Strain Fitness in Pantoea sp. MT58 around IAI47_17255

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,656,873	+		IAI47_17250	0.32	-1.3
3,656,921	+		IAI47_17250	0.36	+0.4
3,656,921	+		IAI47_17250	0.36	+2.4
3,656,922	-		IAI47_17250	0.36	+0.6
3,656,966	-		IAI47_17250	0.40	+0.5
3,657,048	+		IAI47_17250	0.47	+1.0
3,657,049	-		IAI47_17250	0.47	+0.5
3,657,049	-		IAI47_17250	0.47	-1.5
3,657,049	-		IAI47_17250	0.47	-0.1
3,657,097	+		IAI47_17250	0.51	-0.3
3,657,177	+		IAI47_17250	0.59	-3.1
3,657,178	-		IAI47_17250	0.59	-0.0
3,657,195	-		IAI47_17250	0.60	-1.5
3,657,242	+		IAI47_17250	0.64	-0.1
3,657,243	-		IAI47_17250	0.64	+1.2
3,657,317	+		IAI47_17250	0.71	-0.6
3,657,317	+		IAI47_17250	0.71	+1.3
3,657,317	+		IAI47_17250	0.71	-0.1
3,657,317	+		IAI47_17250	0.71	-0.6
3,657,317	+		IAI47_17250	0.71	+1.3
3,657,318	-		IAI47_17250	0.71	-1.1
3,657,318	-		IAI47_17250	0.71	+0.4
3,657,318	-		IAI47_17250	0.71	-0.6
3,657,318	-		IAI47_17250	0.71	+0.3
3,657,359	+		IAI47_17250	0.75	-0.6
3,657,359	+		IAI47_17250	0.75	+0.3
3,657,359	+		IAI47_17250	0.75	-0.0
3,657,359	+		IAI47_17250	0.75	-1.6
3,657,359	+		IAI47_17250	0.75	+0.0
3,657,360	-		IAI47_17250	0.75	+0.2
3,657,360	-		IAI47_17250	0.75	+0.9
3,657,416	+		IAI47_17250	0.80	+0.2
3,657,416	+		IAI47_17250	0.80	+0.5
3,657,416	+		IAI47_17250	0.80	+0.6
3,657,416	+		IAI47_17250	0.80	-0.5
3,657,416	+		IAI47_17250	0.80	+0.3
3,657,416	+		IAI47_17250	0.80	+2.7
3,657,416	+		IAI47_17250	0.80	+0.9
3,657,416	+		IAI47_17250	0.80	-0.7
3,657,416	+		IAI47_17250	0.80	+0.9
3,657,416	+		IAI47_17250	0.80	+0.5
3,657,416	+		IAI47_17250	0.80	+1.6
3,657,417	-		IAI47_17250	0.80	-0.0
3,657,417	-		IAI47_17250	0.80	+0.6
3,657,417	-		IAI47_17250	0.80	-1.9
3,657,417	-		IAI47_17250	0.80	+1.7
3,657,417	-		IAI47_17250	0.80	+0.6
3,657,417	-		IAI47_17250	0.80	+0.1
3,657,417	-		IAI47_17250	0.80	+0.3
3,657,417	-		IAI47_17250	0.80	+1.8
3,657,417	-		IAI47_17250	0.80	+3.8
3,657,417	-		IAI47_17250	0.80	-0.6
3,657,417	-		IAI47_17250	0.80	-0.6
3,657,417	-		IAI47_17250	0.80	-0.3
3,657,417	-		IAI47_17250	0.80	+0.1
3,657,417	-		IAI47_17250	0.80	+0.7
3,657,417	-		IAI47_17250	0.80	+1.4
3,657,417	-		IAI47_17250	0.80	+0.9
3,657,418	+		IAI47_17250	0.80	-0.6
3,657,418	+		IAI47_17250	0.80	-0.1
3,657,418	+		IAI47_17250	0.80	-1.7
3,657,418	+		IAI47_17250	0.80	+1.9
3,657,418	+		IAI47_17250	0.80	+0.4
