Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06765

Experiment: McCas_formate_complete hypophosphite 62.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete hypophosphite 62.5 mM
1,249,006	-		MMJJ_RS06760	0.71	-1.2
1,249,245	-		MMJJ_RS06760	0.89	-0.8
1,249,271	+				+0.8
1,249,273	+				+0.2
1,249,301	+				+0.8
1,249,305	-				-1.2
1,249,305	-				-0.2
1,249,338	-				+0.0
1,249,343	+				-1.2
1,249,385	+				-1.2
1,249,425	+				+0.5
1,249,451	-				+0.2
1,249,451	-				+1.8
1,249,456	-				-2.6
1,249,460	-				+0.3
1,249,461	+				+1.6
1,249,475	-				+1.0
1,249,490	+				-1.3
1,249,497	+				+1.5
1,249,529	+				+0.3
1,249,567	-				-0.4
1,249,567	-				-2.5
1,249,571	-				+2.5
1,249,583	+				-4.3
1,249,588	+		MMJJ_RS06765	0.10	-1.4
1,249,594	-		MMJJ_RS06765	0.11	-5.1
1,249,616	+		MMJJ_RS06765	0.14	+3.1
1,249,622	+		MMJJ_RS06765	0.15	+1.1
1,249,627	-		MMJJ_RS06765	0.16	+0.8
1,249,627	-		MMJJ_RS06765	0.16	-2.0
1,249,627	-		MMJJ_RS06765	0.16	-0.7
1,249,628	+		MMJJ_RS06765	0.16	+0.0
1,249,628	+		MMJJ_RS06765	0.16	-1.2
1,249,631	-		MMJJ_RS06765	0.16	+0.6
1,249,631	-		MMJJ_RS06765	0.16	-2.7
1,249,631	-				+0.8
1,249,631	-		MMJJ_RS06765	0.16	-0.1
1,249,631	-		MMJJ_RS06765	0.16	+0.6
1,249,632	+		MMJJ_RS06765	0.16	+2.1
1,249,632	+		MMJJ_RS06765	0.16	+0.4
1,249,632	+		MMJJ_RS06765	0.16	+0.3
1,249,637	-		MMJJ_RS06765	0.17	-0.8
1,249,638	+		MMJJ_RS06765	0.17	+3.5
1,249,639	-		MMJJ_RS06765	0.17	+1.8
1,249,639	-		MMJJ_RS06765	0.17	-1.4
1,249,640	+		MMJJ_RS06765	0.17	+1.4
1,249,640	+		MMJJ_RS06765	0.17	-2.3
1,249,649	-		MMJJ_RS06765	0.19	-1.0
1,249,650	+		MMJJ_RS06765	0.19	+0.3
1,249,650	+		MMJJ_RS06765	0.19	+0.6
1,249,676	+		MMJJ_RS06765	0.22	+1.2
1,249,689	-		MMJJ_RS06765	0.24	+1.2
1,249,690	+		MMJJ_RS06765	0.24	+3.3
1,249,690	+		MMJJ_RS06765	0.24	+0.4
1,249,711	-		MMJJ_RS06765	0.27	-1.5
1,249,712	+		MMJJ_RS06765	0.27	-2.4
1,249,731	+		MMJJ_RS06765	0.30	+1.9
1,249,750	+		MMJJ_RS06765	0.32	+0.1
1,249,760	-		MMJJ_RS06765	0.34	+0.7
1,249,760	-		MMJJ_RS06765	0.34	-0.1
1,249,762	-		MMJJ_RS06765	0.34	-0.3
1,249,762	-		MMJJ_RS06765	0.34	-2.9
1,249,763	+		MMJJ_RS06765	0.34	+0.1
1,249,766	-		MMJJ_RS06765	0.34	-0.1
1,249,767	+		MMJJ_RS06765	0.35	+0.3
1,249,783	-		MMJJ_RS06765	0.37	+2.3
1,249,783	-		MMJJ_RS06765	0.37	-1.2
1,249,783	-		MMJJ_RS06765	0.37	-1.0
1,249,783	-		MMJJ_RS06765	0.37	+0.4
1,249,788	+		MMJJ_RS06765	0.37	+0.8
1,249,788	+		MMJJ_RS06765	0.37	+1.0
1,249,789	-		MMJJ_RS06765	0.38	-3.7
