Strain Fitness in Pantoea sp. MT58 around IAI47_10215

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,158,051	+		IAI47_10205	0.38	-0.3
2,158,051	+		IAI47_10205	0.38	+0.3
2,158,051	+		IAI47_10205	0.38	-1.3
2,158,052	-		IAI47_10205	0.38	-1.7
2,158,052	-		IAI47_10205	0.38	+0.1
2,158,052	-		IAI47_10205	0.38	+0.7
2,158,052	-		IAI47_10205	0.38	+0.7
2,158,052	-		IAI47_10205	0.38	+0.0
2,158,054	+		IAI47_10205	0.38	-0.5
2,158,055	-		IAI47_10205	0.38	+0.8
2,158,055	-		IAI47_10205	0.38	+0.2
2,158,055	-		IAI47_10205	0.38	+0.2
2,158,115	-		IAI47_10205	0.43	-0.3
2,158,179	-		IAI47_10205	0.49	-0.1
2,158,179	-		IAI47_10205	0.49	-1.5
2,158,195	+		IAI47_10205	0.50	-1.6
2,158,196	-		IAI47_10205	0.50	-1.3
2,158,241	+		IAI47_10205	0.54	+0.1
2,158,242	-		IAI47_10205	0.54	-0.5
2,158,260	-		IAI47_10205	0.56	-1.0
2,158,277	+		IAI47_10205	0.57	-0.8
2,158,277	+		IAI47_10205	0.57	-0.1
2,158,278	-		IAI47_10205	0.57	-2.3
2,158,278	-		IAI47_10205	0.57	+1.0
2,158,278	-		IAI47_10205	0.57	-0.7
2,158,425	-		IAI47_10205	0.70	+0.2
2,158,499	+		IAI47_10205	0.77	-0.3
2,158,499	+		IAI47_10205	0.77	+0.1
2,158,499	+		IAI47_10205	0.77	-1.0
2,158,501	+		IAI47_10205	0.77	-0.3
2,158,501	+		IAI47_10205	0.77	+2.0
2,158,501	+		IAI47_10205	0.77	-1.3
2,158,501	+		IAI47_10205	0.77	+0.5
2,158,502	-		IAI47_10205	0.77	-0.3
2,158,674	-				+0.7
2,158,681	+				+0.7
2,158,682	-				+0.7
2,158,682	-				-0.5
2,158,705	+				+3.6
2,158,705	+				-0.8
2,158,705	+				+1.9
2,158,705	+				+0.4
2,158,705	+				-0.6
2,158,706	-				+0.3
2,158,706	-				+0.3
2,158,706	-				+0.7
2,158,751	+				-0.8
2,158,752	-				+1.5
2,158,752	-				+0.3
2,158,752	-				-0.7
2,158,771	+				+0.5
2,158,771	+				-0.3
2,158,772	-				-0.6
2,158,787	+		IAI47_10210	0.13	+0.2
2,158,787	+		IAI47_10210	0.13	+0.3
2,158,787	+		IAI47_10210	0.13	-0.2
2,158,787	+		IAI47_10210	0.13	-0.5
2,158,787	+		IAI47_10210	0.13	+0.0
2,158,788	-		IAI47_10210	0.14	+0.5
2,158,788	-		IAI47_10210	0.14	-0.8
2,158,808	-		IAI47_10210	0.21	+1.1
2,158,808	-		IAI47_10210	0.21	-0.4
2,158,808	-		IAI47_10210	0.21	+1.6
2,158,875	+		IAI47_10210	0.45	+0.5
2,158,876	-		IAI47_10210	0.45	+0.3
2,158,947	-		IAI47_10210	0.71	-0.7
2,158,962	+		IAI47_10210	0.76	-1.1
2,158,963	-		IAI47_10210	0.76	+0.3
2,158,986	+		IAI47_10210	0.85	-1.5
2,158,986	+		IAI47_10210	0.85	-1.6
2,158,986	+		IAI47_10210	0.85	-1.1
