Strain Fitness in Pantoea sp. MT58 around IAI47_19405

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
106,555	+		IAI47_19395	0.86	-0.1
106,555	+		IAI47_19395	0.86	+1.4
106,555	+		IAI47_19395	0.86	-0.2
106,555	+		IAI47_19395	0.86	+0.4
106,556	-		IAI47_19395	0.86	+0.5
106,556	-		IAI47_19395	0.86	-0.9
106,556	-		IAI47_19395	0.86	-1.2
106,556	-		IAI47_19395	0.86	-0.4
106,564	-		IAI47_19395	0.86	+2.4
106,647	+		IAI47_19395	0.90	+1.3
106,665	+				+0.4
106,665	+				+0.6
106,666	-				-1.6
106,666	-				+0.7
106,681	+				-0.9
106,682	-				+3.1
106,682	-				-1.8
106,682	-				-2.0
106,682	-				-0.7
106,682	-				-0.4
106,704	+				-1.2
106,716	+				+1.1
106,716	+				-1.0
106,716	+				-2.0
106,717	-				-0.3
106,717	-				-1.1
106,717	-				-2.9
106,717	-				-2.0
106,717	-				-0.8
106,755	+				-1.0
106,756	-				-1.2
106,878	+				+0.5
106,999	+				-0.4
106,999	+				+0.5
107,000	-				+2.7
107,048	+		IAI47_19400	0.12	-2.4
107,048	+		IAI47_19400	0.12	+1.8
107,049	-		IAI47_19400	0.12	-0.9
107,049	-		IAI47_19400	0.12	-0.6
107,049	-		IAI47_19400	0.12	-3.0
107,049	-		IAI47_19400	0.12	-0.7
107,090	+		IAI47_19400	0.19	-0.9
107,090	+		IAI47_19400	0.19	+0.4
107,090	+		IAI47_19400	0.19	+0.1
107,090	+		IAI47_19400	0.19	-1.7
107,090	+		IAI47_19400	0.19	+0.2
107,090	+		IAI47_19400	0.19	+1.5
107,090	+		IAI47_19400	0.19	-0.8
107,091	-		IAI47_19400	0.20	-0.1
107,185	+		IAI47_19400	0.36	+0.7
107,186	-		IAI47_19400	0.36	+1.4
107,186	-		IAI47_19400	0.36	-0.2
107,195	+		IAI47_19400	0.38	-1.0
107,196	-		IAI47_19400	0.38	-0.8
107,196	-		IAI47_19400	0.38	+0.1
107,250	+		IAI47_19400	0.48	-0.4
107,251	-		IAI47_19400	0.48	+0.6
107,304	+		IAI47_19400	0.57	+1.7
107,305	-		IAI47_19400	0.57	-0.7
107,527	+				-1.1
107,527	+				+0.2
107,528	-				+1.1
107,528	-				+0.8
107,531	-				+0.4
107,547	+				+0.2
107,547	+				+1.0
107,548	-				+0.1
107,584	+				+2.4
107,584	+				-1.8
107,584	+				+0.6
107,585	-				-1.7
107,617	+				-0.1
107,630	-				+1.5
107,630	-				-2.0
107,633	+				+1.7
107,633	+				+1.7
107,633	+				+1.0
107,633	+				-1.4
107,633	+				-0.4
107,633	+				-0.3
107,633	+				-0.2
107,633	+				-1.1
107,633	+				+0.4
107,633	+				+0.6
107,633	+				+0.7
107,633	+				+1.8
107,634	-				+0.8
107,634	-				+0.8
107,634	-				+0.8
107,634	-				+0.1
107,634	-				-0.4
107,634	-				+3.2
107,634	-				+1.4
107,691	-		IAI47_19405	0.15	-1.2
107,691	-		IAI47_19405	0.15	-2.6
107,718	+		IAI47_19405	0.18	+1.6
107,718	+		IAI47_19405	0.18	-1.3
107,718	+		IAI47_19405	0.18	-1.3
107,718	+		IAI47_19405	0.18	-1.2
107,718	+		IAI47_19405	0.18	+0.7
107,718	+		IAI47_19405	0.18	+0.5
107,718	+		IAI47_19405	0.18	+1.1
107,718	+		IAI47_19405	0.18	+2.0
107,719	-		IAI47_19405	0.18	+0.6
107,719	-		IAI47_19405	0.18	+0.4
107,719	-		IAI47_19405	0.18	-2.4
107,783	+		IAI47_19405	0.24	+0.2
107,784	-		IAI47_19405	0.24	+0.8
107,813	-		IAI47_19405	0.27	-2.4
107,813	-		IAI47_19405	0.27	-2.3
107,813	-		IAI47_19405	0.27	-0.7
107,852	+		IAI47_19405	0.31	-0.8
107,852	+		IAI47_19405	0.31	+1.3
107,852	+		IAI47_19405	0.31	+1.1
107,873	-		IAI47_19405	0.34	-0.0
