Strain Fitness in Pantoea sp. MT58 around IAI47_13045

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,756,770	+		IAI47_13040	0.31	+2.2
2,756,770	+		IAI47_13040	0.31	-2.0
2,756,770	+		IAI47_13040	0.31	+1.5
2,756,834	+		IAI47_13040	0.37	+1.4
2,756,834	+		IAI47_13040	0.37	+0.3
2,756,834	+		IAI47_13040	0.37	+0.8
2,756,834	+		IAI47_13040	0.37	-2.2
2,756,834	+		IAI47_13040	0.37	+0.8
2,756,834	+		IAI47_13040	0.37	-0.7
2,756,834	+		IAI47_13040	0.37	+0.9
2,756,834	+		IAI47_13040	0.37	-0.7
2,756,834	+		IAI47_13040	0.37	+1.4
2,756,834	+		IAI47_13040	0.37	+0.8
2,756,834	+		IAI47_13040	0.37	+0.6
2,756,834	+		IAI47_13040	0.37	-2.6
2,756,834	+		IAI47_13040	0.37	-0.4
2,756,835	-		IAI47_13040	0.37	+0.5
2,756,835	-		IAI47_13040	0.37	-1.8
2,756,835	-		IAI47_13040	0.37	+0.2
2,756,835	-		IAI47_13040	0.37	+0.4
2,756,835	-		IAI47_13040	0.37	+1.9
2,756,835	-		IAI47_13040	0.37	+0.7
2,756,835	-		IAI47_13040	0.37	-2.8
2,756,835	-		IAI47_13040	0.37	+0.4
2,756,835	-		IAI47_13040	0.37	+0.2
2,756,835	-		IAI47_13040	0.37	-0.3
2,756,880	+		IAI47_13040	0.41	-3.8
2,756,881	-		IAI47_13040	0.41	-0.3
2,756,965	-		IAI47_13040	0.49	+0.3
2,756,965	-		IAI47_13040	0.49	+0.4
2,757,169	+		IAI47_13040	0.67	+0.6
2,757,169	+		IAI47_13040	0.67	+1.3
2,757,169	+		IAI47_13040	0.67	-1.9
2,757,170	-		IAI47_13040	0.67	+1.2
2,757,213	+		IAI47_13040	0.71	-0.6
2,757,241	+		IAI47_13040	0.73	+0.1
2,757,241	+		IAI47_13040	0.73	-0.9
2,757,242	-		IAI47_13040	0.73	+0.1
2,757,248	+		IAI47_13040	0.74	-1.2
2,757,249	-		IAI47_13040	0.74	-0.6
2,757,267	+		IAI47_13040	0.75	+0.7
2,757,268	-		IAI47_13040	0.75	+0.8
2,757,268	-		IAI47_13040	0.75	+0.6
2,757,282	-		IAI47_13040	0.77	+0.3
2,757,417	+		IAI47_13040	0.89	+0.2
2,757,417	+		IAI47_13040	0.89	+3.6
2,757,417	+		IAI47_13040	0.89	-2.0
2,757,418	-		IAI47_13040	0.89	-1.9
2,757,418	-		IAI47_13040	0.89	+0.6
2,757,419	+		IAI47_13040	0.89	+0.5
2,757,419	+		IAI47_13040	0.89	+0.0
2,757,419	+		IAI47_13040	0.89	+1.0
2,757,419	+		IAI47_13040	0.89	+1.8
2,757,419	+		IAI47_13040	0.89	+0.1
2,757,419	+		IAI47_13040	0.89	+1.1
2,757,419	+		IAI47_13040	0.89	-1.4
2,757,419	+		IAI47_13040	0.89	-0.5
2,757,419	+		IAI47_13040	0.89	-1.0
2,757,419	+		IAI47_13040	0.89	+1.5
2,757,419	+		IAI47_13040	0.89	+0.3
2,757,420	-		IAI47_13040	0.89	-1.7
2,757,420	-		IAI47_13040	0.89	+1.4
2,757,420	-		IAI47_13040	0.89	-0.9
