Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08725

Experiment: McCas_formate_complete Polymyxin B sulfate 0.05 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Polymyxin B sulfate 0.05 mM
1,605,701	-		MMJJ_RS08720	0.40	+0.3
1,605,702	+		MMJJ_RS08720	0.41	-2.5
1,605,702	+		MMJJ_RS08720	0.41	-0.2
1,605,702	+		MMJJ_RS08720	0.41	-2.4
1,605,748	-		MMJJ_RS08720	0.44	-0.6
1,605,748	-		MMJJ_RS08720	0.44	-1.4
1,605,749	+		MMJJ_RS08720	0.44	-2.2
1,605,768	+		MMJJ_RS08720	0.46	-3.8
1,605,772	-		MMJJ_RS08720	0.46	-0.8
1,605,773	+		MMJJ_RS08720	0.46	-2.2
1,605,813	+		MMJJ_RS08720	0.49	-3.3
1,605,854	-		MMJJ_RS08720	0.52	-0.8
1,605,855	+		MMJJ_RS08720	0.52	+1.1
1,605,863	-		MMJJ_RS08720	0.53	-3.4
1,605,863	-		MMJJ_RS08720	0.53	-1.6
1,605,868	-		MMJJ_RS08720	0.53	-2.9
1,605,869	+		MMJJ_RS08720	0.53	+1.2
1,605,953	-		MMJJ_RS08720	0.59	-3.1
1,605,979	-		MMJJ_RS08720	0.61	-0.2
1,605,981	-		MMJJ_RS08720	0.62	-3.0
1,605,982	+		MMJJ_RS08720	0.62	-2.0
1,605,982	+		MMJJ_RS08720	0.62	+1.9
1,605,982	+		MMJJ_RS08720	0.62	-1.6
1,605,982	+		MMJJ_RS08720	0.62	-1.0
1,606,002	-		MMJJ_RS08720	0.63	-1.9
1,606,017	-		MMJJ_RS08720	0.64	+2.0
1,606,018	+		MMJJ_RS08720	0.64	-0.8
1,606,023	+		MMJJ_RS08720	0.65	+1.7
1,606,037	-		MMJJ_RS08720	0.66	-4.0
1,606,038	+		MMJJ_RS08720	0.66	-2.7
1,606,066	-		MMJJ_RS08720	0.68	-2.7
1,606,067	+		MMJJ_RS08720	0.68	+1.4
1,606,070	+		MMJJ_RS08720	0.68	+1.9
1,606,079	-		MMJJ_RS08720	0.69	-0.0
1,606,079	-		MMJJ_RS08720	0.69	-3.0
1,606,080	+		MMJJ_RS08720	0.69	-3.1
1,606,086	-		MMJJ_RS08720	0.70	-3.2
1,606,170	+		MMJJ_RS08720	0.76	-0.3
1,606,173	+		MMJJ_RS08720	0.76	-1.5
1,606,173	+		MMJJ_RS08720	0.76	-1.2
1,606,175	-		MMJJ_RS08720	0.76	+0.2
1,606,175	-		MMJJ_RS08720	0.76	-1.5
1,606,176	+		MMJJ_RS08720	0.76	+1.9
1,606,176	+		MMJJ_RS08720	0.76	+0.5
1,606,176	+		MMJJ_RS08720	0.76	-1.7
1,606,176	+		MMJJ_RS08720	0.76	+5.0
1,606,191	-		MMJJ_RS08720	0.77	-2.2
1,606,191	-		MMJJ_RS08720	0.77	-4.0
1,606,194	-		MMJJ_RS08720	0.78	-0.0
1,606,202	+		MMJJ_RS08720	0.78	-1.2
1,606,207	-		MMJJ_RS08720	0.79	-1.4
1,606,207	-		MMJJ_RS08720	0.79	-0.2
1,606,208	+		MMJJ_RS08720	0.79	-0.8
1,606,208	+		MMJJ_RS08720	0.79	-1.2
1,606,208	+		MMJJ_RS08720	0.79	-1.4
1,606,209	-		MMJJ_RS08720	0.79	-3.0
1,606,236	-		MMJJ_RS08720	0.81	+1.2
1,606,236	-		MMJJ_RS08720	0.81	-3.2
