Strain Fitness in Pantoea sp. MT58 around IAI47_13430

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,850,067	+		IAI47_13425	0.26	-0.2
2,850,068	-		IAI47_13425	0.26	+0.4
2,850,068	-		IAI47_13425	0.26	-0.6
2,850,068	-		IAI47_13425	0.26	-0.9
2,850,068	-		IAI47_13425	0.26	+1.1
2,850,068	-		IAI47_13425	0.26	+0.6
2,850,105	-		IAI47_13425	0.29	+0.2
2,850,105	-		IAI47_13425	0.29	-1.1
2,850,136	+		IAI47_13425	0.31	+0.9
2,850,136	+		IAI47_13425	0.31	-1.7
2,850,136	+		IAI47_13425	0.31	-0.8
2,850,137	-		IAI47_13425	0.32	-2.2
2,850,137	-		IAI47_13425	0.32	+0.5
2,850,195	+		IAI47_13425	0.36	+1.3
2,850,196	-		IAI47_13425	0.37	-2.4
2,850,235	+		IAI47_13425	0.40	-1.5
2,850,236	-		IAI47_13425	0.40	+0.2
2,850,236	-		IAI47_13425	0.40	-0.0
2,850,236	-		IAI47_13425	0.40	-0.6
2,850,236	-		IAI47_13425	0.40	-0.6
2,850,238	+		IAI47_13425	0.40	-0.0
2,850,238	+		IAI47_13425	0.40	+0.8
2,850,238	+		IAI47_13425	0.40	-1.1
2,850,238	+		IAI47_13425	0.40	+0.5
2,850,238	+		IAI47_13425	0.40	-1.8
2,850,238	+		IAI47_13425	0.40	-0.8
2,850,239	-		IAI47_13425	0.40	+0.2
2,850,239	-		IAI47_13425	0.40	-1.5
2,850,239	-		IAI47_13425	0.40	+0.9
2,850,239	-		IAI47_13425	0.40	+0.8
2,850,239	-		IAI47_13425	0.40	+0.3
2,850,239	-		IAI47_13425	0.40	+3.9
2,850,239	-		IAI47_13425	0.40	-1.0
2,850,239	-		IAI47_13425	0.40	+0.7
2,850,291	+		IAI47_13425	0.45	+0.1
2,850,291	+		IAI47_13425	0.45	+0.6
2,850,292	-		IAI47_13425	0.45	-1.1
2,850,292	-		IAI47_13425	0.45	+0.2
2,850,292	-		IAI47_13425	0.45	-0.6
2,850,292	-		IAI47_13425	0.45	+1.1
2,850,480	+		IAI47_13425	0.60	+1.4
2,850,480	+		IAI47_13425	0.60	-0.2
2,850,481	-		IAI47_13425	0.61	-2.5
2,850,481	-		IAI47_13425	0.61	+0.9
2,850,481	-		IAI47_13425	0.61	+1.4
2,850,481	-		IAI47_13425	0.61	+1.4
2,850,481	-		IAI47_13425	0.61	+1.1
2,850,535	+		IAI47_13425	0.65	-2.4
2,850,536	-		IAI47_13425	0.65	-1.6
2,850,553	+		IAI47_13425	0.67	+1.1
2,850,553	+		IAI47_13425	0.67	+3.0
2,850,554	-		IAI47_13425	0.67	+1.3
2,850,658	+		IAI47_13425	0.75	-2.6
2,850,658	+		IAI47_13425	0.75	-0.5
2,850,771	+		IAI47_13425	0.85	-0.8
2,850,785	-		IAI47_13425	0.86	-0.7
2,850,800	-		IAI47_13425	0.87	-1.1
2,850,843	-				+1.5
2,850,843	-				+0.5
2,850,870	+				+1.5
2,850,870	+				-0.8
2,850,870	+				-2.3
2,850,870	+				-1.7
2,850,870	+				-0.3
2,850,871	-				-1.2
2,850,871	-				-1.4
2,850,871	-				+0.4
2,850,871	-				+0.7
2,850,889	+				-1.6
2,850,889	+				+0.9
2,850,889	+				+0.0
2,850,889	+				-2.0
2,850,889	+				+1.2
2,850,889	+				+0.3
2,850,889	+				-0.8
2,850,890	-				-0.9
2,850,890	-				+0.9
