Strain Fitness in Pantoea sp. MT58 around IAI47_13055

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,758,741	+				-1.5
2,758,741	+				+0.4
2,758,741	+				+1.1
2,758,742	-				+0.7
2,758,779	+				+0.7
2,758,807	+				-0.3
2,758,807	+				+0.3
2,758,807	+				+1.3
2,758,808	-				-0.5
2,758,808	-				+0.1
2,758,808	-				+2.8
2,758,808	-				-1.4
2,758,808	-				+0.8
2,758,808	-				+0.6
2,758,876	-				+0.4
2,758,890	+				-0.5
2,758,906	+				+0.1
2,758,968	+				+1.8
2,758,969	-				-0.7
2,758,969	-				-0.1
2,758,969	-				+1.0
2,758,983	+				+2.9
2,759,008	+				+0.7
2,759,008	+				-0.5
2,759,009	-				+2.1
2,759,009	-				+1.4
2,759,019	-				-0.5
2,759,019	-				+0.1
2,759,023	+				+0.3
2,759,024	-				+0.2
2,759,046	+				+0.8
2,759,046	+				+0.8
2,759,047	-				-0.6
2,759,060	+				+0.8
2,759,060	+				+0.8
2,759,061	-				+0.1
2,759,061	-				-0.5
2,759,061	-				-0.9
2,759,061	-				+0.8
2,759,061	-				-1.5
2,759,061	-				-1.8
2,759,070	+				-0.6
2,759,143	+				+2.1
2,759,143	+				+0.6
2,759,143	+				-1.0
2,759,143	+				-2.0
2,759,144	-				+1.1
2,759,165	+				+0.9
2,759,166	-				-1.8
2,759,286	+		IAI47_13050	0.25	-1.7
2,759,286	+		IAI47_13050	0.25	-0.8
2,759,287	-		IAI47_13050	0.26	-1.1
2,759,312	-		IAI47_13050	0.31	-0.7
2,759,361	+		IAI47_13050	0.41	+0.1
2,759,362	-		IAI47_13050	0.41	-0.6
2,759,362	-		IAI47_13050	0.41	-0.4
2,759,379	+		IAI47_13050	0.45	-0.2
2,759,380	-		IAI47_13050	0.45	-1.8
2,759,380	-		IAI47_13050	0.45	-1.2
2,759,583	+		IAI47_13050	0.87	-2.2
2,759,583	+		IAI47_13050	0.87	-1.9
2,759,584	-		IAI47_13050	0.88	-1.7
2,759,646	+				-0.9
2,759,646	+				+1.4
2,759,646	+				+0.1
2,759,647	-				-2.7
2,759,647	-				-1.2
2,759,666	-				+1.4
2,759,678	+				-0.9
2,759,679	-				+0.6
2,759,679	-				+0.8
2,759,679	-				+0.1
2,759,679	-				-2.0
2,759,679	-				-2.0
2,759,679	-				-0.2
2,759,684	-				-0.9
2,759,746	-				+0.5
2,759,806	-				+3.7
2,759,806	-				+1.2
2,759,806	-				+0.4
2,759,851	-		IAI47_13055	0.13	+0.1
2,759,889	+		IAI47_13055	0.17	-0.7
2,759,890	-		IAI47_13055	0.18	+0.8
2,759,972	+		IAI47_13055	0.27	-0.3
2,759,973	-		IAI47_13055	0.27	+1.1
2,760,094	-		IAI47_13055	0.40	-0.7
2,760,096	+		IAI47_13055	0.40	+1.1
2,760,096	+		IAI47_13055	0.40	+1.2
2,760,096	+		IAI47_13055	0.40	+0.3
2,760,096	+		IAI47_13055	0.40	-0.6
2,760,097	-		IAI47_13055	0.41	+0.2
2,760,114	+		IAI47_13055	0.42	+1.3
2,760,114	+		IAI47_13055	0.42	+0.7