1,606,236	-		MMJJ_RS08720	0.81	+6.5
1,606,237	+		MMJJ_RS08720	0.81	-1.2
1,606,237	+		MMJJ_RS08720	0.81	-0.4
1,606,237	+		MMJJ_RS08720	0.81	-1.8
1,606,237	+		MMJJ_RS08720	0.81	+4.6
1,606,239	-		MMJJ_RS08720	0.81	-1.8
1,606,239	-		MMJJ_RS08720	0.81	-2.4
1,606,239	-		MMJJ_RS08720	0.81	+0.3
1,606,240	+		MMJJ_RS08720	0.81	+2.1
1,606,240	+		MMJJ_RS08720	0.81	-2.2
1,606,240	+		MMJJ_RS08720	0.81	-1.9
1,606,241	-		MMJJ_RS08720	0.81	-1.7
1,606,241	-		MMJJ_RS08720	0.81	-2.7
1,606,241	-		MMJJ_RS08720	0.81	+0.9
1,606,241	-		MMJJ_RS08720	0.81	-0.9
1,606,241	-		MMJJ_RS08720	0.81	-2.5
1,606,242	+		MMJJ_RS08720	0.81	+1.7
1,606,242	+		MMJJ_RS08720	0.81	-0.8
1,606,242	+		MMJJ_RS08720	0.81	-0.7
1,606,243	-		MMJJ_RS08720	0.81	-3.3
1,606,243	-		MMJJ_RS08720	0.81	-1.8
1,606,243	-		MMJJ_RS08720	0.81	+3.3
1,606,244	+		MMJJ_RS08720	0.81	-0.8
1,606,301	-		MMJJ_RS08720	0.86	-1.5
1,606,301	-		MMJJ_RS08720	0.86	+0.2
1,606,302	+		MMJJ_RS08720	0.86	-2.8
1,606,303	-		MMJJ_RS08720	0.86	-1.4
1,606,303	-		MMJJ_RS08720	0.86	-2.0
1,606,335	-		MMJJ_RS08720	0.88	+0.6
1,606,354	+		MMJJ_RS08720	0.90	-2.4
1,606,363	-				-3.0
1,606,363	-				-2.5
1,606,387	+				-1.7
1,606,425	-				+1.5
1,606,427	-				-1.2
1,606,428	+				-0.5
1,606,428	+				-2.5
1,606,501	-				+0.8
1,606,501	-				+0.8
1,606,501	-				-0.4
1,606,501	-				-0.1
1,606,502	+				-1.8
1,606,504	+				-0.8
1,606,504	+				-2.2
1,606,505	-				-1.8
1,606,505	-				-0.4
1,606,505	-				-2.5
1,606,506	+				-2.4
1,606,506	+				-3.1
1,606,516	+				+2.2
1,606,542	+				-0.2
1,606,554	-				-2.8
1,606,656	-				-3.2
1,606,656	-				-0.8
1,606,657	+				+0.4
1,606,657	+				-3.3
1,606,666	-				-2.8
1,606,775	-				+0.8
1,606,775	-				-1.2
1,606,776	+				-0.2
1,606,866	-		MMJJ_RS08725	0.14	-0.2
1,606,877	+		MMJJ_RS08725	0.14	-0.8
1,606,881	+		MMJJ_RS08725	0.15	-0.8
1,606,881	+		MMJJ_RS08725	0.15	-1.2
1,606,896	+		MMJJ_RS08725	0.16	-2.7
1,606,919	-		MMJJ_RS08725	0.17	-0.8
1,606,920	+		MMJJ_RS08725	0.17	+0.8
1,606,920	+		MMJJ_RS08725	0.17	+0.2
1,606,942	+		MMJJ_RS08725	0.19	+0.8
1,606,952	-		MMJJ_RS08725	0.19	-0.8
1,606,953	+		MMJJ_RS08725	0.19	-2.2
1,607,000	+		MMJJ_RS08725	0.22	-2.0
1,607,000	+		MMJJ_RS08725	0.22	-0.5
1,607,000	+		MMJJ_RS08725	0.22	-0.2
1,607,000	+		MMJJ_RS08725	0.22	+0.8
1,607,003	+		MMJJ_RS08725	0.23	-4.7
