Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08900

Experiment: McCas_formate_complete Sulfaquinoxaline 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Sulfaquinoxaline 0.1 mM
1,640,862	-		MMJJ_RS08890	0.47	+0.7
1,640,862	-		MMJJ_RS08890	0.47	+1.7
1,640,863	+		MMJJ_RS08890	0.47	-0.5
1,640,863	+		MMJJ_RS08890	0.47	+0.6
1,640,864	-		MMJJ_RS08890	0.47	+0.0
1,640,864	-		MMJJ_RS08890	0.47	+0.2
1,640,864	-		MMJJ_RS08890	0.47	-0.6
1,640,864	-		MMJJ_RS08890	0.47	+0.7
1,640,865	+		MMJJ_RS08890	0.47	+0.9
1,640,865	+		MMJJ_RS08890	0.47	-0.1
1,640,865	+		MMJJ_RS08890	0.47	+0.5
1,640,865	+		MMJJ_RS08890	0.47	-1.3
1,640,865	+		MMJJ_RS08890	0.47	+3.7
1,640,865	+		MMJJ_RS08890	0.47	+0.5
1,640,865	+		MMJJ_RS08890	0.47	+0.7
1,640,865	+		MMJJ_RS08890	0.47	-0.2
1,640,865	+		MMJJ_RS08890	0.47	-0.0
1,640,866	-		MMJJ_RS08890	0.47	-0.6
1,640,866	-		MMJJ_RS08890	0.47	+0.7
1,640,866	-		MMJJ_RS08890	0.47	-0.7
1,640,866	-		MMJJ_RS08890	0.47	+0.1
1,640,866	-		MMJJ_RS08890	0.47	-0.7
1,640,866	-		MMJJ_RS08890	0.47	-1.6
1,640,866	-		MMJJ_RS08890	0.47	+1.0
1,640,866	-		MMJJ_RS08890	0.47	-1.3
1,640,866	-		MMJJ_RS08890	0.47	-0.2
1,640,866	-		MMJJ_RS08890	0.47	+1.9
1,640,866	-		MMJJ_RS08890	0.47	-0.6
1,640,867	+		MMJJ_RS08890	0.47	-0.1
1,640,867	+		MMJJ_RS08890	0.47	-2.3
1,640,867	+		MMJJ_RS08890	0.47	-0.6
1,640,867	+		MMJJ_RS08890	0.47	+1.5
1,640,867	+		MMJJ_RS08890	0.47	+0.4
1,640,867	+		MMJJ_RS08890	0.47	+3.1
1,640,867	+		MMJJ_RS08890	0.47	+1.1
1,640,867	+		MMJJ_RS08890	0.47	-0.6
1,640,968	-		MMJJ_RS08890	0.54	+0.1
1,640,968	-		MMJJ_RS08890	0.54	-0.3
1,640,969	+		MMJJ_RS08890	0.54	-0.5
1,641,032	+		MMJJ_RS08890	0.58	-1.5
1,641,033	-		MMJJ_RS08890	0.58	+1.6
1,641,035	-		MMJJ_RS08890	0.59	+0.0
1,641,112	+		MMJJ_RS08890	0.64	-0.3
1,641,115	-				+0.5
1,641,156	-		MMJJ_RS08890	0.67	-0.8
1,641,160	+		MMJJ_RS08890	0.67	+1.4
1,641,220	+		MMJJ_RS08890	0.71	+0.6
1,641,361	-		MMJJ_RS08890	0.81	-0.7
1,641,362	+		MMJJ_RS08890	0.81	+2.8
1,641,394	-		MMJJ_RS08890	0.83	-0.6
1,641,434	+		MMJJ_RS08890	0.86	-2.3
1,641,440	-		MMJJ_RS08890	0.86	-1.5
1,641,440	-		MMJJ_RS08890	0.86	+1.9
1,641,441	+		MMJJ_RS08890	0.87	-0.8
1,641,441	+		MMJJ_RS08890	0.87	+0.1
1,641,441	+		MMJJ_RS08890	0.87	-0.3
