Strain Fitness in Pantoea sp. MT58 around IAI47_13410

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,843,796	+				-3.0
2,843,796	+				+0.3
2,843,796	+				-0.3
2,843,796	+				-0.7
2,843,797	-				+0.0
2,843,799	-				+0.2
2,843,808	+				-0.5
2,843,809	-				-0.6
2,843,843	+				-0.2
2,843,843	+				+0.6
2,843,844	-				+0.7
2,843,844	-				-0.6
2,843,844	-				+0.3
2,843,848	-				-1.3
2,843,848	-				-0.7
2,843,891	+				-0.1
2,843,893	+				-1.5
2,843,894	-				-0.6
2,843,894	-				+1.7
2,843,894	-				+0.9
2,843,894	-				+0.9
2,843,894	-				-0.6
2,843,894	-				+0.6
2,843,894	-				-0.9
2,843,958	+				+2.3
2,843,959	-				-0.7
2,843,959	-				+2.7
2,843,962	+				+0.3
2,843,962	+				+1.4
2,843,962	+				+1.1
2,843,962	+				+1.0
2,843,963	-				+0.7
2,843,969	+				+0.6
2,843,969	+				+0.8
2,843,970	-				+1.4
2,843,975	+				+2.3
2,843,975	+				-1.0
2,843,990	-				-0.1
2,843,998	+		IAI47_13405	0.11	-0.1
2,843,998	+		IAI47_13405	0.11	+0.0
2,843,999	-		IAI47_13405	0.11	+0.8
2,843,999	-		IAI47_13405	0.11	-1.0
2,844,019	+		IAI47_13405	0.14	-0.1
2,844,019	+		IAI47_13405	0.14	-1.5
2,844,019	+		IAI47_13405	0.14	-0.3
2,844,020	-		IAI47_13405	0.14	-1.0
2,844,062	+		IAI47_13405	0.22	+0.7
2,844,062	+		IAI47_13405	0.22	-1.0
2,844,119	+		IAI47_13405	0.31	-0.2
2,844,179	-		IAI47_13405	0.42	+1.5
2,844,228	+		IAI47_13405	0.50	-0.0
2,844,228	+		IAI47_13405	0.50	-0.5
2,844,228	+		IAI47_13405	0.50	+1.3
2,844,228	+		IAI47_13405	0.50	-2.0
2,844,229	-		IAI47_13405	0.50	-1.4
2,844,244	+		IAI47_13405	0.53	-0.7
2,844,245	-		IAI47_13405	0.53	+1.0
2,844,245	-		IAI47_13405	0.53	-0.4
2,844,245	-		IAI47_13405	0.53	+0.2
2,844,245	-		IAI47_13405	0.53	+0.1
2,844,248	+		IAI47_13405	0.54	+0.8
2,844,248	+		IAI47_13405	0.54	+2.1
2,844,249	-		IAI47_13405	0.54	-0.4
2,844,249	-		IAI47_13405	0.54	-1.1
2,844,249	-		IAI47_13405	0.54	+0.2
2,844,249	-		IAI47_13405	0.54	-1.5
2,844,249	-		IAI47_13405	0.54	+1.2
2,844,249	-		IAI47_13405	0.54	+0.9
2,844,249	-		IAI47_13405	0.54	-2.3
2,844,274	+		IAI47_13405	0.58	-0.1
2,844,274	+		IAI47_13405	0.58	+0.4
2,844,274	+		IAI47_13405	0.58	+1.6
2,844,275	-		IAI47_13405	0.58	+2.6
2,844,275	-		IAI47_13405	0.58	-0.9
2,844,275	-		IAI47_13405	0.58	+0.0
2,844,319	+		IAI47_13405	0.66	+0.3
2,844,320	-		IAI47_13405	0.66	-2.1
2,844,515	+				+1.7
2,844,515	+				+0.1
2,844,516	-				-0.2
2,844,516	-				+0.0
2,844,524	+				-0.1
2,844,524	+				-0.2
2,844,673	+				-0.5
2,844,673	+				-0.5
2,844,673	+				+2.2
2,844,673	+				+0.1
2,844,673	+				-1.1
2,844,673	+				-0.7
2,844,673	+				+0.8
2,844,674	-				+0.5
2,844,674	-				-1.7
2,844,674	-				+0.0
2,844,674	-				-0.3
2,844,711	+				-0.6
2,844,711	+				+0.6
2,844,711	+				+0.3