2,757,420	-		IAI47_13040	0.89	+0.4
2,757,420	-		IAI47_13040	0.89	-0.2
2,757,420	-		IAI47_13040	0.89	+0.1
2,757,420	-		IAI47_13040	0.89	-1.4
2,757,420	-		IAI47_13040	0.89	-0.7
2,757,420	-		IAI47_13040	0.89	+0.5
2,757,420	-		IAI47_13040	0.89	-0.5
2,757,420	-		IAI47_13040	0.89	-0.0
2,757,420	-		IAI47_13040	0.89	-0.5
2,757,420	-		IAI47_13040	0.89	-0.3
2,757,423	+		IAI47_13040	0.89	+0.1
2,757,423	+		IAI47_13040	0.89	+0.3
2,757,423	+		IAI47_13040	0.89	-0.7
2,757,423	+		IAI47_13040	0.89	-0.3
2,757,423	+		IAI47_13040	0.89	-0.7
2,757,423	+		IAI47_13040	0.89	+2.0
2,757,424	-		IAI47_13040	0.89	-1.7
2,757,424	-		IAI47_13040	0.89	+0.8
2,757,424	-		IAI47_13040	0.89	-1.7
2,757,424	-		IAI47_13040	0.89	+0.4
2,757,516	+				-1.3
2,757,516	+				+0.4
2,757,517	-				+0.3
2,757,671	+				+2.1
2,757,671	+				+1.7
2,757,671	+				-0.4
2,757,671	+				-0.2
2,757,671	+				-0.6
2,757,672	-				-0.2
2,757,672	-				-0.2
2,757,672	-				+0.8
2,757,672	-				-0.9
2,757,672	-				+0.7
2,757,675	+				+0.7
2,757,675	+				+2.0
2,757,675	+				+0.6
2,757,675	+				+1.5
2,757,675	+				+1.1
2,757,675	+				+0.3
2,757,676	-				+0.8
2,757,676	-				+0.6
2,757,676	-				-0.9
2,757,676	-				-0.3
2,757,685	+				-0.8
2,757,690	+				+0.8
2,757,690	+				-1.0
2,757,690	+				-1.3
2,757,690	+				-0.4
2,757,691	-				-0.9
2,757,705	+				+0.1
2,757,705	+				-1.0
2,757,706	-				-0.2
2,757,706	-				+0.6
2,757,706	-				+0.5
2,757,780	+				+0.8
2,757,780	+				-0.6
2,757,780	+				+1.0
2,757,781	-		IAI47_13045	0.10	+0.8
2,757,781	-		IAI47_13045	0.10	+1.9
2,757,781	-		IAI47_13045	0.10	+2.1
2,757,781	-		IAI47_13045	0.10	+0.6
2,757,781	-		IAI47_13045	0.10	+0.5
2,757,781	-		IAI47_13045	0.10	+0.7
2,757,793	-		IAI47_13045	0.11	-0.5
2,757,842	+		IAI47_13045	0.15	+2.0
2,757,842	+		IAI47_13045	0.15	-0.5
2,757,842	+		IAI47_13045	0.15	+0.3
2,757,842	+		IAI47_13045	0.15	+0.3
2,757,843	-		IAI47_13045	0.16	+0.4
2,757,843	-		IAI47_13045	0.16	+0.4
2,757,856	-		IAI47_13045	0.17	-1.5
2,757,890	+		IAI47_13045	0.20	-0.4
2,757,890	+		IAI47_13045	0.20	+0.5
2,757,890	+		IAI47_13045	0.20	+0.4
2,757,890	+		IAI47_13045	0.20	+1.2
2,757,891	-		IAI47_13045	0.20	+0.7
2,757,891	-		IAI47_13045	0.20	-1.0
2,757,891	-		IAI47_13045	0.20	-0.6
2,757,891	-		IAI47_13045	0.20	-0.4
2,757,891	-		IAI47_13045	0.20	-0.9
2,757,891	-		IAI47_13045	0.20	+0.5
2,757,891	-		IAI47_13045	0.20	+2.6
