Strain Fitness in Pantoea sp. MT58 around IAI47_13875

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,936,227	-				-0.9
2,936,227	-				-1.4
2,936,257	-				+2.6
2,936,265	-				-0.9
2,936,265	-				-2.3
2,936,265	-				-2.1
2,936,265	-				+0.1
2,936,265	-				+2.5
2,936,302	+				-1.2
2,936,302	+				+2.2
2,936,303	-				+0.4
2,936,303	-				+0.3
2,936,310	+				+0.6
2,936,310	+				-0.5
2,936,311	-				+0.1
2,936,379	+				+0.1
2,936,381	+				-0.3
2,936,420	+				-2.0
2,936,421	-				+0.0
2,936,421	-				+1.5
2,936,421	-				+0.9
2,936,449	+				-3.1
2,936,450	-				-0.8
2,936,591	-		IAI47_13875	0.11	+1.3
2,936,602	+		IAI47_13875	0.12	+2.3
2,936,602	+		IAI47_13875	0.12	+0.2
2,936,602	+		IAI47_13875	0.12	+0.9
2,936,603	-		IAI47_13875	0.12	+0.6
2,936,618	+		IAI47_13875	0.13	-1.9
2,936,677	+		IAI47_13875	0.15	+0.7
2,937,055	+		IAI47_13875	0.34	+0.1
2,937,055	+		IAI47_13875	0.34	-0.4
2,937,056	-		IAI47_13875	0.34	+0.0
2,937,073	+		IAI47_13875	0.35	+1.7
2,937,073	+		IAI47_13875	0.35	-2.5
2,937,073	+		IAI47_13875	0.35	-1.4
2,937,073	+		IAI47_13875	0.35	-1.8
2,937,074	-		IAI47_13875	0.35	-0.3
2,937,074	-		IAI47_13875	0.35	-0.3
2,937,074	-		IAI47_13875	0.35	+0.9
2,937,074	-		IAI47_13875	0.35	-0.7
2,937,074	-		IAI47_13875	0.35	-0.4
2,937,074	-		IAI47_13875	0.35	+0.8
2,937,092	+		IAI47_13875	0.36	+2.1
2,937,093	-		IAI47_13875	0.36	+1.3
2,937,093	-		IAI47_13875	0.36	-1.0
2,937,123	+		IAI47_13875	0.37	+0.7
2,937,170	-		IAI47_13875	0.40	-0.2
2,937,186	+		IAI47_13875	0.41	+0.1
2,937,187	-		IAI47_13875	0.41	+0.6
2,937,187	-		IAI47_13875	0.41	+0.6
2,937,187	-		IAI47_13875	0.41	+1.8
2,937,273	+		IAI47_13875	0.45	-1.3
2,937,273	+		IAI47_13875	0.45	+1.0
2,937,273	+		IAI47_13875	0.45	-1.3
2,937,273	+		IAI47_13875	0.45	+0.1
2,937,273	+		IAI47_13875	0.45	+1.1
2,937,273	+		IAI47_13875	0.45	-0.2
2,937,273	+		IAI47_13875	0.45	-0.9
2,937,273	+		IAI47_13875	0.45	-0.2
2,937,273	+		IAI47_13875	0.45	+2.7
2,937,274	-		IAI47_13875	0.45	+0.3
2,937,274	-		IAI47_13875	0.45	+0.3
2,937,274	-		IAI47_13875	0.45	+0.6
2,937,274	-		IAI47_13875	0.45	+0.5
2,937,274	-		IAI47_13875	0.45	+0.1
2,937,274	-		IAI47_13875	0.45	+0.2
2,937,274	-		IAI47_13875	0.45	-0.4
2,937,274	-		IAI47_13875	0.45	-0.5
2,937,274	-		IAI47_13875	0.45	+1.0
2,937,276	+		IAI47_13875	0.45	+0.3
2,937,276	+		IAI47_13875	0.45	-0.3
2,937,276	+		IAI47_13875	0.45	+0.7
2,937,276	+		IAI47_13875	0.45	+0.6
2,937,276	+		IAI47_13875	0.45	-1.3
2,937,276	+		IAI47_13875	0.45	+0.1
2,937,276	+		IAI47_13875	0.45	+0.8
2,937,276	+		IAI47_13875	0.45	+1.2
2,937,276	+		IAI47_13875	0.45	-0.1
2,937,276	+		IAI47_13875	0.45	-1.0
2,937,276	+		IAI47_13875	0.45	+0.8
2,937,276	+		IAI47_13875	0.45	+0.2
2,937,276	+		IAI47_13875	0.45	+3.0
