Strain Fitness in Pantoea sp. MT58 around IAI47_21825

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
113,595	+		IAI47_21820	0.48	+0.9
113,716	+		IAI47_21820	0.54	+1.1
113,717	-		IAI47_21820	0.55	+0.8
113,731	+		IAI47_21820	0.55	-1.8
113,781	+		IAI47_21820	0.58	+0.5
113,781	+		IAI47_21820	0.58	+0.1
113,782	-		IAI47_21820	0.58	-0.4
113,799	+		IAI47_21820	0.59	-0.2
113,800	-		IAI47_21820	0.59	+1.2
113,800	-		IAI47_21820	0.59	+0.8
113,810	+		IAI47_21820	0.60	+1.0
113,810	+		IAI47_21820	0.60	-0.4
113,810	+		IAI47_21820	0.60	-0.3
113,811	-		IAI47_21820	0.60	+0.3
113,811	-		IAI47_21820	0.60	-1.3
113,818	+		IAI47_21820	0.60	-0.8
113,819	-		IAI47_21820	0.60	+0.9
113,950	-		IAI47_21820	0.68	+0.8
113,950	-		IAI47_21820	0.68	+0.2
113,950	-		IAI47_21820	0.68	+1.8
113,999	-		IAI47_21820	0.70	+1.8
114,005	+		IAI47_21820	0.71	+3.2
114,005	+		IAI47_21820	0.71	+0.2
114,005	+		IAI47_21820	0.71	+1.1
114,005	+		IAI47_21820	0.71	+0.5
114,005	+		IAI47_21820	0.71	+0.1
114,005	+		IAI47_21820	0.71	+0.5
114,005	+		IAI47_21820	0.71	+0.9
114,005	+		IAI47_21820	0.71	+1.0
114,005	+		IAI47_21820	0.71	-1.0
114,005	+		IAI47_21820	0.71	+0.5
114,005	+		IAI47_21820	0.71	+0.1
114,005	+		IAI47_21820	0.71	-1.9
114,005	+		IAI47_21820	0.71	+0.5
114,005	+		IAI47_21820	0.71	+0.3
114,005	+		IAI47_21820	0.71	-0.4
114,005	+		IAI47_21820	0.71	+0.2
114,005	+		IAI47_21820	0.71	+0.0
114,005	+		IAI47_21820	0.71	-1.0
114,006	-		IAI47_21820	0.71	-0.5
114,006	-		IAI47_21820	0.71	+0.3
114,006	-		IAI47_21820	0.71	-1.2
114,006	-		IAI47_21820	0.71	+1.2
114,006	-		IAI47_21820	0.71	-0.9
114,006	-		IAI47_21820	0.71	+0.5
114,006	-		IAI47_21820	0.71	+1.6
114,006	-		IAI47_21820	0.71	-0.4
114,006	-		IAI47_21820	0.71	-0.4
114,006	-		IAI47_21820	0.71	-0.9
114,006	-		IAI47_21820	0.71	-0.5
114,006	-		IAI47_21820	0.71	+0.4
114,006	-		IAI47_21820	0.71	-1.5
114,006	-		IAI47_21820	0.71	+1.0
114,006	-		IAI47_21820	0.71	+1.4
114,006	-		IAI47_21820	0.71	-0.1
114,006	-		IAI47_21820	0.71	-2.8
114,007	+		IAI47_21820	0.71	+0.2
114,007	+		IAI47_21820	0.71	-1.4
114,007	+		IAI47_21820	0.71	+0.4
114,007	+		IAI47_21820	0.71	+0.6
114,007	+		IAI47_21820	0.71	+0.6
114,007	+		IAI47_21820	0.71	-1.1
114,007	+		IAI47_21820	0.71	-0.2
114,008	-		IAI47_21820	0.71	+0.1
114,008	-		IAI47_21820	0.71	+0.3
114,008	-		IAI47_21820	0.71	+0.5
114,008	-		IAI47_21820	0.71	-1.0
114,008	-		IAI47_21820	0.71	-0.4
114,009	+		IAI47_21820	0.71	+0.2
114,009	+		IAI47_21820	0.71	-0.4
114,009	+		IAI47_21820	0.71	+0.9
114,009	+		IAI47_21820	0.71	+0.8
114,009	+		IAI47_21820	0.71	+0.2
114,009	+		IAI47_21820	0.71	-1.2
114,009	+		IAI47_21820	0.71	+0.9
114,009	+		IAI47_21820	0.71	-0.7
114,009	+		IAI47_21820	0.71	-1.7
114,009	+		IAI47_21820	0.71	-0.5
114,009	+		IAI47_21820	0.71	-2.2
114,009	+		IAI47_21820	0.71	+1.5