2,844,712	-				+2.7
2,844,712	-				+0.7
2,844,720	+				+2.7
2,844,720	+				-0.9
2,844,720	+				+0.4
2,844,720	+				-0.1
2,844,720	+				-2.3
2,844,720	+				-2.8
2,844,720	+				-0.1
2,844,720	+				+0.8
2,844,721	-				+0.4
2,844,721	-				+0.1
2,844,721	-				+0.3
2,844,721	-				-0.6
2,844,721	-				+0.4
2,844,722	+				+1.4
2,844,722	+				-1.1
2,844,722	+				-1.7
2,844,722	+				+0.9
2,844,722	+				+0.3
2,844,722	+				-1.5
2,844,722	+				+0.2
2,844,722	+				+0.1
2,844,722	+				-0.8
2,844,722	+				-0.4
2,844,723	-				+0.9
2,844,723	-				+1.2
2,844,723	-				+0.2
2,844,723	-				+0.3
2,844,723	-				-0.1
2,844,726	+				-0.9
2,844,726	+				-0.3
2,844,726	+				-1.7
2,844,726	+				-0.2
2,844,726	+				+0.2
2,844,726	+				-0.1
2,844,727	-				+0.4
2,844,727	-				+1.7
2,844,727	-				+0.1
2,844,727	-				+0.1
2,844,759	+				-0.6
2,844,759	+				-2.5
2,844,759	+				+1.4
2,844,760	-				-1.9
2,844,764	+				-0.4
2,844,764	+				-0.5
2,844,764	+				+1.4
2,844,765	-				+0.9
2,844,771	+				-0.6
2,844,772	-				+2.5
2,844,844	+				+0.9
2,844,845	-				-2.2
2,844,845	-				+1.9
2,844,961	+		IAI47_13410	0.11	-2.1
2,844,962	-		IAI47_13410	0.11	-1.1
2,845,030	+		IAI47_13410	0.15	-0.6
2,845,030	+		IAI47_13410	0.15	-2.0
2,845,030	+		IAI47_13410	0.15	+2.3
2,845,030	+		IAI47_13410	0.15	+0.0
2,845,030	+		IAI47_13410	0.15	-0.4
2,845,031	-		IAI47_13410	0.15	+1.7
2,845,031	-		IAI47_13410	0.15	+1.2
2,845,056	+		IAI47_13410	0.17	+0.9
2,845,056	+		IAI47_13410	0.17	+0.2
2,845,057	-		IAI47_13410	0.17	-0.5
2,845,057	-		IAI47_13410	0.17	-0.8
2,845,138	+		IAI47_13410	0.21	+0.2
2,845,138	+		IAI47_13410	0.21	-0.5
2,845,138	+		IAI47_13410	0.21	-1.7
2,845,139	-		IAI47_13410	0.21	+0.0
2,845,139	-		IAI47_13410	0.21	-0.9
2,845,139	-		IAI47_13410	0.21	-2.3
2,845,171	-		IAI47_13410	0.23	+0.3
2,845,275	-		IAI47_13410	0.29	+2.1
2,845,289	-		IAI47_13410	0.29	-0.1
2,845,326	+		IAI47_13410	0.32	+0.3
2,845,372	+		IAI47_13410	0.34	+3.3
2,845,372	+		IAI47_13410	0.34	+1.0
2,845,373	-		IAI47_13410	0.34	-0.5
2,845,402	+		IAI47_13410	0.36	-0.7
2,845,402	+		IAI47_13410	0.36	+1.8
2,845,402	+		IAI47_13410	0.36	+0.5
2,845,402	+		IAI47_13410	0.36	+1.2
2,845,402	+		IAI47_13410	0.36	+1.3
2,845,402	+		IAI47_13410	0.36	+0.6
2,845,402	+		IAI47_13410	0.36	+0.5
2,845,402	+		IAI47_13410	0.36	-0.1
2,845,403	-		IAI47_13410	0.36	-1.0
2,845,403	-		IAI47_13410	0.36	+0.3
2,845,403	-		IAI47_13410	0.36	-1.1
2,845,403	-		IAI47_13410	0.36	+0.6
2,845,403	-		IAI47_13410	0.36	+0.7
2,845,465	+		IAI47_13410	0.39	-0.5
2,845,465	+		IAI47_13410	0.39	+1.0
2,845,466	-		IAI47_13410	0.39	+1.4
2,845,579	+		IAI47_13410	0.45	-0.7
2,845,579	+		IAI47_13410	0.45	+0.6
2,845,579	+		IAI47_13410	0.45	+0.9