2,937,276	+		IAI47_13875	0.45	-1.1
2,937,276	+		IAI47_13875	0.45	-0.5
2,937,277	-		IAI47_13875	0.45	+0.7
2,937,277	-		IAI47_13875	0.45	+0.0
2,937,277	-		IAI47_13875	0.45	+1.9
2,937,277	-		IAI47_13875	0.45	-0.3
2,937,277	-		IAI47_13875	0.45	+0.9
2,937,277	-		IAI47_13875	0.45	+0.2
2,937,277	-		IAI47_13875	0.45	+1.0
2,937,277	-		IAI47_13875	0.45	+0.8
2,937,277	-		IAI47_13875	0.45	-0.4
2,937,281	-		IAI47_13875	0.45	-1.7
2,937,281	-		IAI47_13875	0.45	-0.5
2,937,315	+		IAI47_13875	0.47	+0.5
2,937,315	+		IAI47_13875	0.47	+1.0
2,937,315	+		IAI47_13875	0.47	+0.0
2,937,315	+		IAI47_13875	0.47	+1.3
2,937,316	-		IAI47_13875	0.47	+2.6
2,937,316	-		IAI47_13875	0.47	-1.4
2,937,316	-		IAI47_13875	0.47	+2.5
2,937,316	-		IAI47_13875	0.47	+2.6
2,937,316	-		IAI47_13875	0.47	+0.5
2,937,337	+		IAI47_13875	0.48	-0.5
2,937,338	-		IAI47_13875	0.48	+0.1
2,937,338	-		IAI47_13875	0.48	+1.7
2,937,355	+		IAI47_13875	0.49	+1.3
2,937,356	-		IAI47_13875	0.49	+0.8
2,937,401	-		IAI47_13875	0.51	-2.6
2,937,401	-		IAI47_13875	0.51	+0.4
2,937,401	-		IAI47_13875	0.51	+0.1
2,937,401	-		IAI47_13875	0.51	-0.1
2,937,401	-		IAI47_13875	0.51	+0.4
2,937,401	-		IAI47_13875	0.51	-1.6
2,937,401	-		IAI47_13875	0.51	+0.7
2,937,402	-		IAI47_13875	0.51	+0.4
2,937,413	-		IAI47_13875	0.52	+0.6
2,937,450	+		IAI47_13875	0.54	-0.7
2,937,450	+				+1.8
2,937,451	-		IAI47_13875	0.54	+3.6
2,937,472	+		IAI47_13875	0.55	+1.2
2,937,472	+		IAI47_13875	0.55	+0.9
2,937,472	+		IAI47_13875	0.55	-0.7
2,937,472	+		IAI47_13875	0.55	-0.3
2,937,472	+		IAI47_13875	0.55	-1.3
2,937,472	+		IAI47_13875	0.55	-0.1
2,937,473	-		IAI47_13875	0.55	+0.5
2,937,473	-		IAI47_13875	0.55	+0.1
2,937,473	-		IAI47_13875	0.55	+0.0
2,937,473	-		IAI47_13875	0.55	+1.2
2,937,505	+		IAI47_13875	0.56	+1.5
2,937,505	+		IAI47_13875	0.56	+0.9
2,937,535	+		IAI47_13875	0.58	+0.9
2,937,535	+		IAI47_13875	0.58	+0.1
2,937,535	+		IAI47_13875	0.58	+0.2
2,937,535	+		IAI47_13875	0.58	-0.7
2,937,535	+		IAI47_13875	0.58	-2.1
2,937,535	+		IAI47_13875	0.58	+0.6
2,937,535	+		IAI47_13875	0.58	+1.1
2,937,535	+		IAI47_13875	0.58	+0.5
2,937,535	+		IAI47_13875	0.58	+1.0
2,937,536	-		IAI47_13875	0.58	-2.2
2,937,536	-		IAI47_13875	0.58	+0.2
2,937,536	-		IAI47_13875	0.58	+0.5
2,937,536	-		IAI47_13875	0.58	+0.5
2,937,536	-		IAI47_13875	0.58	+0.7
2,937,536	-		IAI47_13875	0.58	+0.6
2,937,536	-		IAI47_13875	0.58	-0.1
2,937,538	+		IAI47_13875	0.58	+0.3
2,937,538	+		IAI47_13875	0.58	-0.0
2,937,538	+		IAI47_13875	0.58	+0.6
2,937,538	+		IAI47_13875	0.58	+0.4
2,937,538	+		IAI47_13875	0.58	-0.2
2,937,538	+		IAI47_13875	0.58	+1.4
2,937,538	+		IAI47_13875	0.58	+1.1
2,937,538	+		IAI47_13875	0.58	+0.2
2,937,538	+		IAI47_13875	0.58	+0.1