2,757,948	+		IAI47_13045	0.25	+0.3
2,757,987	-		IAI47_13045	0.29	-0.2
2,757,987	-		IAI47_13045	0.29	-1.2
2,757,987	-		IAI47_13045	0.29	-0.4
2,758,041	+		IAI47_13045	0.33	+0.8
2,758,042	-		IAI47_13045	0.34	-1.0
2,758,097	+		IAI47_13045	0.38	-1.4
2,758,097	+		IAI47_13045	0.38	-0.2
2,758,098	-		IAI47_13045	0.39	-0.5
2,758,098	-		IAI47_13045	0.39	-0.2
2,758,098	-		IAI47_13045	0.39	-1.6
2,758,115	+		IAI47_13045	0.40	-0.4
2,758,115	+		IAI47_13045	0.40	+0.4
2,758,116	-		IAI47_13045	0.40	+0.9
2,758,116	-		IAI47_13045	0.40	+0.1
2,758,123	-		IAI47_13045	0.41	-2.2
2,758,166	+		IAI47_13045	0.45	-2.8
2,758,205	+		IAI47_13045	0.48	+0.1
2,758,205	+		IAI47_13045	0.48	+3.2
2,758,206	-		IAI47_13045	0.48	-0.7
2,758,206	-		IAI47_13045	0.48	+1.0
2,758,206	-		IAI47_13045	0.48	-2.4
2,758,206	-		IAI47_13045	0.48	-1.4
2,758,342	-		IAI47_13045	0.61	-0.8
2,758,342	-		IAI47_13045	0.61	-1.3
2,758,347	+		IAI47_13045	0.61	+2.3
2,758,347	+		IAI47_13045	0.61	-1.5
2,758,347	+		IAI47_13045	0.61	+1.3
2,758,357	-		IAI47_13045	0.62	-0.7
2,758,357	-		IAI47_13045	0.62	+0.6
2,758,357	-		IAI47_13045	0.62	-0.3
2,758,357	-		IAI47_13045	0.62	-0.4
2,758,358	+		IAI47_13045	0.62	-0.3
2,758,359	-		IAI47_13045	0.62	-1.1
2,758,359	-		IAI47_13045	0.62	+1.8
2,758,359	-		IAI47_13045	0.62	+0.8
2,758,359	-		IAI47_13045	0.62	+0.5
2,758,385	+		IAI47_13045	0.64	+0.2
2,758,385	+		IAI47_13045	0.64	+0.4
2,758,385	+		IAI47_13045	0.64	+0.5
2,758,385	+		IAI47_13045	0.64	+0.9
2,758,385	+		IAI47_13045	0.64	-1.5
2,758,386	-		IAI47_13045	0.65	-1.7
2,758,386	-		IAI47_13045	0.65	-2.2
2,758,397	+		IAI47_13045	0.65	-0.2
2,758,397	+		IAI47_13045	0.65	+0.1
2,758,398	-		IAI47_13045	0.66	-1.7
2,758,398	-		IAI47_13045	0.66	-1.4
2,758,398	-		IAI47_13045	0.66	-0.5
2,758,455	+		IAI47_13045	0.71	-2.2
2,758,456	-		IAI47_13045	0.71	+1.5
2,758,456	-		IAI47_13045	0.71	+0.5
2,758,456	-		IAI47_13045	0.71	+0.7
2,758,456	-		IAI47_13045	0.71	-0.4
2,758,456	-		IAI47_13045	0.71	+1.1
2,758,457	+		IAI47_13045	0.71	-1.7
2,758,458	-		IAI47_13045	0.71	-1.3
2,758,458	-		IAI47_13045	0.71	-1.3
2,758,461	+		IAI47_13045	0.71	-0.5
2,758,461	+		IAI47_13045	0.71	+3.0
2,758,462	-		IAI47_13045	0.71	+0.8
2,758,548	-		IAI47_13045	0.79	+0.8
2,758,607	+		IAI47_13045	0.84	-0.1
2,758,607	+		IAI47_13045	0.84	+2.8
2,758,607	+		IAI47_13045	0.84	-1.5
