	-				-0.3
1,517,054	+				-2.2
1,517,054	+				+0.1
1,517,055	-				-0.1
1,517,086	+				-1.9
1,517,087	-				+0.8
1,517,107	+				-0.1
1,517,107	+				-1.1
1,517,121	+				+0.8
1,517,121	+				+0.4
1,517,122	-				+0.8
1,517,122	-				+1.6
1,517,243	-		IAI47_07185	0.18	-2.3
1,517,276	+		IAI47_07185	0.21	-0.2
1,517,277	-		IAI47_07185	0.21	-1.5
1,517,277	-		IAI47_07185	0.21	-0.1
1,517,296	-		IAI47_07185	0.23	-0.9
1,517,318	-		IAI47_07185	0.25	-0.8
1,517,342	+		IAI47_07185	0.27	-0.7
1,517,343	-		IAI47_07185	0.27	-0.2
1,517,343	-		IAI47_07185	0.27	+0.9
1,517,343	-		IAI47_07185	0.27	+1.1
1,517,489	-		IAI47_07185	0.41	+3.4
1,517,563	+		IAI47_07185	0.48	+0.8
1,517,563	+		IAI47_07185	0.48	+0.4
1,517,563	+		IAI47_07185	0.48	-1.5
1,517,564	-		IAI47_07185	0.48	+1.4
1,517,683	+		IAI47_07185	0.59	-1.4
1,517,805	+		IAI47_07185	0.71	-1.1
1,517,806	-		IAI47_07185	0.71	-0.9
1,517,961	+		IAI47_07185	0.85	-2.3
1,517,961	+		IAI47_07185	0.85	-1.5
1,517,961	+		IAI47_07185	0.85	+1.2
1,517,961	+		IAI47_07185	0.85	-0.2
1,517,961	+		IAI47_07185	0.85	-0.2
1,517,962	-		IAI47_07185	0.86	-1.8
1,517,969	+		IAI47_07185	0.86	-1.0
1,517,969	+		IAI47_07185	0.86	+0.6
1,517,969	+		IAI47_07185	0.86	-0.3
1,517,969	+		IAI47_07185	0.86	+1.5
1,517,969	+		IAI47_07185	0.86	+2.6
1,517,970	-		IAI47_07185	0.86	-0.5
1,517,970	-		IAI47_07185	0.86	-2.0
1,517,970	-		IAI47_07185	0.86	+0.1
1,517,970	-		IAI47_07185	0.86	-1.0
1,517,970	-		IAI47_07185	0.86	+0.6
1,518,037	+				-0.3
1,518,038	-				-0.3
1,518,059	+				+0.9
1,518,059	+				+0.5
1,518,060	-				+0.3
1,518,060	-				+0.7
1,518,130	-				+1.2
1,518,146	-				+0.4
1,518,146	-				-0.5
1,518,146	-				-0.3
1,518,261	+				+2.1
1,518,261	+				+1.0
1,518,262	-				+0.8
1,518,326	+				-0.5
1,518,342	-		IAI47_07190	0.11	-0.6
1,518,362	-		IAI47_07190	0.13	-0.8
1,518,387	+		IAI47_07190	0.16	-0.2
1,518,388	-		IAI47_07190	0.16	+0.8
1,518,391	+		IAI47_07190	0.16	-0.5
1,518,391	+		IAI47_07190	0.16	-0.3
1,518,391	+		IAI47_07190	0.16	-1.0
1,518,391	+		IAI47_07190	0.16	-0.2
1,518,391	+		IAI47_07190	0.16	-2.5
1,518,391	+		IAI47_07190	0.16	+1.1
1,518,391	+		IAI47_07190	0.16	+2.1
1,518,391	+		IAI47_07190	0.16	+2.9
1,518,392	-		IAI47_07190	0.16	-0.5
1,518,392	-		IAI47_07190	0.16	-0.6
1,518,392	-		IAI47_07190	0.16	-0.4
1,518,392	-		IAI47_07190	0.16	-0.0
1,518,392	-		IAI47_07190	0.16	+0.6
1,518,392	-		IAI47_07190	0.16	-1.1
1,518,392	-		IAI47_07190	0.16	+0.4
1,518,465	+		IAI47_07190	0.24	-0.4
1,518,465	+		IAI47_07190	0.24	+2.3
1,518,513	-		IAI47_07190	0.29	-0.6
1,518,513	-		IAI47_07190	0.29	+0.1
1,518,597	-		IAI47_07190	0.38	+0.5
1,518,646	+		IAI47_07190	0.44	-0.8
1,518,720	+		IAI47_07190	0.52	+1.5
1,518,720	+		IAI47_07190	0.52	+2.3
1,518,720	+		IAI47_07190	0.52	-1.4
1,518,720	+		IAI47_07190	0.52	-1.2
1,518,721	-		IAI47_07190	0.52	-1.1
1,518,721	-		IAI47_07190	0.52	-1.5
1,518,722	+		IAI47_07190	0.52	-1.1
1,518,722	+		IAI47_07190	0.52	+1.6
1,518,722	+		IAI47_07190	0.52	-2.5
1,518,722	+		IAI47_07190	0.52	-1.2
1,518,723	-		IAI47_07190	0.52	-2.1
1,518,788	-		IAI47_07190	0.59	+0.5
1,518,809	-		IAI47_07190	0.62	-1.7
1,518,830	+		IAI47_07190	0.64	+0.8
1,518,830	+		IAI47_07190	0.64	-1.9
1,518,830	+		IAI47_07190	0.64	+1.4
1,518,830	+		IAI47_07190	0.64	+1.5
1,518,831	-		IAI47_07190	0.64	-0.5
1,518,831	-		IAI47_07190	0.64	+0.5
1,518,831	-		IAI47_07190	0.64	-0.1
1,518,831	-		IAI47_07190	0.64	-1.9
1,518,831	-		IAI47_07190	0.64	-1.1
1,518,947	-		IAI47_07190	0.77	+0.9
1,518,957	+		IAI47_07190	0.78	+1.1
1,518,957	+		IAI47_07190	0.78	-1.2
1,518,957	+		IAI47_07190	0.78	-0.9
1,518,957	+		IAI47_07190	0.78	-0.7
1,518,958	-		IAI47_07190	0.78	+1.5
1,518,958	-		IAI47_07190	0.78	+1.1
1,518,958	-		IAI47_07190	0.78	+0.4
1,518,958	-		IAI47_07190	0.78	-0.8
1,519,025	+		IAI47_07190	0.85	+0.3
1,519,025	+		IAI47_07190	0.85	-1.2
1,519,026	-		IAI47_07190	0.85	+0.9
1,519,026	-		IAI47_07190	0.85	+0.5
1,519,026	-		IAI47_07190	0.85	+1.0
1,519,026	-		IAI47_07190	0.85	+1.1
1,519,026	-		IAI47_07190	0.85	+1.4
1,519,028	+		IAI47_07190	0.86	-0.7
1,519,028	+		IAI47_07190	0.86	+1.2
1,519,056	+		IAI47_07190	0.89	+0.4
1,519,070	+				-0.5
1,519,070	+				-2.3