2,760,115	-		IAI47_13055	0.43	+1.6
2,760,115	-		IAI47_13055	0.43	+1.1
2,760,144	+		IAI47_13055	0.46	+0.0
2,760,144	+		IAI47_13055	0.46	-0.7
2,760,144	+		IAI47_13055	0.46	-0.6
2,760,144	+		IAI47_13055	0.46	+1.0
2,760,144	+		IAI47_13055	0.46	+0.4
2,760,145	-		IAI47_13055	0.46	-0.2
2,760,145	-		IAI47_13055	0.46	+1.3
2,760,145	-		IAI47_13055	0.46	+0.1
2,760,145	-		IAI47_13055	0.46	-0.2
2,760,145	-		IAI47_13055	0.46	+0.1
2,760,145	-		IAI47_13055	0.46	+1.7
2,760,205	+		IAI47_13055	0.52	-0.7
2,760,206	-		IAI47_13055	0.53	+0.6
2,760,258	+		IAI47_13055	0.58	-0.9
2,760,259	-		IAI47_13055	0.58	-1.5
2,760,259	-		IAI47_13055	0.58	+0.7
2,760,378	-		IAI47_13055	0.72	-0.6
2,760,512	-				-0.4
2,760,513	+		IAI47_13055	0.87	-0.6
2,760,513	+		IAI47_13055	0.87	-0.9
2,760,513	+		IAI47_13055	0.87	+1.1
2,760,513	+		IAI47_13055	0.87	-1.8
2,760,514	-		IAI47_13055	0.87	-0.2
2,760,514	-		IAI47_13055	0.87	-2.4
2,760,514	-		IAI47_13055	0.87	+3.8
2,760,519	+		IAI47_13055	0.87	+1.6
2,760,519	+		IAI47_13055	0.87	-0.2
2,760,519	+		IAI47_13055	0.87	+0.4
2,760,519	+		IAI47_13055	0.87	-0.4
2,760,519	+		IAI47_13055	0.87	+0.3
2,760,519	+		IAI47_13055	0.87	+0.2
2,760,519	+		IAI47_13055	0.87	-1.3
2,760,519	+		IAI47_13055	0.87	-1.0
2,760,519	+		IAI47_13055	0.87	-0.9
2,760,519	+		IAI47_13055	0.87	-0.7
2,760,520	-		IAI47_13055	0.87	-2.4
2,760,520	-		IAI47_13055	0.87	-0.0
2,760,520	-		IAI47_13055	0.87	+1.4
2,760,520	-		IAI47_13055	0.87	-0.3
2,760,520	-		IAI47_13055	0.87	-0.7
2,760,520	-		IAI47_13055	0.87	-1.6
2,760,520	-		IAI47_13055	0.87	+0.1
2,760,520	-		IAI47_13055	0.87	-0.3
2,760,520	-		IAI47_13055	0.87	+2.0
2,760,520	-		IAI47_13055	0.87	+2.7
2,760,520	-		IAI47_13055	0.87	-0.3
2,760,520	-		IAI47_13055	0.87	-0.3
2,760,520	-		IAI47_13055	0.87	-0.4
2,760,520	-		IAI47_13055	0.87	-0.3
2,760,520	-		IAI47_13055	0.87	+1.0
2,760,520	-		IAI47_13055	0.87	+0.2
2,760,521	+		IAI47_13055	0.87	-0.4
2,760,521	+		IAI47_13055	0.87	-1.3
2,760,521	+		IAI47_13055	0.87	-0.3
2,760,521	+		IAI47_13055	0.87	+0.7
2,760,521	+		IAI47_13055	0.87	+0.2
2,760,521	+		IAI47_13055	0.87	+1.6
2,760,521	+		IAI47_13055	0.87	-0.3
2,760,521	+		IAI47_13055	0.87	+0.0
2,760,522	-		IAI47_13055	0.88	-0.0
2,760,522	-		IAI47_13055	0.88	+1.2
2,760,547	+				-1.4
2,760,597	-				+0.6
2,760,597	-				+0.4
2,760,625	+				-1.6
2,760,625	+				+0.2
2,760,625	+				-0.7
2,760,626	-				-0.2
2,760,630	-				-0.5