2,758,607	+		IAI47_13045	0.84	-2.5
2,758,607	+		IAI47_13045	0.84	+1.5
2,758,608	-		IAI47_13045	0.85	+1.4
2,758,608	-		IAI47_13045	0.85	-0.2
2,758,649	+		IAI47_13045	0.88	-0.7
2,758,650	+		IAI47_13045	0.88	+0.4
2,758,650	+		IAI47_13045	0.88	-0.0
2,758,650	+		IAI47_13045	0.88	+1.4
2,758,662	+		IAI47_13045	0.89	+0.3
2,758,662	+		IAI47_13045	0.89	+0.2
2,758,662	+		IAI47_13045	0.89	+0.3
2,758,662	+		IAI47_13045	0.89	+0.8
2,758,662	+		IAI47_13045	0.89	+0.6
2,758,663	-		IAI47_13045	0.89	-0.2
2,758,679	+				-0.6
2,758,679	+				+3.5
2,758,679	+				+1.8
2,758,680	-				+1.8
2,758,696	-				-1.2
2,758,741	+				-1.5
2,758,741	+				+0.4
2,758,741	+				+1.1
2,758,742	-				+0.7
2,758,779	+				+0.7
2,758,807	+				-0.3
2,758,807	+				+0.3
2,758,807	+				+1.3
2,758,808	-				-0.5
2,758,808	-				+0.1
2,758,808	-				+2.8
2,758,808	-				-1.4
2,758,808	-				+0.8
2,758,808	-				+0.6
2,758,876	-				+0.4
2,758,890	+				-0.5
2,758,906	+				+0.1
2,758,968	+				+1.8
2,758,969	-				-0.7
2,758,969	-				-0.1
2,758,969	-				+1.0
2,758,983	+				+2.9
2,759,008	+				+0.7
2,759,008	+				-0.5
2,759,009	-				+2.1
2,759,009	-				+1.4
2,759,019	-				-0.5
2,759,019	-				+0.1
2,759,023	+				+0.3
2,759,024	-				+0.2
2,759,046	+				+0.8
2,759,046	+				+0.8
2,759,047	-				-0.6
2,759,060	+				+0.8
2,759,060	+				+0.8
2,759,061	-				+0.1
2,759,061	-				-0.5
2,759,061	-				-0.9
2,759,061	-				+0.8
2,759,061	-				-1.5
2,759,061	-				-1.8
2,759,070	+				-0.6
2,759,143	+				+2.1
2,759,143	+				+0.6
2,759,143	+				-1.0
2,759,143	+				-2.0
2,759,144	-				+1.1
2,759,165	+				+0.9
2,759,166	-				-1.8
2,759,286	+		IAI47_13050	0.25	-1.7
2,759,286	+		IAI47_13050	0.25	-0.8
2,759,287	-		IAI47_13050	0.26	-1.1
2,759,312	-		IAI47_13050	0.31	-0.7
2,759,361	+		IAI47_13050	0.41	+0.1
2,759,362	-		IAI47_13050	0.41	-0.6
2,759,362	-		IAI47_13050	0.41	-0.4
2,759,379	+		IAI47_13050	0.45	-0.2
2,759,380	-		IAI47_13050	0.45	-1.8
2,759,380	-		IAI47_13050	0.45	-1.2
2,759,583	+		IAI47_13050	0.87	-2.2
2,759,583	+		IAI47_13050	0.87	-1.9
2,759,584	-		IAI47_13050	0.88	-1.7
2,759,646	+				-0.9
2,759,646	+				+1.4
2,759,646	+				+0.1
2,759,647	-				-2.7
2,759,647	-				-1.2
2,759,666	-				+1.4
2,759,678	+				-0.9
2,759,679	-				+0.6
2,759,679	-				+0.8
2,759,679	-				+0.1
2,759,679	-				-2.0
2,759,679	-				-2.0
2,759,679	-				-0.2
2,759,684	-				-0.9
2,759,746	-				+0.5