2,937,539	-		IAI47_13875	0.58	+0.9
2,937,539	-		IAI47_13875	0.58	-0.1
2,937,539	-		IAI47_13875	0.58	+0.4
2,937,539	-		IAI47_13875	0.58	-0.2
2,937,539	-		IAI47_13875	0.58	+1.0
2,937,579	+		IAI47_13875	0.60	+0.5
2,937,579	+		IAI47_13875	0.60	+2.2
2,937,579	+		IAI47_13875	0.60	+0.3
2,937,579	+		IAI47_13875	0.60	+1.0
2,937,580	-		IAI47_13875	0.60	-1.1
2,937,580	-		IAI47_13875	0.60	+1.0
2,937,580	-		IAI47_13875	0.60	-0.6
2,937,580	-		IAI47_13875	0.60	-1.9
2,937,582	+		IAI47_13875	0.60	-1.1
2,937,583	+		IAI47_13875	0.60	-0.3
2,937,583	+		IAI47_13875	0.60	-0.4
2,937,584	-		IAI47_13875	0.60	+1.0
2,937,616	+		IAI47_13875	0.62	+2.4
2,937,617	-		IAI47_13875	0.62	-0.7
2,937,617	-		IAI47_13875	0.62	+1.6
2,937,617	-		IAI47_13875	0.62	+1.9
2,937,640	-		IAI47_13875	0.63	+1.6
2,937,657	-		IAI47_13875	0.64	+0.7
2,937,703	+		IAI47_13875	0.66	-2.6
2,937,704	-		IAI47_13875	0.66	+1.7
2,937,715	+		IAI47_13875	0.67	+2.4
2,937,715	+		IAI47_13875	0.67	+0.9
2,937,715	+		IAI47_13875	0.67	-1.7
2,937,715	+		IAI47_13875	0.67	-1.4
2,937,716	-		IAI47_13875	0.67	-0.5
2,937,716	-		IAI47_13875	0.67	-1.0
2,937,716	-		IAI47_13875	0.67	-0.8
2,937,718	+		IAI47_13875	0.67	+0.4
2,937,718	+		IAI47_13875	0.67	+1.9
2,937,718	+		IAI47_13875	0.67	-0.3
2,937,719	-		IAI47_13875	0.67	+0.1
2,937,719	-		IAI47_13875	0.67	-1.4
2,937,719	-		IAI47_13875	0.67	-0.1
2,937,798	+		IAI47_13875	0.71	+0.1
2,937,798	+		IAI47_13875	0.71	+0.1
2,937,798	+		IAI47_13875	0.71	-1.8
2,937,799	-		IAI47_13875	0.71	+1.4
2,937,799	-		IAI47_13875	0.71	+1.2
2,937,799	-		IAI47_13875	0.71	+4.3
2,937,799	-		IAI47_13875	0.71	-0.2
2,937,799	-		IAI47_13875	0.71	-2.6
2,937,799	-		IAI47_13875	0.71	-0.2
2,937,799	-		IAI47_13875	0.71	-0.9
2,937,799	-		IAI47_13875	0.71	+2.2
2,937,799	-		IAI47_13875	0.71	-1.1
2,937,879	+		IAI47_13875	0.75	-0.2
2,937,879	+		IAI47_13875	0.75	-0.3
2,937,879	+		IAI47_13875	0.75	+1.0
2,937,879	+		IAI47_13875	0.75	+0.6
2,937,879	+		IAI47_13875	0.75	+0.7
2,937,879	+		IAI47_13875	0.75	+0.0
2,937,879	+		IAI47_13875	0.75	-0.4
2,937,879	+		IAI47_13875	0.75	-0.3
2,937,879	+		IAI47_13875	0.75	+1.4
2,937,879	+		IAI47_13875	0.75	+0.1
2,937,879	+		IAI47_13875	0.75	+0.9
2,937,880	-		IAI47_13875	0.75	+0.5
2,937,880	-		IAI47_13875	0.75	-0.5
2,937,880	-		IAI47_13875	0.75	+1.3
2,937,880	-		IAI47_13875	0.75	+0.7
2,937,880	-		IAI47_13875	0.75	+2.1
2,937,880	-		IAI47_13875	0.75	+0.2
2,937,889	+		IAI47_13875	0.75	-0.3
2,937,992	-		IAI47_13875	0.80	-0.7
2,937,992	-		IAI47_13875	0.80	-0.1
2,937,993	+		IAI47_13875	0.80	+0.4
2,937,993	+		IAI47_13875	0.80	+1.1
2,937,993	+		IAI47_13875	0.80	+2.5
2,937,993	+		IAI47_13875	0.80	+1.2
2,937,993	+		IAI47_13875	0.80	-1.5
2,937,993	+		IAI47_13875	0.80	+0.7