1,641,445	+		MMJJ_RS08890	0.87	+0.5
1,641,445	+		MMJJ_RS08890	0.87	+0.2
1,641,445	+		MMJJ_RS08890	0.87	+1.5
1,641,466	-		MMJJ_RS08890	0.88	+1.2
1,641,468	-		MMJJ_RS08890	0.88	-2.2
1,641,505	-				+0.6
1,641,542	+				+0.3
1,641,547	+				+0.7
1,641,551	-				-0.6
1,641,607	+				-0.6
1,641,686	-				-2.3
1,641,687	+				+2.4
1,641,715	+				+1.1
1,641,730	+				-1.1
1,641,730	+				-0.7
1,641,760	-				+0.1
1,641,760	-				-1.4
1,641,773	-				-0.7
1,641,874	-				-0.3
1,641,900	+				-0.1
1,641,950	+				-0.5
1,642,047	-		MMJJ_RS08900	0.19	+0.8
1,642,081	+		MMJJ_RS08900	0.23	+0.5
1,642,081	+		MMJJ_RS08900	0.23	+0.5
1,642,082	-		MMJJ_RS08900	0.23	-0.4
1,642,082	-		MMJJ_RS08900	0.23	-0.4
1,642,082	-		MMJJ_RS08900	0.23	+0.8
1,642,082	-		MMJJ_RS08900	0.23	-0.4
1,642,082	-		MMJJ_RS08900	0.23	+0.0
1,642,082	-		MMJJ_RS08900	0.23	-0.2
1,642,082	-		MMJJ_RS08900	0.23	-0.6
1,642,082	-		MMJJ_RS08900	0.23	-0.3
1,642,083	+		MMJJ_RS08900	0.23	-1.3
1,642,083	+		MMJJ_RS08900	0.23	-0.9
1,642,083	+		MMJJ_RS08900	0.23	-0.5
1,642,083	+		MMJJ_RS08900	0.23	-1.2
1,642,083	+		MMJJ_RS08900	0.23	+2.3
1,642,083	+		MMJJ_RS08900	0.23	+2.7
1,642,083	+		MMJJ_RS08900	0.23	+0.2
1,642,083	+		MMJJ_RS08900	0.23	+0.1
1,642,083	+		MMJJ_RS08900	0.23	+0.8
1,642,083	+		MMJJ_RS08900	0.23	+0.1
1,642,083	+		MMJJ_RS08900	0.23	-0.8
1,642,083	+		MMJJ_RS08900	0.23	+0.2
1,642,083	+		MMJJ_RS08900	0.23	-0.8
1,642,084	-		MMJJ_RS08900	0.23	-0.0
1,642,095	+		MMJJ_RS08900	0.24	-0.7
1,642,095	+		MMJJ_RS08900	0.24	-1.1
1,642,109	-		MMJJ_RS08900	0.26	-0.9
1,642,112	-		MMJJ_RS08900	0.26	-0.2
1,642,211	-		MMJJ_RS08900	0.36	-0.2
1,642,218	-		MMJJ_RS08900	0.37	+0.1
1,642,243	-		MMJJ_RS08900	0.39	+2.3
1,642,244	+		MMJJ_RS08900	0.40	+0.8
1,642,244	+		MMJJ_RS08900	0.40	-3.2
1,642,244	+		MMJJ_RS08900	0.40	+0.5
1,642,244	+		MMJJ_RS08900	0.40	-0.9
1,642,250	-		MMJJ_RS08900	0.40	+0.2
1,642,263	+		MMJJ_RS08900	0.41	+0.6
1,642,335	+		MMJJ_RS08900	0.49	-1.2
1,642,337	+		MMJJ_RS08900	0.49	-1.5
1,642,338	-		MMJJ_RS08900	0.49	-0.5
1,642,339	+		MMJJ_RS08900	0.49	-0.2
1,642,363	+		MMJJ_RS08900	0.52	+0.5
1,642,377	+		MMJJ_RS08900	0.53	+0.9
1,642,418	+		MMJJ_RS08900	0.57	+0.4
1,642,418	+		MMJJ_RS08900	0.57	+0.5
1,642,419	-		MMJJ_RS08900	0.58	+2.0
1,642,420	+		MMJJ_RS08900	0.58	+0.0