1,249,815	-		MMJJ_RS06765	0.41	+2.2
1,249,816	+		MMJJ_RS06765	0.41	+0.7
1,249,816	+		MMJJ_RS06765	0.41	+0.4
1,249,817	-		MMJJ_RS06765	0.41	+0.9
1,249,817	-		MMJJ_RS06765	0.41	+2.3
1,249,821	-		MMJJ_RS06765	0.42	+0.4
1,249,822	+		MMJJ_RS06765	0.42	+0.7
1,249,822	+		MMJJ_RS06765	0.42	+2.2
1,249,822	+		MMJJ_RS06765	0.42	-0.7
1,249,823	-		MMJJ_RS06765	0.42	+0.1
1,249,823	-		MMJJ_RS06765	0.42	-2.0
1,249,824	+		MMJJ_RS06765	0.42	+0.5
1,249,826	-		MMJJ_RS06765	0.43	+2.1
1,249,833	+		MMJJ_RS06765	0.43	+0.3
1,249,864	+		MMJJ_RS06765	0.48	+0.8
1,249,900	-		MMJJ_RS06765	0.53	+1.1
1,250,027	-		MMJJ_RS06765	0.70	+0.3
1,250,028	+		MMJJ_RS06765	0.70	+1.3
1,250,031	-		MMJJ_RS06765	0.70	-1.1
1,250,045	+		MMJJ_RS06765	0.72	-2.9
1,250,062	-		MMJJ_RS06765	0.75	-0.5
1,250,063	+		MMJJ_RS06765	0.75	+1.4
1,250,063	+		MMJJ_RS06765	0.75	+0.3
1,250,108	+		MMJJ_RS06765	0.81	+0.4
1,250,126	-		MMJJ_RS06765	0.83	+0.5
1,250,126	-		MMJJ_RS06765	0.83	+2.1
1,250,127	+		MMJJ_RS06765	0.83	+0.9
1,250,161	-		MMJJ_RS06765	0.88	+0.0
1,250,165	-		MMJJ_RS06765	0.88	+0.8
1,250,165	-		MMJJ_RS06765	0.88	+1.4
1,250,166	+		MMJJ_RS06765	0.89	+1.6
1,250,166	+		MMJJ_RS06765	0.89	+4.0
1,250,169	-		MMJJ_RS06765	0.89	+1.2
1,250,170	+		MMJJ_RS06765	0.89	+0.5
1,250,170	+		MMJJ_RS06765	0.89	+0.7
1,250,220	-				+0.7
1,250,220	-				+1.5
1,250,221	+				+1.7
1,250,221	+				+1.7
1,250,223	+				+3.2
1,250,223	+				+1.2
1,250,231	+				+0.3
1,250,231	+				+1.0
1,250,240	+				+0.9
1,250,297	-				+0.8
1,250,297	-				-0.8
1,250,305	-				-1.8
1,250,306	+				-0.3
1,250,306	+				+0.8
1,250,328	+				+1.2
1,250,365	-				+2.1
1,250,365	-				+0.4
1,250,366	+				+0.7
1,250,366	+				+1.5
1,250,366	+				+0.2
1,250,412	-				+1.3
1,250,517	-		MMJJ_RS06770	0.18	+1.8
1,250,521	-		MMJJ_RS06770	0.19	+1.1
1,250,521	-		MMJJ_RS06770	0.19	-0.9
1,250,521	-		MMJJ_RS06770	0.19	-2.0
1,250,522	+		MMJJ_RS06770	0.19	+2.3
1,250,545	+		MMJJ_RS06770	0.21	-1.5
1,250,591	-		MMJJ_RS06770	0.27	+0.7
1,250,591	-		MMJJ_RS06770	0.27	+1.6
1,250,591	-		MMJJ_RS06770	0.27	+0.3
1,250,592	+		MMJJ_RS06770	0.27	-2.2
1,250,593	-		MMJJ_RS06770	0.27	-0.8
1,250,593	-		MMJJ_RS06770	0.27	+0.8
1,250,594	+		MMJJ_RS06770	0.27	+0.2
1,250,597	+		MMJJ_RS06770	0.28	+1.1
1,250,610	-		MMJJ_RS06770	0.29	+0.3
1,250,669	+		MMJJ_RS06770	0.36	+1.1
1,250,672	-		MMJJ_RS06770	0.37	+1.6
1,250,672	-		MMJJ_RS06770	0.37	+1.0
1,250,672	-		MMJJ_RS06770	0.37	-1.5
1,250,672	-		MMJJ_RS06770	0.37	-0.1
