Strain Fitness in Pantoea sp. MT58 around IAI47_15880

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,350,876	+				-1.0
3,350,876	+				-0.4
3,350,876	+				+0.4
3,350,877	-				-1.0
3,350,877	-				-1.0
3,350,877	-				+0.3
3,350,877	-				-1.2
3,350,879	+				-0.4
3,350,879	+				-0.9
3,350,879	+				-0.5
3,350,879	+				-2.2
3,350,879	+				+0.7
3,350,880	-				-0.4
3,350,880	-				-0.9
3,350,888	+				+0.2
3,350,888	+				+1.8
3,350,888	+				-2.9
3,350,888	+				+1.2
3,350,888	+				-1.4
3,350,888	+				-0.9
3,350,889	-				-0.6
3,350,889	-				-0.0
3,350,889	-				+0.7
3,350,889	-				+0.4
3,350,889	-				-0.9
3,350,958	-		IAI47_15875	0.10	+1.2
3,350,958	-		IAI47_15875	0.10	-2.2
3,350,965	+		IAI47_15875	0.11	-0.6
3,350,965	+		IAI47_15875	0.11	+0.6
3,350,965	+		IAI47_15875	0.11	+1.4
3,350,965	+		IAI47_15875	0.11	-1.1
3,350,966	-		IAI47_15875	0.11	+0.5
3,350,980	+		IAI47_15875	0.13	-3.0
3,350,981	-		IAI47_15875	0.13	-0.8
3,350,981	-		IAI47_15875	0.13	-1.2
3,350,981	-		IAI47_15875	0.13	-0.0
3,350,988	-		IAI47_15875	0.14	+0.2
3,351,145	+		IAI47_15875	0.35	-1.1
3,351,145	+		IAI47_15875	0.35	+0.8
3,351,145	+		IAI47_15875	0.35	-0.4
3,351,145	+		IAI47_15875	0.35	-0.9
3,351,146	-		IAI47_15875	0.35	+0.8
3,351,146	-		IAI47_15875	0.35	-0.9
3,351,167	+		IAI47_15875	0.38	+1.9
3,351,168	-		IAI47_15875	0.38	+0.1
3,351,204	-		IAI47_15875	0.43	-2.1
3,351,394	+		IAI47_15875	0.69	-0.9
3,351,394	+		IAI47_15875	0.69	-0.1
3,351,395	-		IAI47_15875	0.69	+1.2
3,351,428	+		IAI47_15875	0.73	+0.4
3,351,429	-		IAI47_15875	0.73	+2.5
3,351,429	-		IAI47_15875	0.73	-0.1
3,351,453	+		IAI47_15875	0.77	-0.1
3,351,462	-		IAI47_15875	0.78	-1.1
3,351,496	+		IAI47_15875	0.82	-0.5
3,351,516	+		IAI47_15875	0.85	+1.4
3,351,516	+		IAI47_15875	0.85	-0.9
3,351,516	+		IAI47_15875	0.85	+0.9
3,351,536	+		IAI47_15875	0.88	-0.7
3,351,536	+		IAI47_15875	0.88	-0.3
3,351,536	+		IAI47_15875	0.88	+1.1
3,351,536	+		IAI47_15875	0.88	-0.2
3,351,536	+		IAI47_15875	0.88	+0.1
3,351,560	+				-0.2
3,351,560	+				+0.4
3,351,572	+				-0.7
3,351,602	+				-0.3
3,351,603	-				+0.0
3,351,624	+				+1.2
3,351,624	+				-0.2
3,351,624	+				-0.4
3,351,625	-				+0.7
3,351,625	-				-1.0
3,351,625	-				-0.4
3,351,630	+				+2.4
3,351,630	+				-0.3
3,351,630	+				-0.4
3,351,630	+				-0.9
3,351,630	+				+1.0
3,351,630	+				-0.6
3,351,631	-				+0.0
3,351,631	-				-0.4
3,351,631	-				-1.6
3,351,631	-				+0.9
3,351,631	-				-0.8
3,351,724	+		IAI47_15880	0.45	+0.6
3,351,724	+		IAI47_15880	0.45	+5.1
3,351,739	+		IAI47_15880	0.53	-0.7
3,351,740	-		IAI47_15880	0.53	-0.4
3,351,740	-		IAI47_15880	0.53	-0.5
3,351,740	-		IAI47_15880	0.53	+0.8