107,937	+		IAI47_19405	0.40	-0.6
107,937	+		IAI47_19405	0.40	+1.8
107,937	+		IAI47_19405	0.40	-0.3
107,968	+		IAI47_19405	0.43	-1.6
107,969	-		IAI47_19405	0.43	-1.2
108,062	+		IAI47_19405	0.53	-0.7
108,077	+		IAI47_19405	0.54	-0.2
108,077	+		IAI47_19405	0.54	-0.9
108,077	+		IAI47_19405	0.54	-1.2
108,077	+		IAI47_19405	0.54	+1.5
108,077	+		IAI47_19405	0.54	-1.0
108,077	+		IAI47_19405	0.54	+1.4
108,078	-		IAI47_19405	0.54	+0.2
108,078	-		IAI47_19405	0.54	-0.2
108,078	-		IAI47_19405	0.54	+1.1
108,078	-		IAI47_19405	0.54	+1.4
108,323	+		IAI47_19405	0.79	-1.6
108,323	+		IAI47_19405	0.79	+0.4
108,323	+		IAI47_19405	0.79	+0.6
108,323	+		IAI47_19405	0.79	+0.9
108,323	+		IAI47_19405	0.79	-0.0
108,323	+		IAI47_19405	0.79	+2.4
108,323	+		IAI47_19405	0.79	+0.5
108,323	+		IAI47_19405	0.79	-1.9
108,323	+		IAI47_19405	0.79	-0.4
108,324	-		IAI47_19405	0.79	-0.5
108,324	-		IAI47_19405	0.79	-0.6
108,324	-		IAI47_19405	0.79	+2.4
108,324	-		IAI47_19405	0.79	-1.4
108,324	-		IAI47_19405	0.79	-0.1
108,324	-		IAI47_19405	0.79	+0.8
108,324	-		IAI47_19405	0.79	+0.3
108,325	+		IAI47_19405	0.79	-0.3
108,331	+		IAI47_19405	0.80	-1.2
108,332	-		IAI47_19405	0.80	-0.6
108,487	+				-0.8
108,488	-				+0.7
108,556	-				-0.2
108,561	+				-1.1
108,561	+				+2.5
108,561	+				+0.2
108,561	+				-0.2
108,561	+				-0.3
108,561	+				+1.5
108,562	-				+0.2
108,562	-				+1.6
108,562	-				-0.4
108,608	+				+2.0
108,608	+				+0.6
108,609	-				+0.2
108,648	+		IAI47_19410	0.12	+1.4
108,677	+		IAI47_19410	0.15	-0.7
108,678	-		IAI47_19410	0.15	-2.8
108,678	-		IAI47_19410	0.15	-0.9
108,678	-		IAI47_19410	0.15	-0.1
108,680	+		IAI47_19410	0.15	-0.7
108,680	+		IAI47_19410	0.15	-1.0
108,680	+		IAI47_19410	0.15	-0.1
108,680	+		IAI47_19410	0.15	-1.2
108,680	+		IAI47_19410	0.15	-0.2
108,681	-		IAI47_19410	0.15	-0.8
108,681	-		IAI47_19410	0.15	+0.9
108,681	-		IAI47_19410	0.15	+1.2
108,681	-		IAI47_19410	0.15	-0.5
108,699	+		IAI47_19410	0.17	+1.1
108,715	+		IAI47_19410	0.18	+0.9
108,715	+		IAI47_19410	0.18	-1.1
108,716	-		IAI47_19410	0.18	+0.0
108,769	+		IAI47_19410	0.23	-0.8
108,770	-		IAI47_19410	0.23	+1.6
108,770	-		IAI47_19410	0.23	-0.3
108,770	-		IAI47_19410	0.23	-1.7
108,866	-		IAI47_19410	0.32	+0.6
108,873	+		IAI47_19410	0.33	-1.0
108,873	+		IAI47_19410	0.33	+1.8
108,874	-		IAI47_19410	0.33	+1.4
108,948	-		IAI47_19410	0.40	+1.4
109,111	-		IAI47_19410	0.54	+0.2
109,111	-		IAI47_19410	0.54	-1.0
109,120	+		IAI47_19410	0.55	+2.0
109,120	+		IAI47_19410	0.55	+1.6
109,151	+		IAI47_19410	0.58	+2.0
109,152	-		IAI47_19410	0.58	+0.2
109,152	-		IAI47_19410	0.58	-0.8
109,163	+		IAI47_19410	0.59	-0.4
109,163	+		IAI47_19410	0.59	-0.7
109,163	+		IAI47_19410	0.59	-0.0
109,164	-		IAI47_19410	0.59	+1.9
109,190	+		IAI47_19410	0.62	+2.1
109,257	-		IAI47_19410	0.68	+0.8
109,373	-		IAI47_19410	0.78	-2.7
109,373	-		IAI47_19410	0.78	-0.7
109,426	-		IAI47_19410	0.83	-0.8
109,426	-		IAI47_19410	0.83	+0.0
109,456	+		IAI47_19410	0.86	+1.0
109,457	-		IAI47_19410	0.86	-1.0
109,457	-		IAI47_19410	0.86	-0.9
109,526	-				+0.0
109,526	-				-1.2
109,526	-				-1.1