2,158,987	-		IAI47_10210	0.85	-0.4
2,158,987	-		IAI47_10210	0.85	-1.5
2,158,987	-		IAI47_10210	0.85	+0.3
2,158,987	-		IAI47_10210	0.85	+1.9
2,159,034	-				-1.2
2,159,034	-				+0.1
2,159,034	-				-1.8
2,159,034	-				+0.3
2,159,034	-				-1.8
2,159,035	+				+3.7
2,159,035	+				+0.8
2,159,035	+				+1.1
2,159,036	-				+1.0
2,159,036	-				+0.9
2,159,102	+				+1.3
2,159,102	+				+1.9
2,159,102	+				-1.6
2,159,102	+				+1.1
2,159,102	+				+1.7
2,159,103	-				+2.0
2,159,134	+		IAI47_10215	0.13	-1.6
2,159,135	-		IAI47_10215	0.14	+0.7
2,159,148	+		IAI47_10215	0.15	+0.5
2,159,148	+		IAI47_10215	0.15	-1.1
2,159,148	+		IAI47_10215	0.15	-0.7
2,159,148	+		IAI47_10215	0.15	-0.1
2,159,198	+		IAI47_10215	0.22	+1.0
2,159,199	-		IAI47_10215	0.22	+1.0
2,159,199	-		IAI47_10215	0.22	-0.1
2,159,199	-		IAI47_10215	0.22	+0.7
2,159,264	+		IAI47_10215	0.31	-0.5
2,159,265	-		IAI47_10215	0.31	-1.8
2,159,270	+		IAI47_10215	0.31	-1.1
2,159,270	+		IAI47_10215	0.31	-0.1
2,159,294	+		IAI47_10215	0.35	-0.8
2,159,400	+		IAI47_10215	0.49	+1.7
2,159,401	-		IAI47_10215	0.49	+0.0
2,159,405	+		IAI47_10215	0.49	-0.6
2,159,405	+		IAI47_10215	0.49	-0.7
2,159,405	+		IAI47_10215	0.49	-0.1
2,159,405	+		IAI47_10215	0.49	+0.4
2,159,405	+		IAI47_10215	0.49	+0.2
2,159,405	+		IAI47_10215	0.49	+0.8
2,159,406	-		IAI47_10215	0.49	-2.1
2,159,406	-		IAI47_10215	0.49	-2.4
2,159,406	-		IAI47_10215	0.49	-0.3
2,159,406	-		IAI47_10215	0.49	-0.1
2,159,406	-		IAI47_10215	0.49	+1.3
2,159,406	-		IAI47_10215	0.49	+1.2
2,159,589	+		IAI47_10215	0.74	+0.0
2,159,590	-		IAI47_10215	0.74	+2.3
2,159,590	-		IAI47_10215	0.74	-0.2
2,159,630	+		IAI47_10215	0.79	+1.2
2,159,633	+		IAI47_10215	0.79	-0.7
2,159,634	-		IAI47_10215	0.80	+0.0
2,159,634	-		IAI47_10215	0.80	-0.1
2,159,634	-		IAI47_10215	0.80	+0.3
2,159,634	-		IAI47_10215	0.80	+1.7
2,159,634	-		IAI47_10215	0.80	+0.7
2,159,634	-		IAI47_10215	0.80	-1.4
2,159,686	-		IAI47_10215	0.87	-0.8
2,159,716	-				+0.5
2,159,720	+				-0.3
2,159,720	+				+0.9
2,159,720	+				-0.1
2,159,720	+				+0.4
2,159,720	+				+0.4
2,159,720	+				-0.5
2,159,720	+				-1.8
2,159,720	+				-0.0
2,159,720	+				+1.0
2,159,720	+				+0.1
2,159,721	-				-1.9
2,159,721	-				+0.4
2,159,721	-				-0.7
2,159,721	-				+0.1
2,159,721	-				+0.7
2,159,721	-				-0.4
2,159,721	-				+0.2
2,159,721	-				-1.6
2,159,721	-				-0.1
2,159,721	-				+0.7
