Strain Fitness in Pantoea sp. MT58 around IAI47_10485

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,221,039	-				-1.6
2,221,049	+				-1.1
2,221,050	-				-0.2
2,221,063	+				-0.1
2,221,068	+				-0.2
2,221,069	-				-0.6
2,221,147	-		IAI47_10480	0.11	+0.8
2,221,147	-		IAI47_10480	0.11	+0.3
2,221,150	+		IAI47_10480	0.11	-0.3
2,221,150	+		IAI47_10480	0.11	+0.7
2,221,198	-		IAI47_10480	0.18	-0.9
2,221,279	-		IAI47_10480	0.29	+2.9
2,221,483	+		IAI47_10480	0.57	+1.3
2,221,484	-		IAI47_10480	0.57	-0.1
2,221,546	+		IAI47_10480	0.66	-0.3
2,221,546	+		IAI47_10480	0.66	-0.8
2,221,546	+		IAI47_10480	0.66	-2.0
2,221,547	-		IAI47_10480	0.66	-0.4
2,221,547	-		IAI47_10480	0.66	+1.9
2,221,547	-		IAI47_10480	0.66	-1.4
2,221,547	-		IAI47_10480	0.66	+1.2
2,221,547	-		IAI47_10480	0.66	+0.5
2,221,547	-		IAI47_10480	0.66	-1.3
2,221,547	-		IAI47_10480	0.66	+1.0
2,221,547	-		IAI47_10480	0.66	+0.2
2,221,547	-		IAI47_10480	0.66	+2.2
2,221,547	-		IAI47_10480	0.66	-1.1
2,221,582	+		IAI47_10480	0.71	+0.2
2,221,583	-		IAI47_10480	0.71	+0.3
2,221,585	+		IAI47_10480	0.72	+1.3
2,221,585	+		IAI47_10480	0.72	+0.9
2,221,586	-		IAI47_10480	0.72	+0.7
2,221,692	+		IAI47_10480	0.86	-0.5
2,221,692	+		IAI47_10480	0.86	-0.8
2,221,693	-		IAI47_10480	0.87	-0.1
2,221,693	-		IAI47_10480	0.87	+0.7
2,221,693	-		IAI47_10480	0.87	+0.5
2,221,693	-		IAI47_10480	0.87	-0.0
2,221,693	-		IAI47_10480	0.87	-0.3
2,221,714	+		IAI47_10480	0.89	+1.1
2,221,715	-		IAI47_10480	0.90	-0.7
2,221,747	-				+1.0
2,221,747	-				+0.1
2,221,747	-				-1.6
2,221,900	+				+2.0
2,221,901	-				-0.5
2,221,901	-				+1.9
2,221,905	+				+0.7
2,221,905	+				-1.0
2,221,905	+				+1.7
2,221,905	+				-0.3
2,221,906	-				-1.6
2,221,906	-				+1.1
2,221,906	-				-1.0
2,221,911	+				-0.7
2,221,912	-				+1.7
2,221,912	-				+1.3
2,221,961	+				+0.6
2,221,961	+				+1.4
2,222,011	-				+0.6
2,222,092	+				+1.3
2,222,092	+				+0.3
2,222,092	+				-1.4
2,222,093	-				+1.1
2,222,093	-				-0.8
2,222,093	-				-1.1
2,222,093	-				-1.1
2,222,093	-				+0.7
2,222,126	-				+0.0
2,222,147	-				-0.2
2,222,155	+				-1.0
2,222,155	+				+1.0
2,222,156	-				-0.1
2,222,156	-				-1.0
2,222,258	-		IAI47_10485	0.17	+1.7
2,222,305	+		IAI47_10485	0.21	+0.2
2,222,305	+		IAI47_10485	0.21	+0.6
2,222,306	-		IAI47_10485	0.21	-1.0
2,222,306	-		IAI47_10485	0.21	-0.6
2,222,311	+		IAI47_10485	0.21	+0.3
2,222,311	+		IAI47_10485	0.21	+0.9
2,222,311	+		IAI47_10485	0.21	+1.1
2,222,311	+		IAI47_10485	0.21	-0.3
2,222,311	+		IAI47_10485	0.21	-0.5
2,222,312	-		IAI47_10485	0.21	-0.6