114,009	+		IAI47_21820	0.71	+0.0
114,009	+		IAI47_21820	0.71	+3.3
114,009	+		IAI47_21820	0.71	-0.8
114,009	+		IAI47_21820	0.71	-0.3
114,009	+		IAI47_21820	0.71	+0.8
114,009	+		IAI47_21820	0.71	+1.6
114,010	-		IAI47_21820	0.71	+0.7
114,010	-		IAI47_21820	0.71	+1.2
114,010	-		IAI47_21820	0.71	+1.1
114,010	-		IAI47_21820	0.71	-0.2
114,010	-		IAI47_21820	0.71	+0.3
114,010	-		IAI47_21820	0.71	-0.9
114,010	-		IAI47_21820	0.71	-0.7
114,010	-		IAI47_21820	0.71	+0.0
114,010	-		IAI47_21820	0.71	+1.1
114,010	-		IAI47_21820	0.71	-0.4
114,010	-		IAI47_21820	0.71	+3.0
114,010	-		IAI47_21820	0.71	-2.7
114,010	-		IAI47_21820	0.71	+4.2
114,010	-		IAI47_21820	0.71	+0.8
114,010	-		IAI47_21820	0.71	-0.4
114,010	-		IAI47_21820	0.71	+0.4
114,010	-		IAI47_21820	0.71	+0.8
114,028	+		IAI47_21820	0.72	-1.2
114,028	+		IAI47_21820	0.72	-0.5
114,028	+		IAI47_21820	0.72	+0.1
114,028	+		IAI47_21820	0.72	-0.2
114,028	+		IAI47_21820	0.72	+1.3
114,029	-		IAI47_21820	0.72	-0.1
114,029	-		IAI47_21820	0.72	+0.1
114,029	-		IAI47_21820	0.72	+1.5
114,041	-		IAI47_21820	0.73	+0.1
114,057	+		IAI47_21820	0.74	-1.5
114,058	-		IAI47_21820	0.74	+1.4
114,058	-		IAI47_21820	0.74	+0.3
114,058	-		IAI47_21820	0.74	+2.1
114,058	-		IAI47_21820	0.74	-1.5
114,168	+		IAI47_21820	0.80	-1.0
114,169	-		IAI47_21820	0.80	+0.7
114,169	-		IAI47_21820	0.80	+2.4
114,169	-		IAI47_21820	0.80	-1.2
114,169	-		IAI47_21820	0.80	+0.2
114,187	+		IAI47_21820	0.81	+1.3
114,187	+		IAI47_21820	0.81	+0.8
114,187	+		IAI47_21820	0.81	-0.1
114,187	+		IAI47_21820	0.81	+0.5
114,187	+		IAI47_21820	0.81	+1.3
114,187	+		IAI47_21820	0.81	+1.6
114,205	+		IAI47_21820	0.82	+0.9
114,209	+		IAI47_21820	0.82	-0.5
114,233	+		IAI47_21820	0.84	-0.7
114,233	+		IAI47_21820	0.84	+1.6
114,234	-		IAI47_21820	0.84	+0.5
114,248	+		IAI47_21820	0.84	+0.5
114,248	+		IAI47_21820	0.84	+0.6
114,248	+		IAI47_21820	0.84	+0.3
114,248	+		IAI47_21820	0.84	+1.6
114,248	+		IAI47_21820	0.84	-1.2
114,273	+		IAI47_21820	0.86	-0.2
114,274	-		IAI47_21820	0.86	+1.2
114,274	-		IAI47_21820	0.86	+0.8
114,274	-		IAI47_21820	0.86	-1.0
114,274	-		IAI47_21820	0.86	-1.1
114,274	-		IAI47_21820	0.86	+0.7
114,343	+		IAI47_21820	0.90	+0.0
114,343	+		IAI47_21820	0.90	-0.3
114,343	+		IAI47_21820	0.90	+0.0
114,344	-		IAI47_21820	0.90	-1.9
114,344	-		IAI47_21820	0.90	+0.5
114,344	-		IAI47_21820	0.90	+0.0
114,344	-		IAI47_21820	0.90	+1.4
114,344	-		IAI47_21820	0.90	-0.8
114,346	+		IAI47_21820	0.90	-1.3
114,346	+		IAI47_21820	0.90	-0.5
114,346	+		IAI47_21820	0.90	+0.6
114,347	-		IAI47_21820	0.90	-0.6
114,358	+				-0.4
114,358	+				+1.6
114,358	+				+2.6
114,358	+				+2.6
114,358	+				+1.5
114,359	-				-0.1
114,359	-				-1.1
114,359	-				-2.8
114,359	-				+0.9
114,371	+				-0.2
114,510	+				+0.6
114,524	+				-0.2
114,524	+				-0.8
114,525	-				+0.2
114,525	-				+0.9