3,657,418	+		IAI47_17250	0.80	+1.0
3,657,418	+		IAI47_17250	0.80	-0.7
3,657,418	+		IAI47_17250	0.80	+1.4
3,657,418	+		IAI47_17250	0.80	+0.3
3,657,418	+		IAI47_17250	0.80	+1.1
3,657,418	+		IAI47_17250	0.80	+0.4
3,657,418	+		IAI47_17250	0.80	+1.8
3,657,419	-		IAI47_17250	0.80	+1.4
3,657,419	-		IAI47_17250	0.80	+0.6
3,657,419	-		IAI47_17250	0.80	+0.5
3,657,419	-		IAI47_17250	0.80	-0.3
3,657,419	-		IAI47_17250	0.80	-1.0
3,657,419	-		IAI47_17250	0.80	+1.4
3,657,419	-		IAI47_17250	0.80	-0.0
3,657,429	+		IAI47_17250	0.81	-1.9
3,657,429	+		IAI47_17250	0.81	+1.2
3,657,430	-		IAI47_17250	0.81	-0.4
3,657,557	+				+0.9
3,657,558	-				-1.3
3,657,573	+				-1.1
3,657,573	+				-2.2
3,657,573	+				+0.3
3,657,573	+				+1.7
3,657,573	+				-1.3
3,657,573	+				+0.1
3,657,573	+				+1.9
3,657,573	+				+0.9
3,657,574	-				-1.2
3,657,574	-				+3.0
3,657,616	+				-1.1
3,657,617	-				-2.2
3,657,680	+				-0.7
3,657,680	+				-0.0
3,657,681	-				+0.1
3,657,709	+				+0.0
3,657,709	+				-0.7
3,657,709	+				-0.7
3,657,709	+				+2.8
3,657,710	-				+1.4
3,657,710	-				-0.3
3,657,710	-				-0.2
3,657,710	-				+0.0
3,657,710	-				-0.1
3,657,714	+				+1.1
3,657,714	+				+1.2
3,657,714	+				-1.2
3,657,714	+				+0.6
3,657,714	+				-1.9
3,657,714	+				-0.8
3,657,714	+				+1.9
3,657,715	-				+1.6
3,657,715	-				-0.7
3,657,715	-				+3.2
3,657,715	-				+0.1
3,657,715	-				-0.3
3,657,745	+				-0.3
3,657,745	+				-0.3
3,657,745	+				-0.4
3,657,758	+				+0.2
3,657,758	+				-1.1
3,657,760	+				+1.3
3,657,760	+				+0.8
3,657,760	+				-2.3
3,657,760	+				-1.0
3,657,760	+				+0.9
3,657,760	+				-2.0
3,657,761	-				-2.0
3,657,761	-				-2.3
3,657,761	-				-2.0
3,657,761	-				-1.6
3,657,761	-				-2.5
3,657,761	-				+0.1
3,657,761	-				-2.7
3,657,761	-				-0.7
3,657,767	+				+0.3
3,657,767	+				+0.8
3,657,767	+				-0.4
3,657,767	+				+0.5
3,657,791	+				+0.8
3,657,791	+				+0.3
3,658,112	-		IAI47_17255	0.72	-2.3
3,658,171	+		IAI47_17255	0.87	-0.8
3,658,172	-		IAI47_17255	0.87	-1.1
3,658,172	-		IAI47_17255	0.87	-0.3
3,658,222	+				-0.6
3,658,223	-				+1.1
3,658,297	+				+0.7
3,658,297	+				+0.4
3,658,298	-				-0.7
3,658,298	-				-0.4
3,658,330	+				+0.4
3,658,330	+				+1.0
3,658,330	+				-0.6
3,658,330	+				-1.0
3,658,331	-				+0.4
3,658,331	-				-0.1
3,658,331	-				-0.4
3,658,331	-				-0.3
3,658,331	-				-0.0
3,658,358	+				+0.9
