Strain Fitness in Pantoea sp. MT58 around IAI47_11315

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,389,571	-		IAI47_11310	0.32	-0.2
2,389,591	+		IAI47_11310	0.34	-0.4
2,389,796	+		IAI47_11310	0.53	+0.0
2,389,829	+		IAI47_11310	0.56	-1.4
2,389,829	+		IAI47_11310	0.56	-0.8
2,389,829	+		IAI47_11310	0.56	-1.0
2,389,829	+		IAI47_11310	0.56	-1.1
2,389,829	+				-0.4
2,389,829	+		IAI47_11310	0.56	-1.5
2,389,830	-		IAI47_11310	0.56	-1.1
2,389,830	-		IAI47_11310	0.56	-1.2
2,389,830	-		IAI47_11310	0.56	+0.8
2,389,830	-		IAI47_11310	0.56	-1.0
2,390,063	+		IAI47_11310	0.77	-1.6
2,390,063	+		IAI47_11310	0.77	-0.6
2,390,063	+		IAI47_11310	0.77	+0.0
2,390,064	-		IAI47_11310	0.77	+2.4
2,390,329	+				-1.4
2,390,329	+				-1.2
2,390,329	+				+1.3
2,390,330	-				-0.1
2,390,330	-				+1.4
2,390,330	-				+0.4
2,390,340	+				-1.0
2,390,359	+				-1.2
2,390,359	+				+0.4
2,390,367	-				-0.2
2,390,373	+				+0.3
2,390,373	+				+0.7
2,390,374	-				+0.0
2,390,374	-				-0.2
2,390,374	-				+1.5
2,390,374	-				-1.4
2,390,393	-				-1.4
2,390,406	+				+0.0
2,390,406	+				+0.4
2,390,407	-				+0.3
2,390,407	-				+1.0
2,390,407	-				-0.2
2,390,407	-				+1.0
2,390,407	-				+0.6
2,390,407	-				+0.4
2,390,407	-				+0.5
2,390,448	+				-0.8
2,390,449	-				+0.2
2,390,465	-				-0.1
2,390,504	+				-0.5
2,390,504	+				+1.1
2,390,504	+				-1.1
2,390,505	-				-0.4
2,390,505	-				-1.0
2,390,505	-				-0.6
2,390,505	-				+0.0
2,390,505	-				+0.1
2,390,505	-				+0.8
2,390,511	-				+2.1
2,390,571	-				+0.5
2,390,571	-				+1.8
2,390,627	+				-1.8
2,390,627	+				+1.3
2,390,628	-				+0.8
2,390,628	-				+0.0
2,390,628	-				+0.0
2,390,628	-				-0.4
2,390,628	-				+3.4
2,390,628	-				+0.7
2,390,703	+		IAI47_11315	0.16	-1.5
2,390,704	-		IAI47_11315	0.16	-1.2
2,390,718	+		IAI47_11315	0.17	+0.2
2,390,718	+		IAI47_11315	0.17	-0.8
2,390,718	+		IAI47_11315	0.17	-0.0
2,390,719	-		IAI47_11315	0.18	+0.9
2,390,719	-		IAI47_11315	0.18	+5.5
2,390,719	-		IAI47_11315	0.18	-0.4
2,390,786	+		IAI47_11315	0.25	+1.5
2,390,786	+		IAI47_11315	0.25	+1.4
2,390,786	+		IAI47_11315	0.25	+0.6
2,390,786	+		IAI47_11315	0.25	+1.6
2,390,786	+		IAI47_11315	0.25	-1.5
2,390,787	-		IAI47_11315	0.25	+0.0
2,390,787	-		IAI47_11315	0.25	-0.1
2,390,787	-		IAI47_11315	0.25	-1.3
2,390,787	-		IAI47_11315	0.25	-1.0
2,390,787	-		IAI47_11315	0.25	+0.7
2,390,803	+		IAI47_11315	0.27	-0.2
2,390,811	-		IAI47_11315	0.28	-1.4
2,390,844	-		IAI47_11315	0.31	+0.4
2,390,865	+		IAI47_11315	0.34	+0.0
2,390,865	+		IAI47_11315	0.34	+0.8
2,390,866	-		IAI47_11315	0.34	+0.5
2,390,866	-		IAI47_11315	0.34	+0.0
2,390,866	-		IAI47_11315	0.34	+0.8
2,390,901	+		IAI47_11315	0.38	-1.5
2,390,906	+		IAI47_11315	0.38	-0.6
2,390,906	+		IAI47_11315	0.38	+0.1
2,390,907	-		IAI47_11315	0.38	-0.2
2,390,962	-		IAI47_11315	0.44	+1.4
2,391,072	+		IAI47_11315	0.56	-1.0
2,391,072	+		IAI47_11315	0.56	-0.4
2,391,073	-		IAI47_11315	0.57	-1.5
2,391,073	-		IAI47_11315	0.57	-1.3
2,391,073	-		IAI47_11315	0.57	+1.4
2,391,073	-		IAI47_11315	0.57	-0.3
2,391,073	-		IAI47_11315	0.57	-1.4
2,391,077	+		IAI47_11315	0.57	+0.5
2,391,213	+		IAI47_11315	0.72	-1.2
2,391,213	+		IAI47_11315	0.72	-0.8
2,391,213	+		IAI47_11315	0.72	-2.0
2,391,213	+		IAI47_11315	0.72	-0.1
2,391,213	+		IAI47_11315	0.72	-2.7
2,391,214	-		IAI47_11315	0.72	+0.4
2,391,214	-		IAI47_11315	0.72	-2.2