3,351,794	-		IAI47_15880	0.80	-0.9
3,351,833	+				-0.4
3,351,833	+				-1.3
3,351,834	-				+1.4
3,352,035	+		IAI47_15885	0.43	-0.6
3,352,035	+		IAI47_15885	0.43	+0.3
3,352,035	+		IAI47_15885	0.43	-0.4
3,352,035	+		IAI47_15885	0.43	-2.2
3,352,035	+		IAI47_15885	0.43	+0.3
3,352,035	+		IAI47_15885	0.43	+1.1
3,352,035	+		IAI47_15885	0.43	-1.4
3,352,035	+		IAI47_15885	0.43	-0.1
3,352,036	-		IAI47_15885	0.44	-0.4
3,352,036	-		IAI47_15885	0.44	+1.6
3,352,036	-		IAI47_15885	0.44	-1.7
3,352,036	-		IAI47_15885	0.44	-0.4
3,352,036	-		IAI47_15885	0.44	-1.7
3,352,036	-		IAI47_15885	0.44	+1.6
3,352,036	-		IAI47_15885	0.44	+0.0
3,352,036	-		IAI47_15885	0.44	+0.1
3,352,106	+		IAI47_15885	0.61	+0.2
3,352,106	+		IAI47_15885	0.61	-0.6
3,352,106	+		IAI47_15885	0.61	+1.5
3,352,107	-		IAI47_15885	0.62	-0.0
3,352,107	-		IAI47_15885	0.62	+2.7
3,352,107	-		IAI47_15885	0.62	-2.9
3,352,165	+		IAI47_15885	0.76	-0.6
3,352,165	+		IAI47_15885	0.76	+1.3
3,352,165	+		IAI47_15885	0.76	-0.8
3,352,165	+		IAI47_15885	0.76	+0.5
3,352,165	+		IAI47_15885	0.76	+0.9
3,352,166	-		IAI47_15885	0.77	-1.3
3,352,166	-		IAI47_15885	0.77	-0.3
3,352,166	-		IAI47_15885	0.77	-1.2
3,352,176	+		IAI47_15885	0.79	+0.2
3,352,176	+		IAI47_15885	0.79	+1.2
3,352,176	+		IAI47_15885	0.79	-0.3
3,352,176	+		IAI47_15885	0.79	-1.7
3,352,176	+		IAI47_15885	0.79	+0.5
3,352,176	+		IAI47_15885	0.79	+1.2
3,352,176	+		IAI47_15885	0.79	-0.6
3,352,177	-		IAI47_15885	0.79	+0.3
3,352,177	-		IAI47_15885	0.79	+2.5
3,352,177	-		IAI47_15885	0.79	-1.4
3,352,177	-		IAI47_15885	0.79	-0.1
3,352,177	-		IAI47_15885	0.79	-2.5
3,352,177	-		IAI47_15885	0.79	-0.4
3,352,213	+		IAI47_15885	0.88	-0.4
3,352,214	-		IAI47_15885	0.89	-2.0
3,352,272	+				-0.7
3,352,275	+				-1.6
3,352,275	+				+0.5
3,352,275	+				-2.6
3,352,275	+				-2.4
3,352,275	+				-0.9
3,352,275	+				-0.8
3,352,275	+				-1.1
3,352,275	+				+0.6
3,352,275	+				+0.2
3,352,275	+				+0.1
3,352,276	-				-1.1
3,352,276	-				+0.7
3,352,276	-				+0.6
3,352,276	-				+0.2
3,352,276	-				+0.4
3,352,276	-				+0.1
3,352,276	-				+0.5
3,352,276	-				-2.1
3,352,329	+				+0.3
3,352,329	+				-0.9
3,352,329	+				+2.3
3,352,329	+				-0.5
3,352,345	+				+1.7
3,352,345	+				+1.4
3,352,345	+				+0.5
3,352,345	+				-2.2
3,352,345	+				-0.3
3,352,346	-				-0.9
3,352,346	-				+0.0
3,352,346	-				+0.5
3,352,346	-				+0.6
3,352,397	+				+1.2
3,352,407	+				-0.8
3,352,407	+				-0.3
3,352,407	+				+0.1
3,352,408	-				+0.4
3,352,408	-				+0.2
3,352,408	-				-0.4
3,352,438	+				+0.1
3,352,438	+				-2.4
3,352,439	-				-1.3
3,352,439	-				-0.4
3,352,440	+				-0.5
3,352,440	+				-1.4
3,352,645	+				-1.4