2,760,656	-				+0.2
2,760,685	+				-0.9
2,760,685	+				+1.0
2,760,686	-				-2.2
2,760,686	-				-0.4
2,760,695	+				+1.8
2,760,713	+				-0.7
2,760,714	-				+0.4
2,760,714	-				-0.9
2,760,732	+		IAI47_13060	0.11	-0.2
2,760,733	-		IAI47_13060	0.11	-1.3
2,760,733	-		IAI47_13060	0.11	-1.0
2,760,733	-		IAI47_13060	0.11	-1.4
2,760,752	+		IAI47_13060	0.14	-0.7
2,760,753	-		IAI47_13060	0.14	+0.1
2,760,762	-		IAI47_13060	0.15	-0.9
2,760,779	-		IAI47_13060	0.17	+1.4
2,760,779	-		IAI47_13060	0.17	+0.6
2,760,779	-		IAI47_13060	0.17	+2.0
2,760,781	+		IAI47_13060	0.18	+0.5
2,760,781	+		IAI47_13060	0.18	-0.5
2,760,781	+		IAI47_13060	0.18	-1.0
2,760,781	+		IAI47_13060	0.18	+0.2
2,760,781	+		IAI47_13060	0.18	+0.1
2,760,781	+		IAI47_13060	0.18	-0.4
2,760,782	-		IAI47_13060	0.18	+0.0
2,760,782	-		IAI47_13060	0.18	+1.0
2,760,782	-		IAI47_13060	0.18	-0.1
2,760,782	-		IAI47_13060	0.18	-0.4
2,760,782	-		IAI47_13060	0.18	+0.3
2,760,782	-		IAI47_13060	0.18	-2.7
2,760,802	+		IAI47_13060	0.20	-0.4
2,760,802	+		IAI47_13060	0.20	+0.4
2,760,802	+		IAI47_13060	0.20	+0.2
2,760,802	+		IAI47_13060	0.20	+0.9
2,760,802	+		IAI47_13060	0.20	-0.9
2,760,803	-		IAI47_13060	0.21	+0.5
2,760,803	-		IAI47_13060	0.21	-0.8
2,760,836	-		IAI47_13060	0.25	-0.2
2,760,849	+		IAI47_13060	0.27	-1.0
2,760,849	+		IAI47_13060	0.27	-0.5
2,760,850	-		IAI47_13060	0.27	+1.2
2,760,869	+		IAI47_13060	0.30	+1.6
2,760,870	-		IAI47_13060	0.30	+0.8
2,760,870	-		IAI47_13060	0.30	+2.7
2,760,977	+		IAI47_13060	0.45	-1.3
2,760,992	+		IAI47_13060	0.47	-0.3
2,761,232	+		IAI47_13060	0.80	-1.3
2,761,233	-		IAI47_13060	0.80	+0.1
2,761,235	+		IAI47_13060	0.80	-1.0
2,761,235	+		IAI47_13060	0.80	-0.3
2,761,235	+		IAI47_13060	0.80	-0.8
2,761,236	-		IAI47_13060	0.80	-1.2
2,761,236	-		IAI47_13060	0.80	+0.0
2,761,248	+		IAI47_13060	0.82	-0.2
2,761,248	+		IAI47_13060	0.82	-2.5
2,761,249	-		IAI47_13060	0.82	+0.8
2,761,249	-		IAI47_13060	0.82	-1.2
2,761,283	+		IAI47_13060	0.87	+1.0
2,761,284	-		IAI47_13060	0.87	+0.6
2,761,326	-				-1.3
2,761,326	-				-2.1
2,761,356	+				+1.6
2,761,356	+				-1.1
2,761,357	-				-0.7
2,761,357	-				+0.3
2,761,376	+				-0.5
2,761,377	-				-0.8
2,761,394	+				-0.4
2,761,395	-				+2.4
2,761,456	+		IAI47_13065	0.25	+1.7
2,761,456	+		IAI47_13065	0.25	+1.0
2,761,456	+		IAI47_13065	0.25	-2.9
2,761,457	-		IAI47_13065	0.25	-1.0
2,761,633	+				+1.3
2,761,633	+				+0.3