2,391,214	-		IAI47_11315	0.72	+0.4
2,391,214	-		IAI47_11315	0.72	-2.2
2,391,233	+		IAI47_11315	0.74	-1.2
2,391,264	+		IAI47_11315	0.78	-1.3
2,391,265	-		IAI47_11315	0.78	+1.3
2,391,265	-		IAI47_11315	0.78	-1.5
2,391,313	-		IAI47_11315	0.83	+0.5
2,391,374	+		IAI47_11315	0.90	-1.3
2,391,375	-		IAI47_11315	0.90	+1.4
2,391,375	-		IAI47_11315	0.90	-1.4
2,391,429	+				+1.1
2,391,430	-				-0.2
2,391,450	+				+0.2
2,391,450	+				+1.4
2,391,450	+				+1.4
2,391,450	+				-1.0
2,391,450	+				+0.6
2,391,450	+				-0.4
2,391,450	+				+0.8
2,391,450	+				+0.8
2,391,450	+				+2.4
2,391,450	+				+0.6
2,391,450	+				+0.5
2,391,451	-				+1.0
2,391,451	-				-1.1
2,391,451	-				+0.7
2,391,451	-				-0.4
2,391,451	-				-0.1
2,391,451	-				-0.2
2,391,451	-				+1.2
2,391,451	-				+0.4
2,391,451	-				+1.4
2,391,452	+				-0.2
2,391,453	-				+0.5
2,391,475	+				-1.6
2,391,475	+				-0.8
2,391,475	+				+0.8
2,391,475	+				-0.8
2,391,476	-				-1.4
2,391,490	-				-2.4
2,391,546	+				-0.8
2,391,566	-				+0.0
2,391,592	+				+1.2
2,391,592	+				+0.4
2,391,592	+				+1.4
2,391,593	-				-0.6
2,391,593	-				+1.2
2,391,601	+				-1.0
2,391,602	-				-2.0
2,391,602	-				-1.0
2,391,611	+				+0.4
2,391,622	+				-0.4
2,391,622	+				+0.6
2,391,639	+				-1.4
2,391,639	+				-2.6
2,391,639	+				-0.1
2,391,639	+				-1.3
2,391,640	-				+0.6
2,391,640	-				+1.6
2,391,640	-				-0.4
2,391,640	-				-1.4
2,391,673	+				+0.1
2,391,735	+		IAI47_11320	0.16	-1.0
2,391,743	+		IAI47_11320	0.17	-1.9
2,391,743	+		IAI47_11320	0.17	-1.0
2,391,766	+		IAI47_11320	0.20	+0.6
2,391,767	-		IAI47_11320	0.20	+0.8
2,391,898	-		IAI47_11320	0.36	+0.7
2,391,907	+		IAI47_11320	0.37	-1.1
2,391,907	+		IAI47_11320	0.37	+2.4
2,391,907	+		IAI47_11320	0.37	-1.0
2,391,908	-		IAI47_11320	0.37	+0.4
2,391,908	-		IAI47_11320	0.37	+0.2
2,391,922	+		IAI47_11320	0.39	+0.5
2,391,923	-		IAI47_11320	0.39	+1.0
2,391,925	+		IAI47_11320	0.40	-1.6
2,391,926	-		IAI47_11320	0.40	-0.5
2,391,926	-		IAI47_11320	0.40	+1.1
2,391,945	+		IAI47_11320	0.42	-0.8
2,391,946	-		IAI47_11320	0.42	+1.3
2,392,006	+		IAI47_11320	0.49	+0.1
2,392,006	+		IAI47_11320	0.49	-0.8
2,392,006	+		IAI47_11320	0.49	-0.3
2,392,007	-		IAI47_11320	0.50	+0.4
2,392,007	-		IAI47_11320	0.50	-2.3
2,392,011	-		IAI47_11320	0.50	+0.1
2,392,037	+		IAI47_11320	0.53	+1.0
2,392,037	+		IAI47_11320	0.53	-2.5
2,392,037	+		IAI47_11320	0.53	+0.1
2,392,038	-		IAI47_11320	0.53	-0.4
2,392,038	-		IAI47_11320	0.53	+0.8
2,392,038	-		IAI47_11320	0.53	-0.2
2,392,038	-		IAI47_11320	0.53	-0.8
2,392,038	-		IAI47_11320	0.53	-1.7
2,392,040	+		IAI47_11320	0.54	+1.2
2,392,041	-		IAI47_11320	0.54	-1.1
2,392,041	-		IAI47_11320	0.54	+0.0
2,392,046	+		IAI47_11320	0.54	+2.4
2,392,047	-		IAI47_11320	0.54	+1.4
2,392,068	-		IAI47_11320	0.57	+0.8
2,392,073	+		IAI47_11320	0.58	+0.4
2,392,074	-		IAI47_11320	0.58	+0.8
2,392,074	-		IAI47_11320	0.58	+1.9
2,392,084	-		IAI47_11320	0.59	+0.4
2,392,149	+		IAI47_11320	0.67	-0.5
2,392,149	+		IAI47_11320	0.67	-0.8
2,392,149	+		IAI47_11320	0.67	+0.8
2,392,149	+		IAI47_11320	0.67	+2.6
2,392,149	+		IAI47_11320	0.67	+0.3
2,392,150	-		IAI47_11320	0.67	+0.0
2,392,150	-		IAI47_11320	0.67	+0.2
2,392,150	-		IAI47_11320	0.67	-0.4
2,392,150	-		IAI47_11320	0.67	+0.5
2,392,388	+				-0.6
2,392,388	+				+0.6
2,392,428	-				+1.4
2,392,428	-				+0.0