2,222,418	+		IAI47_10485	0.29	-0.2
2,222,419	-		IAI47_10485	0.29	+1.1
2,222,426	+		IAI47_10485	0.30	+0.2
2,222,427	-		IAI47_10485	0.30	+2.1
2,222,427	-		IAI47_10485	0.30	+1.3
2,222,427	-		IAI47_10485	0.30	+0.5
2,222,692	-		IAI47_10485	0.50	-0.1
2,222,692	-		IAI47_10485	0.50	-1.3
2,222,704	+		IAI47_10485	0.51	+1.0
2,222,704	+		IAI47_10485	0.51	-0.8
2,222,704	+		IAI47_10485	0.51	-1.1
2,222,705	-		IAI47_10485	0.51	+0.8
2,222,760	+		IAI47_10485	0.55	+0.3
2,222,760	+		IAI47_10485	0.55	+0.2
2,222,761	-		IAI47_10485	0.55	-0.7
2,222,761	-		IAI47_10485	0.55	+0.0
2,222,761	-		IAI47_10485	0.55	+0.5
2,222,764	+		IAI47_10485	0.55	+0.7
2,222,764	+		IAI47_10485	0.55	+0.7
2,222,764	+		IAI47_10485	0.55	-1.1
2,222,765	-		IAI47_10485	0.55	-1.0
2,222,765	-		IAI47_10485	0.55	+1.1
2,222,819	+		IAI47_10485	0.59	-1.0
2,222,820	-		IAI47_10485	0.59	-0.8
2,222,820	-		IAI47_10485	0.59	-0.3
2,222,820	-		IAI47_10485	0.59	-1.0
2,222,820	-		IAI47_10485	0.59	-0.7
2,222,821	+		IAI47_10485	0.59	-0.5
2,222,821	+		IAI47_10485	0.59	-0.4
2,222,821	+		IAI47_10485	0.59	-1.3
2,222,821	+		IAI47_10485	0.59	-0.7
2,222,821	+		IAI47_10485	0.59	-0.5
2,222,848	+		IAI47_10485	0.61	+1.3
2,222,848	+		IAI47_10485	0.61	-0.6
2,222,848	+		IAI47_10485	0.61	+0.0
2,222,848	+		IAI47_10485	0.61	+2.3
2,222,849	-		IAI47_10485	0.61	-1.0
2,222,858	-		IAI47_10485	0.62	+1.3
2,222,858	-		IAI47_10485	0.62	+0.0
2,222,858	-		IAI47_10485	0.62	-0.7
2,222,902	-		IAI47_10485	0.65	+0.4
2,222,920	+		IAI47_10485	0.67	+0.7
2,222,920	+		IAI47_10485	0.67	+0.0
2,222,921	-		IAI47_10485	0.67	-1.4
2,222,921	-		IAI47_10485	0.67	-0.8
2,223,019	+		IAI47_10485	0.74	+0.3
2,223,020	-		IAI47_10485	0.74	+0.4
2,223,020	-		IAI47_10485	0.74	-1.1
2,223,025	+		IAI47_10485	0.74	-1.0
2,223,025	+		IAI47_10485	0.74	-1.1
2,223,212	+		IAI47_10485	0.88	+0.7
2,223,251	+				+0.7
2,223,252	-				+3.1
2,223,252	-				-1.8
2,223,252	-				-0.3
2,223,252	-				-0.1
2,223,331	+				-0.1
2,223,331	+				+1.3
2,223,332	-				-1.4
2,223,365	+				+0.0
2,223,366	-				+0.0
2,223,397	-				-1.0
2,223,397	-				+2.2
2,223,397	-				-0.8
2,223,438	+				+0.0
2,223,438	+				+1.0
2,223,438	+				-1.0
2,223,439	-				-0.7
2,223,439	-				+1.4
2,223,647	+		IAI47_10490	0.22	+0.9
2,223,647	+		IAI47_10490	0.22	+1.3
2,223,647	+		IAI47_10490	0.22	+0.1
2,223,647	+		IAI47_10490	0.22	+0.6
2,223,648	-		IAI47_10490	0.23	+0.8
2,223,648	-		IAI47_10490	0.23	+1.8
2,223,676	-		IAI47_10490	0.25	-0.5
2,223,707	-		IAI47_10490	0.27	+0.7
2,223,751	+		IAI47_10490	0.30	-0.8