1,250,672	-		MMJJ_RS06770	0.37	+0.0
1,250,673	+		MMJJ_RS06770	0.37	+2.7
1,250,673	+		MMJJ_RS06770	0.37	-0.2
1,250,673	+		MMJJ_RS06770	0.37	+1.6
1,250,673	+		MMJJ_RS06770	0.37	-0.7
1,250,673	+		MMJJ_RS06770	0.37	+0.2
1,250,678	-		MMJJ_RS06770	0.37	-1.5
1,250,678	-		MMJJ_RS06770	0.37	-0.5
1,250,678	-		MMJJ_RS06770	0.37	+0.7
1,250,679	+		MMJJ_RS06770	0.38	+2.4
1,250,702	+		MMJJ_RS06770	0.40	-0.2
1,250,708	-		MMJJ_RS06770	0.41	-0.1
1,250,711	-		MMJJ_RS06770	0.41	+0.0
1,250,712	+		MMJJ_RS06770	0.41	+1.2
1,250,712	+		MMJJ_RS06770	0.41	+0.1
1,250,714	-		MMJJ_RS06770	0.42	+2.0
1,250,715	+		MMJJ_RS06770	0.42	+2.2
1,250,732	-		MMJJ_RS06770	0.44	-0.3
1,250,733	+		MMJJ_RS06770	0.44	-1.5
1,250,733	+		MMJJ_RS06770	0.44	+1.4
1,250,803	-		MMJJ_RS06770	0.52	+1.1
1,250,803	-		MMJJ_RS06770	0.52	+1.9
1,250,815	+		MMJJ_RS06770	0.54	-1.5
1,250,815	+		MMJJ_RS06770	0.54	+0.3
1,250,887	+		MMJJ_RS06770	0.62	+3.6
1,250,910	-		MMJJ_RS06770	0.65	-2.5
1,250,910	-		MMJJ_RS06770	0.65	-2.0
1,250,910	-		MMJJ_RS06770	0.65	-0.3
1,250,910	-		MMJJ_RS06770	0.65	-1.7
1,250,911	+		MMJJ_RS06770	0.65	+0.8
1,250,921	+		MMJJ_RS06770	0.67	+0.8
1,250,922	-		MMJJ_RS06770	0.67	+0.3
1,250,922	-		MMJJ_RS06770	0.67	+1.6
1,250,922	-		MMJJ_RS06770	0.67	-2.8
1,250,922	-		MMJJ_RS06770	0.67	+2.1
1,250,923	+		MMJJ_RS06770	0.67	+1.1
1,250,923	+		MMJJ_RS06770	0.67	-0.5
1,250,923	+		MMJJ_RS06770	0.67	+0.9
1,250,933	-		MMJJ_RS06770	0.68	+2.0
1,250,933	-		MMJJ_RS06770	0.68	+0.1
1,250,934	+		MMJJ_RS06770	0.68	+0.6
1,250,935	-		MMJJ_RS06770	0.68	-0.3
1,250,935	-		MMJJ_RS06770	0.68	+0.0
1,250,941	-		MMJJ_RS06770	0.69	+0.9
1,250,954	-		MMJJ_RS06770	0.71	-1.6
1,250,955	+		MMJJ_RS06770	0.71	+1.9
1,251,002	+		MMJJ_RS06770	0.76	+1.9
1,251,009	+		MMJJ_RS06770	0.77	-0.2
1,251,009	+		MMJJ_RS06770	0.77	-0.0
1,251,017	+		MMJJ_RS06770	0.78	+1.9
1,251,091	-		MMJJ_RS06770	0.87	+0.6
1,251,092	+		MMJJ_RS06770	0.87	+1.0
1,251,095	-		MMJJ_RS06770	0.87	+4.1
1,251,095	-		MMJJ_RS06770	0.87	+0.8
1,251,096	+		MMJJ_RS06770	0.88	+0.2
1,251,096	+		MMJJ_RS06770	0.88	+2.6
1,251,133	-				+0.2
1,251,135	-				+1.8
1,251,135	-				-0.6
1,251,135	-				+0.7
1,251,136	+				-0.2
1,251,170	+				-2.5
1,251,170	+				+0.5
1,251,170	+				+0.5
1,251,170	+				-0.2
1,251,179	-				+1.6
1,251,192	+				+1.7
1,251,203	-				+1.9
1,251,204	+				-1.2
1,251,206	+				+0.8
1,251,206	+				+0.2
1,251,214	-				-0.2
1,251,215	+				+1.1
1,251,237	-				-4.2
1,251,241	-				+1.0