1,607,003	+		MMJJ_RS08725	0.23	-2.7
1,607,003	+				-0.8
1,607,061	-		MMJJ_RS08725	0.26	-1.7
1,607,062	+		MMJJ_RS08725	0.27	-2.8
1,607,091	-		MMJJ_RS08725	0.28	-2.5
1,607,091	-		MMJJ_RS08725	0.28	-1.8
1,607,092	+		MMJJ_RS08725	0.29	+1.8
1,607,092	+		MMJJ_RS08725	0.29	-1.5
1,607,113	+		MMJJ_RS08725	0.30	-1.8
1,607,115	-		MMJJ_RS08725	0.30	-0.8
1,607,115	-		MMJJ_RS08725	0.30	-0.4
1,607,115	-		MMJJ_RS08725	0.30	-1.8
1,607,115	-		MMJJ_RS08725	0.30	-2.2
1,607,116	+		MMJJ_RS08725	0.30	-1.2
1,607,116	+		MMJJ_RS08725	0.30	+0.8
1,607,116	+		MMJJ_RS08725	0.30	+0.8
1,607,116	+		MMJJ_RS08725	0.30	-1.1
1,607,116	+		MMJJ_RS08725	0.30	-2.0
1,607,116	+				+0.8
1,607,116	+		MMJJ_RS08725	0.30	-2.4
1,607,117	-		MMJJ_RS08725	0.30	-1.4
1,607,117	-		MMJJ_RS08725	0.30	-3.0
1,607,118	+		MMJJ_RS08725	0.30	-1.4
1,607,152	+		MMJJ_RS08725	0.32	-2.5
1,607,152	+		MMJJ_RS08725	0.32	-0.8
1,607,164	+		MMJJ_RS08725	0.33	-2.0
1,607,181	+		MMJJ_RS08725	0.34	-1.5
1,607,186	-		MMJJ_RS08725	0.35	+0.8
1,607,186	-		MMJJ_RS08725	0.35	-2.4
1,607,201	-		MMJJ_RS08725	0.36	+0.8
1,607,202	+		MMJJ_RS08725	0.36	-0.2
1,607,202	+		MMJJ_RS08725	0.36	+0.4
1,607,221	+		MMJJ_RS08725	0.37	-0.2
1,607,278	-				+2.4
1,607,279	+		MMJJ_RS08725	0.41	-1.0
1,607,279	+		MMJJ_RS08725	0.41	-0.8
1,607,279	+		MMJJ_RS08725	0.41	-2.4
1,607,280	-		MMJJ_RS08725	0.41	-0.8
1,607,280	-		MMJJ_RS08725	0.41	-1.2
1,607,280	-		MMJJ_RS08725	0.41	-0.8
1,607,280	-		MMJJ_RS08725	0.41	+0.8
1,607,280	-		MMJJ_RS08725	0.41	-1.3
1,607,280	-		MMJJ_RS08725	0.41	-2.8
1,607,280	-		MMJJ_RS08725	0.41	-0.2
1,607,280	-		MMJJ_RS08725	0.41	-2.4
1,607,280	-		MMJJ_RS08725	0.41	-1.8
1,607,280	-		MMJJ_RS08725	0.41	-3.2
1,607,280	-				+0.8
1,607,280	-		MMJJ_RS08725	0.41	-3.1
1,607,280	-		MMJJ_RS08725	0.41	+0.8
1,607,280	-		MMJJ_RS08725	0.41	-0.8
1,607,281	+		MMJJ_RS08725	0.41	-3.4
1,607,281	+		MMJJ_RS08725	0.41	-0.8
1,607,281	+		MMJJ_RS08725	0.41	-1.5
1,607,281	+		MMJJ_RS08725	0.41	+0.3
1,607,281	+		MMJJ_RS08725	0.41	-0.2
1,607,284	-		MMJJ_RS08725	0.41	-1.2
1,607,284	-		MMJJ_RS08725	0.41	-1.2
1,607,284	-		MMJJ_RS08725	0.41	-2.4
1,607,284	-		MMJJ_RS08725	0.41	-2.0
1,607,285	+				-0.8
1,607,286	-		MMJJ_RS08725	0.41	-0.8
1,607,361	+		MMJJ_RS08725	0.46	+0.8
1,607,361	+		MMJJ_RS08725	0.46	-1.2
1,607,361	+		MMJJ_RS08725	0.46	-3.2
1,607,364	-		MMJJ_RS08725	0.46	-1.5