2,223,751	+		IAI47_10490	0.30	-1.8
2,223,751	+		IAI47_10490	0.30	+2.6
2,223,751	+		IAI47_10490	0.30	+0.8
2,223,752	-		IAI47_10490	0.30	-1.1
2,223,787	+		IAI47_10490	0.33	+0.2
2,223,796	-		IAI47_10490	0.34	+0.8
2,223,804	+		IAI47_10490	0.34	-0.7
2,223,804	+		IAI47_10490	0.34	-1.8
2,223,804	+		IAI47_10490	0.34	-0.1
2,223,805	-		IAI47_10490	0.34	-0.1
2,223,805	-		IAI47_10490	0.34	-0.2
2,223,805	-		IAI47_10490	0.34	+0.8
2,223,805	-		IAI47_10490	0.34	+1.0
2,223,837	+		IAI47_10490	0.37	+0.4
2,223,943	-		IAI47_10490	0.44	+1.9
2,223,943	-		IAI47_10490	0.44	-0.4
2,223,960	-		IAI47_10490	0.46	-1.1
2,223,960	-		IAI47_10490	0.46	+1.1
2,223,960	-		IAI47_10490	0.46	-0.2
2,224,086	+		IAI47_10490	0.55	+0.6
2,224,086	+		IAI47_10490	0.55	-0.6
2,224,086	+		IAI47_10490	0.55	-0.1
2,224,086	+		IAI47_10490	0.55	-0.2
2,224,086	+		IAI47_10490	0.55	-0.2
2,224,086	+		IAI47_10490	0.55	-0.8
2,224,086	+		IAI47_10490	0.55	+3.1
2,224,087	-		IAI47_10490	0.55	-1.0
2,224,087	-		IAI47_10490	0.55	+2.8
2,224,087	-		IAI47_10490	0.55	-0.4
2,224,087	-		IAI47_10490	0.55	-0.8
2,224,087	-		IAI47_10490	0.55	+0.2
2,224,087	-		IAI47_10490	0.55	-0.8
2,224,087	-		IAI47_10490	0.55	-1.0
2,224,087	-		IAI47_10490	0.55	-1.5
2,224,089	+		IAI47_10490	0.55	-0.5
2,224,090	-		IAI47_10490	0.55	-0.8
2,224,090	-		IAI47_10490	0.55	+1.3
2,224,094	+		IAI47_10490	0.56	-0.4
2,224,094	+		IAI47_10490	0.56	-2.1
2,224,094	+		IAI47_10490	0.56	-0.0
2,224,094	+		IAI47_10490	0.56	+0.2
2,224,095	-		IAI47_10490	0.56	-1.1
2,224,153	-		IAI47_10490	0.60	+0.8
2,224,182	-		IAI47_10490	0.62	-0.2
2,224,214	+		IAI47_10490	0.65	-0.2
2,224,214	+		IAI47_10490	0.65	+0.2
2,224,215	-		IAI47_10490	0.65	+0.5
2,224,215	-		IAI47_10490	0.65	-0.8
2,224,253	-		IAI47_10490	0.68	+0.6
2,224,253	-		IAI47_10490	0.68	-1.8
2,224,253	-		IAI47_10490	0.68	+1.5
2,224,253	-		IAI47_10490	0.68	-1.7
2,224,253	-		IAI47_10490	0.68	-0.9
2,224,259	+		IAI47_10490	0.68	-0.4
2,224,259	+		IAI47_10490	0.68	-0.3
2,224,259	+		IAI47_10490	0.68	-1.2
2,224,259	+		IAI47_10490	0.68	-0.3
2,224,259	+		IAI47_10490	0.68	+0.2
2,224,260	-		IAI47_10490	0.68	+0.4
2,224,260	-		IAI47_10490	0.68	-1.1
2,224,260	-		IAI47_10490	0.68	-0.2
2,224,307	+		IAI47_10490	0.72	-1.1
2,224,307	+		IAI47_10490	0.72	-0.1
2,224,308	-		IAI47_10490	0.72	-1.1
2,224,316	+		IAI47_10490	0.72	-0.2
2,224,316	+		IAI47_10490	0.72	+0.8
2,224,316	+		IAI47_10490	0.72	+0.0
2,224,316	+		IAI47_10490	0.72	-0.7
2,224,316	+		IAI47_10490	0.72	+2.7
2,224,317	-		IAI47_10490	0.72	+0.7
2,224,317	-		IAI47_10490	0.72	+1.9