3,658,367	-				-1.6
3,658,367	-				+1.4
3,658,377	-				+2.9
3,658,539	-		IAI47_17260	0.15	+0.1
3,658,539	-		IAI47_17260	0.15	-1.1
3,658,553	+		IAI47_17260	0.16	-0.9
3,658,586	+		IAI47_17260	0.18	+0.5
3,658,628	+		IAI47_17260	0.21	-1.1
3,658,628	+		IAI47_17260	0.21	+0.1
3,658,628	+		IAI47_17260	0.21	-0.1
3,658,629	-		IAI47_17260	0.21	+0.6
3,658,629	-		IAI47_17260	0.21	-0.0
3,658,629	-		IAI47_17260	0.21	+0.7
3,658,629	-		IAI47_17260	0.21	-0.3
3,658,647	+		IAI47_17260	0.23	-0.3
3,658,648	-		IAI47_17260	0.23	-2.3
3,658,648	-		IAI47_17260	0.23	-0.4
3,658,651	+		IAI47_17260	0.23	+0.9
3,658,651	+		IAI47_17260	0.23	+0.0
3,658,651	+		IAI47_17260	0.23	-1.0
3,658,651	+		IAI47_17260	0.23	+1.2
3,658,652	-		IAI47_17260	0.23	-0.4
3,658,652	-		IAI47_17260	0.23	-0.7
3,658,652	-		IAI47_17260	0.23	+1.6
3,658,685	+		IAI47_17260	0.25	-1.6
3,658,685	+		IAI47_17260	0.25	+1.3
3,658,685	+		IAI47_17260	0.25	-0.3
3,658,685	+		IAI47_17260	0.25	+1.0
3,658,686	-		IAI47_17260	0.26	+1.5
3,658,696	+		IAI47_17260	0.26	-0.7
3,658,696	+		IAI47_17260	0.26	+1.5
3,658,696	+		IAI47_17260	0.26	+1.6
3,658,697	-		IAI47_17260	0.26	-0.9
3,658,697	-		IAI47_17260	0.26	-0.8
3,658,719	+		IAI47_17260	0.28	+0.5
3,658,720	-		IAI47_17260	0.28	+0.3
3,658,720	-		IAI47_17260	0.28	-0.4
3,658,720	-		IAI47_17260	0.28	-2.0
3,658,720	-		IAI47_17260	0.28	-1.3
3,658,720	-		IAI47_17260	0.28	-2.0
3,658,720	-		IAI47_17260	0.28	-1.9
3,658,720	-		IAI47_17260	0.28	-0.9
3,658,793	+		IAI47_17260	0.33	+1.6
3,658,793	+		IAI47_17260	0.33	+0.4
3,658,896	-		IAI47_17260	0.41	+0.9
3,658,946	+		IAI47_17260	0.44	+0.1
3,658,947	-		IAI47_17260	0.45	+0.1
3,658,947	-		IAI47_17260	0.45	-0.6
3,658,976	+		IAI47_17260	0.47	+0.5
3,659,022	-		IAI47_17260	0.50	+1.7
3,659,087	+		IAI47_17260	0.55	-0.8
3,659,087	+		IAI47_17260	0.55	+1.0
3,659,087	+		IAI47_17260	0.55	-1.5
3,659,087	+		IAI47_17260	0.55	+0.6
3,659,087	+		IAI47_17260	0.55	+0.7
3,659,150	+		IAI47_17260	0.59	-0.2
3,659,153	+		IAI47_17260	0.60	+0.7
3,659,153	+		IAI47_17260	0.60	+1.9
3,659,153	+		IAI47_17260	0.60	-0.3
3,659,154	-		IAI47_17260	0.60	+1.2
3,659,154	-		IAI47_17260	0.60	-1.6
3,659,184	-		IAI47_17260	0.62	-2.9
3,659,192	+		IAI47_17260	0.62	+1.2
3,659,192	+		IAI47_17260	0.62	+2.1
3,659,192	+		IAI47_17260	0.62	+1.2
3,659,192	+		IAI47_17260	0.62	+2.0
3,659,193	-		IAI47_17260	0.62	-0.1