1,607,364	-		MMJJ_RS08725	0.46	+1.0
1,607,365	+		MMJJ_RS08725	0.47	-3.2
1,607,365	+		MMJJ_RS08725	0.47	+0.8
1,607,382	-		MMJJ_RS08725	0.48	-1.2
1,607,382	-		MMJJ_RS08725	0.48	+0.2
1,607,383	+		MMJJ_RS08725	0.48	-1.9
1,607,406	+		MMJJ_RS08725	0.49	-1.8
1,607,429	-		MMJJ_RS08725	0.51	-2.4
1,607,454	+		MMJJ_RS08725	0.52	-1.8
1,607,471	+		MMJJ_RS08725	0.54	-2.0
1,607,472	-		MMJJ_RS08725	0.54	-0.8
1,607,473	+				+0.8
1,607,509	-		MMJJ_RS08725	0.56	+1.0
1,607,607	+				+0.8
1,607,612	-		MMJJ_RS08725	0.63	-3.2
1,607,640	-		MMJJ_RS08725	0.65	-3.3
1,607,656	-		MMJJ_RS08725	0.66	-2.7
1,607,657	+		MMJJ_RS08725	0.66	-2.2
1,607,657	+		MMJJ_RS08725	0.66	-0.0
1,607,670	-		MMJJ_RS08725	0.67	-0.2
1,607,698	-		MMJJ_RS08725	0.69	-3.3
1,607,718	-		MMJJ_RS08725	0.70	-0.8
1,607,718	-		MMJJ_RS08725	0.70	-2.2
1,607,761	+		MMJJ_RS08725	0.73	-2.9
1,607,761	+		MMJJ_RS08725	0.73	+0.9
1,607,761	+		MMJJ_RS08725	0.73	+0.8
1,607,763	-		MMJJ_RS08725	0.73	-0.2
1,607,765	-		MMJJ_RS08725	0.73	-1.2
1,607,766	+		MMJJ_RS08725	0.73	-1.2
1,607,801	-		MMJJ_RS08725	0.75	-0.0
1,607,802	+		MMJJ_RS08725	0.75	-2.2
1,607,804	-		MMJJ_RS08725	0.76	-3.8
1,607,821	-		MMJJ_RS08725	0.77	-3.4
1,607,844	-		MMJJ_RS08725	0.78	-2.9
1,607,850	-		MMJJ_RS08725	0.79	+0.2
1,607,855	-		MMJJ_RS08725	0.79	-2.4
1,607,855	-		MMJJ_RS08725	0.79	-2.7
1,607,955	-		MMJJ_RS08725	0.85	-0.2
1,607,957	-		MMJJ_RS08725	0.86	-1.5
1,607,958	+		MMJJ_RS08725	0.86	+1.3
1,608,002	-		MMJJ_RS08725	0.89	-0.2
1,608,099	+				-1.5
1,608,116	-				+0.5
1,608,116	-				-0.2
1,608,117	+				-3.3
1,608,117	+				+0.8
1,608,117	+				-0.8
1,608,132	+				+1.2
1,608,147	+				-0.8
1,608,172	-				-0.5
1,608,180	-				-2.3
1,608,185	+				+0.6
1,608,185	+				-2.9
1,608,187	+				-1.6
1,608,187	+				-0.2
1,608,205	-				+0.8
1,608,208	-				-2.2
1,608,208	-				-0.2
1,608,226	+				-0.7
1,608,260	+				-0.1
1,608,263	-				+0.2
1,608,271	-				-0.7
1,608,271	-				+0.6
1,608,272	+				-1.2
1,608,272	+				+0.8
1,608,272	+				-2.5
1,608,273	-				+0.7
1,608,294	-				-0.8
1,608,303	+				+0.4
1,608,306	-				+2.6
1,608,329	-				+0.1
1,608,330	+				+1.3
1,608,332	-				+1.5
1,608,335	-				-0.0
1,608,336	+				+1.9
1,608,336	+				-2.7
1,608,336	+				-0.5
1,608,336	+				+1.8
1,608,336	+				-1.2
1,608,355	-				-0.4
1,608,356	+				+0.3
1,608,390	-				+1.2