2,845,579	+		IAI47_13410	0.45	+0.7
2,845,579	+		IAI47_13410	0.45	-0.9
2,845,579	+		IAI47_13410	0.45	+0.6
2,845,579	+		IAI47_13410	0.45	-2.7
2,845,579	+		IAI47_13410	0.45	+0.0
2,845,579	+		IAI47_13410	0.45	-2.2
2,845,580	-		IAI47_13410	0.46	+1.4
2,845,580	-		IAI47_13410	0.46	+1.1
2,845,580	-		IAI47_13410	0.46	+2.9
2,845,580	-		IAI47_13410	0.46	-0.4
2,845,580	-		IAI47_13410	0.46	-1.6
2,845,580	-		IAI47_13410	0.46	+0.1
2,845,580	-		IAI47_13410	0.46	-0.3
2,845,580	-		IAI47_13410	0.46	+0.4
2,845,600	+		IAI47_13410	0.47	-1.1
2,845,600	+		IAI47_13410	0.47	+0.6
2,845,600	+		IAI47_13410	0.47	-0.6
2,845,600	+		IAI47_13410	0.47	+2.7
2,845,600	+		IAI47_13410	0.47	+0.9
2,845,601	-		IAI47_13410	0.47	-0.5
2,845,601	-		IAI47_13410	0.47	+1.2
2,845,601	-		IAI47_13410	0.47	+0.5
2,845,602	+		IAI47_13410	0.47	+1.9
2,845,603	-		IAI47_13410	0.47	+0.2
2,845,614	+		IAI47_13410	0.47	-2.1
2,845,615	-		IAI47_13410	0.47	+0.2
2,845,615	-		IAI47_13410	0.47	-0.0
2,845,615	-		IAI47_13410	0.47	+0.8
2,845,623	+		IAI47_13410	0.48	+0.4
2,845,623	+		IAI47_13410	0.48	+0.5
2,845,624	-		IAI47_13410	0.48	+1.6
2,845,687	+		IAI47_13410	0.51	+0.4
2,845,687	+		IAI47_13410	0.51	-0.9
2,845,687	+		IAI47_13410	0.51	-1.3
2,845,688	-		IAI47_13410	0.51	-0.9
2,845,688	-		IAI47_13410	0.51	+0.8
2,845,688	-		IAI47_13410	0.51	-1.3
2,845,745	-		IAI47_13410	0.55	-0.0
2,845,745	-		IAI47_13410	0.55	-2.3
2,845,803	+		IAI47_13410	0.58	+0.1
2,845,803	+		IAI47_13410	0.58	+0.9
2,845,803	+		IAI47_13410	0.58	+1.2
2,845,803	+		IAI47_13410	0.58	+0.4
2,845,804	-		IAI47_13410	0.58	+0.4
2,845,804	-		IAI47_13410	0.58	+0.4
2,845,807	+		IAI47_13410	0.58	+0.8
2,845,807	+		IAI47_13410	0.58	-0.3
2,845,807	+		IAI47_13410	0.58	+3.8
2,845,808	-		IAI47_13410	0.58	-1.3
2,845,808	-		IAI47_13410	0.58	+2.7
2,845,831	+		IAI47_13410	0.59	+0.9
2,845,831	+		IAI47_13410	0.59	+0.4
2,845,832	-		IAI47_13410	0.59	+0.9
2,845,832	-		IAI47_13410	0.59	-1.1
2,845,832	-		IAI47_13410	0.59	-0.2
2,845,832	-		IAI47_13410	0.59	+0.0
2,845,846	+		IAI47_13410	0.60	+2.2
2,845,847	-		IAI47_13410	0.60	+0.5
2,845,847	-		IAI47_13410	0.60	+3.6
2,845,935	+		IAI47_13410	0.65	+1.1
2,846,047	+		IAI47_13410	0.71	+2.6
2,846,047	+		IAI47_13410	0.71	+0.6
2,846,048	-		IAI47_13410	0.71	+1.7
2,846,088	+		IAI47_13410	0.73	+0.2
2,846,088	+		IAI47_13410	0.73	-0.7
2,846,089	-		IAI47_13410	0.74	+0.4
2,846,089	-		IAI47_13410	0.74	+0.7
2,846,149	+		IAI47_13410	0.77	-2.3
2,846,150	-		IAI47_13410	0.77	-1.1
2,846,150	-		IAI47_13410	0.77	+0.2
2,846,150	-		IAI47_13410	0.77	-1.6
2,846,259	+		IAI47_13410	0.83	-0.1
2,846,259	+		IAI47_13410	0.83	-0.7
2,846,259	+		IAI47_13410	0.83	-0.7
2,846,259	+		IAI47_13410	0.83	+0.0