2,159,723	+				-0.7
2,159,723	+				+0.0
2,159,723	+				-2.0
2,159,723	+				-0.8
2,159,723	+				-1.5
2,159,724	-				-1.3
2,159,724	-				-0.2
2,159,724	-				-1.1
2,159,792	+				-0.8
2,159,833	+				-0.5
2,159,834	-				+4.3
2,159,834	-				+1.2
2,159,877	+				-0.2
2,159,898	+		IAI47_10220	0.12	-0.2
2,159,899	-		IAI47_10220	0.12	+2.3
2,159,899	-		IAI47_10220	0.12	-0.5
2,159,899	-		IAI47_10220	0.12	+0.7
2,160,088	+		IAI47_10220	0.32	+0.9
2,160,088	+		IAI47_10220	0.32	+1.9
2,160,122	+		IAI47_10220	0.36	+1.2
2,160,122	+		IAI47_10220	0.36	+1.0
2,160,123	-		IAI47_10220	0.36	-0.9
2,160,206	+		IAI47_10220	0.45	-0.7
2,160,206	+		IAI47_10220	0.45	+0.9
2,160,206	+		IAI47_10220	0.45	+1.0
2,160,225	+		IAI47_10220	0.47	-0.7
2,160,226	-		IAI47_10220	0.47	+0.8
2,160,304	+		IAI47_10220	0.56	-0.7
2,160,304	+		IAI47_10220	0.56	-2.0
2,160,304	+		IAI47_10220	0.56	-2.2
2,160,304	+		IAI47_10220	0.56	+0.3
2,160,305	-		IAI47_10220	0.56	+1.9
2,160,305	-		IAI47_10220	0.56	-0.8
2,160,378	+		IAI47_10220	0.64	-0.1
2,160,378	+		IAI47_10220	0.64	+1.5
2,160,510	+		IAI47_10220	0.78	+0.6
2,160,511	-		IAI47_10220	0.78	+0.5
2,160,511	-		IAI47_10220	0.78	+0.9
2,160,511	-		IAI47_10220	0.78	+0.4
2,160,511	-		IAI47_10220	0.78	+0.1
2,160,511	-		IAI47_10220	0.78	-0.5
2,160,550	+		IAI47_10220	0.83	-0.4
2,160,550	+		IAI47_10220	0.83	-0.4
2,160,550	+		IAI47_10220	0.83	-1.4
2,160,550	+		IAI47_10220	0.83	+1.3
2,160,551	-		IAI47_10220	0.83	+0.7
2,160,551	-		IAI47_10220	0.83	+0.2
2,160,551	-		IAI47_10220	0.83	+0.0
2,160,551	-		IAI47_10220	0.83	+1.2
2,160,551	-		IAI47_10220	0.83	+0.7
2,160,551	-		IAI47_10220	0.83	+0.0
2,160,582	+		IAI47_10220	0.86	-1.4
2,160,583	-		IAI47_10220	0.86	-1.0
2,160,624	+				-0.5
2,160,625	-				-2.1
2,160,625	-				-1.3
2,160,651	+				+0.4
2,160,651	+				+0.6
2,160,651	+				-0.7
2,160,651	+				+0.3
2,160,651	+				+0.6
2,160,652	-				+0.2
2,160,652	-				+0.0
2,160,702	+				+0.5
2,160,708	+				+0.6
2,160,708	+				-0.5
2,160,708	+				+0.1
2,160,708	+				+2.4
2,160,709	-				+0.9
2,160,709	-				-3.2
2,160,765	-				-0.1
2,160,779	+		IAI47_10225	0.22	-1.6
2,160,779	+		IAI47_10225	0.22	-1.3
2,160,779	+		IAI47_10225	0.22	-1.5
2,160,780	-		IAI47_10225	0.24	+0.1
2,160,780	-		IAI47_10225	0.24	+1.7
2,160,780	-		IAI47_10225	0.24	+1.0
2,160,780	-		IAI47_10225	0.24	+0.1
2,160,780	-		IAI47_10225	0.24	+2.7