1,608,391	+				-2.0
1,608,411	+				+0.2
1,608,445	-		MMJJ_RS08730	0.12	+0.7
1,608,452	-		MMJJ_RS08730	0.13	-2.8
1,608,466	-		MMJJ_RS08730	0.14	-1.2
1,608,468	-		MMJJ_RS08730	0.14	-1.6
1,608,468	-		MMJJ_RS08730	0.14	-1.3
1,608,468	-		MMJJ_RS08730	0.14	-0.2
1,608,468	-		MMJJ_RS08730	0.14	+0.4
1,608,469	+		MMJJ_RS08730	0.14	-1.2
1,608,469	+		MMJJ_RS08730	0.14	+0.9
1,608,469	+		MMJJ_RS08730	0.14	+0.8
1,608,476	+		MMJJ_RS08730	0.15	-0.2
1,608,477	-		MMJJ_RS08730	0.15	-0.5
1,608,477	-		MMJJ_RS08730	0.15	-1.4
1,608,478	+		MMJJ_RS08730	0.15	-0.2
1,608,478	+		MMJJ_RS08730	0.15	+2.1
1,608,503	+		MMJJ_RS08730	0.17	+0.2
1,608,537	-		MMJJ_RS08730	0.21	+1.5
1,608,537	-		MMJJ_RS08730	0.21	+0.7
1,608,539	-		MMJJ_RS08730	0.21	+0.8
1,608,548	-		MMJJ_RS08730	0.22	+0.6
1,608,549	+		MMJJ_RS08730	0.22	+1.2
1,608,592	-		MMJJ_RS08730	0.26	-2.7
1,608,609	-		MMJJ_RS08730	0.27	-3.3
1,608,610	+		MMJJ_RS08730	0.28	-1.9
1,608,637	+		MMJJ_RS08730	0.30	+1.1
1,608,642	+		MMJJ_RS08730	0.31	+5.8
1,608,746	-		MMJJ_RS08730	0.40	-3.0
1,608,753	+		MMJJ_RS08730	0.41	-1.2
1,608,799	+		MMJJ_RS08730	0.45	-0.9
1,608,852	-		MMJJ_RS08730	0.50	+1.5
1,608,853	+		MMJJ_RS08730	0.50	-2.2
1,608,853	+		MMJJ_RS08730	0.50	+0.8
1,608,853	+		MMJJ_RS08730	0.50	+0.2
1,608,886	-		MMJJ_RS08730	0.53	+0.9
1,608,910	-		MMJJ_RS08730	0.56	-2.0
1,608,925	-		MMJJ_RS08730	0.57	+2.9
1,608,926	+		MMJJ_RS08730	0.57	-0.2
1,608,973	+		MMJJ_RS08730	0.62	+2.7
1,608,978	+		MMJJ_RS08730	0.62	-3.7
1,608,978	+		MMJJ_RS08730	0.62	+1.8
1,609,028	+		MMJJ_RS08730	0.67	+2.8
1,609,028	+		MMJJ_RS08730	0.67	-0.5
1,609,032	-		MMJJ_RS08730	0.67	+0.9
1,609,032	-		MMJJ_RS08730	0.67	-0.3
1,609,032	-		MMJJ_RS08730	0.67	-2.7
1,609,032	-		MMJJ_RS08730	0.67	+0.8
1,609,033	+		MMJJ_RS08730	0.67	-1.4
1,609,033	+		MMJJ_RS08730	0.67	+1.5
1,609,036	-		MMJJ_RS08730	0.68	-3.1
1,609,037	+		MMJJ_RS08730	0.68	-0.5
1,609,040	-		MMJJ_RS08730	0.68	+0.7
1,609,040	-		MMJJ_RS08730	0.68	+2.3
1,609,040	-		MMJJ_RS08730	0.68	+0.8
1,609,041	+		MMJJ_RS08730	0.68	+1.6
1,609,041	+		MMJJ_RS08730	0.68	+1.2
1,609,041	+		MMJJ_RS08730	0.68	+2.0
1,609,041	+		MMJJ_RS08730	0.68	-2.9
1,609,042	-		MMJJ_RS08730	0.68	+2.2
1,609,042	-		MMJJ_RS08730	0.68	+1.5
1,609,042	-		MMJJ_RS08730	0.68	+0.6
1,609,054	-		MMJJ_RS08730	0.69	+1.6
1,609,066	+		MMJJ_RS08730	0.70	+1.2