114,525	-				+0.1
114,553	-				+0.1
114,553	-				+0.6
114,607	+				-1.6
114,630	+				+2.0
114,630	+				+0.3
114,653	+				+1.0
114,653	+				-0.9
114,707	+				-0.1
114,708	-				-0.2
114,708	-				-1.5
114,708	-				+1.3
114,708	-				+0.6
114,708	-				-0.7
114,793	+		IAI47_21825	0.15	+2.2
114,793	+		IAI47_21825	0.15	-0.2
114,793	+		IAI47_21825	0.15	-0.9
114,793	+		IAI47_21825	0.15	+2.5
114,793	+		IAI47_21825	0.15	+0.6
114,814	+		IAI47_21825	0.17	-0.3
114,814	+		IAI47_21825	0.17	+1.0
114,815	-		IAI47_21825	0.17	+0.2
114,918	+		IAI47_21825	0.23	+0.3
114,918	+		IAI47_21825	0.23	-1.5
114,918	+		IAI47_21825	0.23	+1.0
114,919	-		IAI47_21825	0.23	+0.8
114,919	-		IAI47_21825	0.23	+0.0
114,919	-		IAI47_21825	0.23	+0.7
114,919	-		IAI47_21825	0.23	-1.1
114,929	+		IAI47_21825	0.24	+1.6
114,930	-		IAI47_21825	0.24	-1.1
114,930	-		IAI47_21825	0.24	-1.1
114,938	-		IAI47_21825	0.24	+1.6
114,938	-		IAI47_21825	0.24	+0.5
114,938	-		IAI47_21825	0.24	-0.9
114,938	-		IAI47_21825	0.24	-1.1
114,949	+		IAI47_21825	0.25	+1.6
114,949	+		IAI47_21825	0.25	+0.4
115,002	-		IAI47_21825	0.28	+0.8
115,002	-		IAI47_21825	0.28	-0.7
115,103	+		IAI47_21825	0.35	-1.1
115,104	-		IAI47_21825	0.35	+1.6
115,115	-		IAI47_21825	0.36	+0.4
115,115	-		IAI47_21825	0.36	-0.2
115,115	-		IAI47_21825	0.36	+1.6
115,132	-		IAI47_21825	0.37	+0.4
115,132	-		IAI47_21825	0.37	-0.1
115,132	-		IAI47_21825	0.37	-1.0
115,135	-		IAI47_21825	0.37	+1.6
115,135	-		IAI47_21825	0.37	+0.3
115,144	+		IAI47_21825	0.37	+1.5
115,145	-		IAI47_21825	0.38	+2.4
115,193	+		IAI47_21825	0.41	-2.1
115,237	+		IAI47_21825	0.43	+0.4
115,237	+		IAI47_21825	0.43	+1.0
115,246	+		IAI47_21825	0.44	-0.0
115,247	-		IAI47_21825	0.44	+0.3
115,267	+		IAI47_21825	0.45	-1.2
115,267	+		IAI47_21825	0.45	+0.5
115,267	+		IAI47_21825	0.45	-1.1
115,267	+		IAI47_21825	0.45	+0.2
115,267	+		IAI47_21825	0.45	+0.9
115,267	+		IAI47_21825	0.45	+0.1
115,268	-		IAI47_21825	0.45	+1.5
115,268	-		IAI47_21825	0.45	-1.4
115,315	+		IAI47_21825	0.48	+0.6
115,316	-		IAI47_21825	0.48	+0.8
115,316	-		IAI47_21825	0.48	+2.2
115,345	+		IAI47_21825	0.50	-0.1
115,346	-		IAI47_21825	0.50	-1.5
115,349	+		IAI47_21825	0.50	-0.2
115,349	+		IAI47_21825	0.50	+2.4
115,349	+		IAI47_21825	0.50	-0.8
115,350	-		IAI47_21825	0.50	+0.6
115,350	-		IAI47_21825	0.50	-0.0
115,381	-		IAI47_21825	0.52	+0.8
115,392	+		IAI47_21825	0.53	-0.1
115,392	+		IAI47_21825	0.53	+0.0
115,392	+		IAI47_21825	0.53	+1.4
115,393	-		IAI47_21825	0.53	+0.6
115,393	-		IAI47_21825	0.53	+1.2
115,393	-		IAI47_21825	0.53	-0.1
115,393	-		IAI47_21825	0.53	+2.0
115,393	-		IAI47_21825	0.53	-0.9
115,465	+		IAI47_21825	0.58	+1.2
115,465	+		IAI47_21825	0.58	+1.7
115,465	+		IAI47_21825	0.58	+0.9
115,465	+		IAI47_21825	0.58	+0.5
115,466	-		IAI47_21825	0.58	-2.0
115,558	-		IAI47_21825	0.64	-1.4