2,937,993	+		IAI47_13875	0.80	+0.1
2,937,994	-		IAI47_13875	0.80	+3.3
2,937,994	-		IAI47_13875	0.80	-1.3
2,937,994	-		IAI47_13875	0.80	-0.2
2,937,994	-		IAI47_13875	0.80	+1.6
2,937,994	-		IAI47_13875	0.80	+0.0
2,937,994	-		IAI47_13875	0.80	+0.1
2,938,065	-		IAI47_13875	0.84	+2.7
2,938,065	-		IAI47_13875	0.84	-1.4
2,938,171	+		IAI47_13875	0.89	-0.1
2,938,172	-		IAI47_13875	0.89	+0.5
2,938,172	-		IAI47_13875	0.89	-0.9
2,938,253	+				+2.6
2,938,254	-				-0.7
2,938,254	-				+0.1
2,938,316	+				-0.1
2,938,316	+				-0.1
2,938,316	+				-1.6
2,938,316	+				-0.2
2,938,316	+				+2.5
2,938,317	-				+2.3
2,938,317	-				+3.6
2,938,317	-				+0.7
2,938,317	-				-0.5
2,938,317	-				+0.7
2,938,317	-				-0.2
2,938,317	-				-1.3
2,938,317	-				+0.9
2,938,317	-				+2.1
2,938,319	+				-0.2
2,938,319	+				-0.8
2,938,320	-				-0.5
2,938,320	-				-0.3
2,938,320	-				-1.3
2,938,320	-				+0.4
2,938,320	-				+2.2
2,938,320	-				+2.0
2,938,376	+				+0.3
2,938,376	+				+1.8
2,938,376	+				+1.0
2,938,376	+				-0.5
2,938,377	-				+0.5
2,938,380	+				-0.7
2,938,381	-				-0.4
2,938,381	-				+0.5
2,938,381	-				+2.5
2,938,385	+				+0.9
2,938,385	+				-0.3
2,938,385	+				-0.1
2,938,385	+				+2.9
2,938,385	+				+1.5
2,938,385	+				-0.5
2,938,385	+				+0.4
2,938,385	+				-1.4
2,938,385	+				-2.5
2,938,386	-				-0.7
2,938,386	-				-0.4
2,938,386	-				-1.6
2,938,386	-				+1.7
2,938,386	-				+1.5
2,938,390	+				-1.5
2,938,390	+				+0.4
2,938,390	+				+1.1
2,938,391	-				+0.4
2,938,391	-				+0.9
2,938,391	-				+0.1
2,938,391	-				+1.5
2,938,391	-				-1.3
2,938,391	-				-1.5
2,938,391	-				-0.4
2,938,403	+				+1.0
2,938,433	+				+0.9
2,938,433	+				+0.5
2,938,433	+				+0.6
2,938,433	+				+1.1
2,938,434	-				+1.1
2,938,434	-				-1.0
2,938,434	-				+1.4
2,938,434	-				-1.6
2,938,434	-				-0.1
2,938,434	-				-0.7
2,938,434	-				-0.4
2,938,463	+				-0.7
2,938,466	+				+1.0
2,938,466	+				-1.1
2,938,466	+				-0.8
2,938,466	+				-0.8
2,938,466	+				+0.8
2,938,467	-				+1.5
2,938,467	-				-0.5
2,938,467	-				-0.0
2,938,467	-				-0.1
2,938,467	-				+0.1
2,938,467	-				-0.5
2,938,475	+				+0.1
2,938,475	+				+1.3
2,938,476	-				-0.6
2,938,476	-				-1.1
2,938,492	+				+0.5
2,938,492	+				-0.3
2,938,492	+				+1.8
2,938,493	-				+0.5
2,938,493	-				+0.4
2,938,493	-				+2.1
2,938,493	-				+0.9
2,938,493	-				-0.3
2,938,493	-				-1.6
2,938,499	-				+0.5
2,938,644	+				+2.9
2,938,669	+				+0.5
2,938,669	+				+1.9
2,938,670	-				-2.4
2,938,682	+				+1.1
2,938,705	-				-1.4
2,938,735	-				+0.9
2,938,752	+				+0.4
2,938,774	+				+0.0
2,938,774	+				-0.5
2,938,774	+				+1.0
2,938,774	+				+0.8
2,938,774	+				-0.5
2,938,774	+				+1.1
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