2,846,259	+		IAI47_13410	0.83	+0.0
2,846,259	+		IAI47_13410	0.83	+1.3
2,846,260	-		IAI47_13410	0.83	+1.7
2,846,260	-		IAI47_13410	0.83	+0.1
2,846,260	-		IAI47_13410	0.83	-1.3
2,846,260	-		IAI47_13410	0.83	+0.9
2,846,260	-		IAI47_13410	0.83	+0.5
2,846,260	-		IAI47_13410	0.83	-0.4
2,846,260	-		IAI47_13410	0.83	+0.0
2,846,272	+		IAI47_13410	0.84	+5.5
2,846,273	-		IAI47_13410	0.84	+0.4
2,846,277	+		IAI47_13410	0.84	-0.9
2,846,277	+		IAI47_13410	0.84	-1.5
2,846,278	-		IAI47_13410	0.84	-0.2
2,846,278	-		IAI47_13410	0.84	+0.7
2,846,278	-		IAI47_13410	0.84	-0.2
2,846,278	-		IAI47_13410	0.84	-1.7
2,846,304	+		IAI47_13410	0.85	-0.4
2,846,305	-		IAI47_13410	0.85	-0.5
2,846,305	-		IAI47_13410	0.85	-0.4
2,846,305	-		IAI47_13410	0.85	-2.1
2,846,344	+		IAI47_13410	0.88	-2.4
2,846,344	+		IAI47_13410	0.88	-0.3
2,846,345	-		IAI47_13410	0.88	+1.4
2,846,413	+				-0.1
2,846,414	-				-1.3
2,846,414	-				+0.9
2,846,434	+				+0.7
2,846,434	+				+0.2
2,846,475	+				+1.0
2,846,475	+				+0.0
2,846,475	+				+0.2
2,846,475	+				-2.5
2,846,475	+				+1.4
2,846,475	+				+2.0
2,846,476	-				+1.2
2,846,643	-				+0.4
2,846,647	-				-0.4
2,846,652	-				-1.2
2,846,666	-				+1.4
2,846,691	+				+2.9
2,846,692	-				+1.4
2,846,700	+				-1.6
2,846,700	+				+0.1
2,846,700	+				-0.3
2,846,700	+				+0.8
2,846,700	+				+1.4
2,846,700	+				+0.6
2,846,700	+				+0.9
2,846,700	+				+3.3
2,846,700	+				-0.3
2,846,701	-				-1.6
2,846,701	-				-0.2
2,846,701	-				-0.3
2,846,701	-				-1.0
2,846,701	-				+1.6
2,846,701	-				-0.6
2,846,701	-				+2.2
2,846,701	-				-1.1
2,846,701	-				+0.6
2,846,702	+				-0.6
2,846,702	+				-1.8
2,846,702	+				+1.4
2,846,702	+				-0.5
2,846,702	+				-1.4
2,846,702	+				-0.4
2,846,703	-				+0.7
2,846,703	-				+0.8
2,846,703	-				-0.1
2,846,703	-				-0.5
2,846,767	+				+0.5
2,846,858	+				+0.3
2,846,859	-				-0.2
2,846,908	+		IAI47_13415	0.11	-0.1
2,846,908	+		IAI47_13415	0.11	+2.2
2,846,909	-		IAI47_13415	0.11	+0.4
2,846,909	-		IAI47_13415	0.11	+1.1
2,846,957	+		IAI47_13415	0.15	-2.6
2,846,977	+		IAI47_13415	0.17	-0.6
2,846,978	-		IAI47_13415	0.17	-1.3
2,846,978	-		IAI47_13415	0.17	+0.6
2,846,978	-		IAI47_13415	0.17	-0.6
2,847,008	+		IAI47_13415	0.20	+0.3
2,847,008	+		IAI47_13415	0.20	+1.7
2,847,008	+		IAI47_13415	0.20	+1.0
2,847,009	-		IAI47_13415	0.20	-0.0
2,847,009	-		IAI47_13415	0.20	-1.2
2,847,088	+		IAI47_13415	0.27	-0.7
2,847,089	-		IAI47_13415	0.27	-0.8
2,847,111	-		IAI47_13415	0.29	+0.0
2,847,111	-		IAI47_13415	0.29	-1.5
2,847,111	-		IAI47_13415	0.29	-0.1
2,847,114	-		IAI47_13415	0.29	+0.6
2,847,114	-		IAI47_13415	0.29	+0.3
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