115,558	-		IAI47_21825	0.64	+2.2
115,605	+		IAI47_21825	0.67	-0.1
115,605	+		IAI47_21825	0.67	-0.3
115,605	+		IAI47_21825	0.67	-0.9
115,605	+		IAI47_21825	0.67	-0.6
115,606	-		IAI47_21825	0.67	+1.1
115,606	-		IAI47_21825	0.67	+1.7
115,606	-		IAI47_21825	0.67	-0.7
115,619	+		IAI47_21825	0.67	-0.9
115,619	+		IAI47_21825	0.67	+2.9
115,619	+		IAI47_21825	0.67	+0.3
115,619	+		IAI47_21825	0.67	+0.6
115,619	+		IAI47_21825	0.67	-0.8
115,619	+		IAI47_21825	0.67	+0.4
115,619	+		IAI47_21825	0.67	+0.6
115,619	+		IAI47_21825	0.67	-0.0
115,619	+		IAI47_21825	0.67	-0.5
115,619	+		IAI47_21825	0.67	-0.2
115,619	+		IAI47_21825	0.67	-0.8
115,619	+		IAI47_21825	0.67	-0.7
115,619	+		IAI47_21825	0.67	+1.0
115,619	+		IAI47_21825	0.67	-0.0
115,619	+		IAI47_21825	0.67	+0.1
115,619	+		IAI47_21825	0.67	-1.7
115,619	+		IAI47_21825	0.67	+0.2
115,619	+		IAI47_21825	0.67	+1.2
115,619	+		IAI47_21825	0.67	+1.0
115,619	+		IAI47_21825	0.67	+1.6
115,619	+		IAI47_21825	0.67	+1.0
115,619	+		IAI47_21825	0.67	+1.9
115,619	+		IAI47_21825	0.67	-0.2
115,619	+		IAI47_21825	0.67	+1.6
115,619	+		IAI47_21825	0.67	+0.1
115,619	+		IAI47_21825	0.67	+2.0
115,619	+		IAI47_21825	0.67	-0.5
115,619	+		IAI47_21825	0.67	+1.2
115,619	+		IAI47_21825	0.67	+1.1
115,619	+		IAI47_21825	0.67	+1.5
115,620	-		IAI47_21825	0.67	+1.3
115,620	-		IAI47_21825	0.67	+0.6
115,620	-		IAI47_21825	0.67	+0.8
115,620	-		IAI47_21825	0.67	-1.1
115,620	-		IAI47_21825	0.67	-0.7
115,620	-		IAI47_21825	0.67	+1.0
115,620	-		IAI47_21825	0.67	+1.1
115,620	-		IAI47_21825	0.67	-0.4
115,620	-				+0.3
115,620	-		IAI47_21825	0.67	+0.8
115,620	-		IAI47_21825	0.67	+0.3
115,620	-		IAI47_21825	0.67	+2.2
115,620	-		IAI47_21825	0.67	-0.4
115,620	-		IAI47_21825	0.67	+0.3
115,620	-		IAI47_21825	0.67	-3.1
115,620	-		IAI47_21825	0.67	+0.7
115,620	-		IAI47_21825	0.67	+0.7
115,620	-		IAI47_21825	0.67	+1.9
115,620	-		IAI47_21825	0.67	+2.0
115,620	-		IAI47_21825	0.67	-0.7
115,620	-		IAI47_21825	0.67	+3.4
115,620	-		IAI47_21825	0.67	+1.5
115,623	+		IAI47_21825	0.68	+1.0
115,623	+		IAI47_21825	0.68	-0.2
115,623	+				+0.5
115,624	-		IAI47_21825	0.68	-0.5
115,624	-		IAI47_21825	0.68	+1.0
115,677	+		IAI47_21825	0.71	-0.8
115,677	+		IAI47_21825	0.71	+0.6
115,677	+		IAI47_21825	0.71	-0.3
115,677	+		IAI47_21825	0.71	-0.6
115,677	+		IAI47_21825	0.71	-0.7
115,677	+		IAI47_21825	0.71	+0.6
115,677	+		IAI47_21825	0.71	-0.1
115,677	+		IAI47_21825	0.71	+0.3
115,677	+		IAI47_21825	0.71	-0.2
115,678	-		IAI47_21825	0.71	-0.5
115,678	-		IAI47_21825	0.71	-0.7
115,678	-		IAI47_21825	0.71	-2.3
115,678	-		IAI47_21825	0.71	+2.8
115,678	-		IAI47_21825	0.71	+1.0
115,678	-		IAI47_21825	0.71	-1.8
115,678	-		IAI47_21825	0.71	+0.6
115,678	-		IAI47_21825	0.71	-1.3
115,678	-		IAI47_21825	0.71	-1.8
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