1,642,420	+		MMJJ_RS08900	0.58	-3.0
1,642,420	+		MMJJ_RS08900	0.58	+0.6
1,642,420	+		MMJJ_RS08900	0.58	-1.3
1,642,480	-		MMJJ_RS08900	0.64	+1.0
1,642,542	+		MMJJ_RS08900	0.70	+2.8
1,642,594	-		MMJJ_RS08900	0.76	+0.7
1,642,595	+		MMJJ_RS08900	0.76	-0.1
1,642,602	+		MMJJ_RS08900	0.76	-1.2
1,642,610	-		MMJJ_RS08900	0.77	+3.0
1,642,611	+		MMJJ_RS08900	0.77	-0.7
1,642,620	+		MMJJ_RS08900	0.78	-0.1
1,642,681	+		MMJJ_RS08900	0.85	+1.8
1,642,698	-		MMJJ_RS08900	0.86	-0.9
1,642,699	+		MMJJ_RS08900	0.86	-1.1
1,642,699	+		MMJJ_RS08900	0.86	+0.2
1,642,709	+		MMJJ_RS08900	0.88	+0.7
1,642,718	+		MMJJ_RS08900	0.88	+0.5
1,642,725	+		MMJJ_RS08900	0.89	+2.4
1,642,858	+				+0.9
1,642,865	-				+0.3
1,642,879	+				-1.1
1,642,954	-				-0.9
1,642,971	-				+0.1
1,642,972	+				-0.1
1,642,972	+				+2.1
1,642,972	+				-0.9
1,642,984	-				-0.9
1,643,009	-				+1.5
1,643,009	-				+2.2
1,643,010	+		MMJJ_RS08905	0.10	-0.7
1,643,010	+		MMJJ_RS08905	0.10	+0.2
1,643,010	+		MMJJ_RS08905	0.10	-1.3
1,643,010	+		MMJJ_RS08905	0.10	+0.2
1,643,024	-		MMJJ_RS08905	0.11	-0.5
1,643,029	-		MMJJ_RS08905	0.12	-0.2
1,643,066	-		MMJJ_RS08905	0.15	+0.5
1,643,066	-		MMJJ_RS08905	0.15	+0.8
1,643,067	+		MMJJ_RS08905	0.15	+0.1
1,643,068	-		MMJJ_RS08905	0.15	+2.3
1,643,069	+		MMJJ_RS08905	0.15	+0.5
1,643,069	+		MMJJ_RS08905	0.15	+0.7
1,643,069	+		MMJJ_RS08905	0.15	-1.3
1,643,075	-		MMJJ_RS08905	0.15	-0.6
1,643,113	-		MMJJ_RS08905	0.19	+1.6
1,643,122	-		MMJJ_RS08905	0.19	+0.8
1,643,131	-		MMJJ_RS08905	0.20	-1.0
1,643,132	+		MMJJ_RS08905	0.20	-1.1
1,643,152	-		MMJJ_RS08905	0.22	+4.2
1,643,164	-		MMJJ_RS08905	0.23	-0.8
1,643,164	-		MMJJ_RS08905	0.23	+0.3
1,643,324	+		MMJJ_RS08905	0.36	+1.4
1,643,408	-		MMJJ_RS08905	0.43	-0.9
1,643,409	+		MMJJ_RS08905	0.43	-1.0
1,643,414	+		MMJJ_RS08905	0.44	+0.5
1,643,416	-		MMJJ_RS08905	0.44	-1.1
1,643,486	-		MMJJ_RS08905	0.50	+1.1
1,643,496	-		MMJJ_RS08905	0.50	-0.9
1,643,496	-		MMJJ_RS08905	0.50	-0.1
1,643,687	+		MMJJ_RS08905	0.66	-0.1
1,643,687	+		MMJJ_RS08905	0.66	-0.4
1,643,687	+		MMJJ_RS08905	0.66	+0.0
1,643,719	-		MMJJ_RS08905	0.69	-1.8
1,643,750	-		MMJJ_RS08905	0.72	-1.1
1,643,750	-		MMJJ_RS08905	0.72	+1.1
1,643,751	+		MMJJ_RS08905	0.72	+0.2
1,643,792	-		MMJJ_RS08905	0.75	+0.0