2,850,890	-				+0.6
2,850,890	-				+0.5
2,850,890	-				+0.5
2,850,932	+				+0.5
2,850,933	-				-0.6
2,850,933	-				-0.0
2,850,933	-				-0.7
2,850,949	+				-0.9
2,850,949	+				-0.8
2,850,949	+				+0.4
2,850,949	+				-1.7
2,850,949	+				-1.1
2,850,949	+				-0.5
2,850,949	+				+0.6
2,850,949	+				-1.9
2,850,949	+				-0.1
2,850,950	-				+0.4
2,850,950	-				-1.9
2,850,950	-				-0.7
2,850,950	-				+0.5
2,850,950	-				-0.4
2,850,950	-				-0.5
2,850,950	-				-1.1
2,850,950	-				+0.2
2,850,950	-				-2.1
2,850,950	-				+2.2
2,850,950	-				+1.4
2,850,950	-				-0.6
2,850,950	-				+0.8
2,850,950	-				+0.5
2,850,958	-				-1.4
2,850,963	+				-0.9
2,850,963	+				+1.5
2,850,963	+				-1.2
2,850,964	-				+0.2
2,850,964	-				-0.9
2,850,964	-				+1.1
2,850,982	+				+1.2
2,850,983	-				-0.2
2,850,983	-				-0.2
2,850,983	-				+0.7
2,850,983	-				-0.3
2,850,983	-				-0.4
2,850,984	+				-1.9
2,850,984	+				-0.3
2,850,984	+				-0.0
2,850,985	-				-1.5
2,850,985	-				+0.5
2,850,985	-				+0.4
2,850,985	-				-0.8
2,850,985	-				+1.4
2,850,985	-				+1.2
2,851,033	-				+2.1
2,851,065	-				-0.6
2,851,065	-				+0.3
2,851,101	+				-1.9
2,851,102	-				+0.5
2,851,102	-				-0.1
2,851,121	-		IAI47_13430	0.11	+0.6
2,851,121	-		IAI47_13430	0.11	+2.5
2,851,121	-		IAI47_13430	0.11	-1.3
2,851,168	+		IAI47_13430	0.16	+2.2
2,851,168	+		IAI47_13430	0.16	+0.7
2,851,168	+		IAI47_13430	0.16	-0.4
2,851,169	-		IAI47_13430	0.16	+0.6
2,851,169	-		IAI47_13430	0.16	-0.1
2,851,169	-		IAI47_13430	0.16	+0.1
2,851,169	-		IAI47_13430	0.16	-0.4
2,851,169	-		IAI47_13430	0.16	+0.2
2,851,205	-		IAI47_13430	0.19	+0.8
2,851,205	-		IAI47_13430	0.19	-2.0
2,851,255	+		IAI47_13430	0.25	-0.6
2,851,255	+		IAI47_13430	0.25	-0.6
2,851,255	+		IAI47_13430	0.25	-0.5
2,851,256	-		IAI47_13430	0.25	+3.2
2,851,256	-		IAI47_13430	0.25	-1.3
2,851,308	+		IAI47_13430	0.30	-0.1
2,851,308	+		IAI47_13430	0.30	+1.2
2,851,335	-		IAI47_13430	0.33	-0.9
2,851,335	-		IAI47_13430	0.33	+3.8
2,851,444	+		IAI47_13430	0.45	+1.2
2,851,445	-		IAI47_13430	0.45	+1.2
2,851,557	+		IAI47_13430	0.56	+1.5
2,851,557	+		IAI47_13430	0.56	-0.6
2,851,631	+		IAI47_13430	0.64	-0.3
2,851,631	+		IAI47_13430	0.64	-1.3
2,851,631	+		IAI47_13430	0.64	+2.0
2,851,671	-		IAI47_13430	0.68	+0.6
2,851,772	+		IAI47_13430	0.79	+0.5
2,851,772	+		IAI47_13430	0.79	-1.5
2,851,772	+		IAI47_13430	0.79	-0.9
2,851,773	-		IAI47_13430	0.79	-0.2
2,851,773	-		IAI47_13430	0.79	+1.5
2,851,809	-		IAI47_13430	0.83	+0.6
2,851,831	+		IAI47_13430	0.85	-0.7
2,851,832	-		IAI47_13430	0.85	+0.2
2,851,832	-		IAI47_13430	0.85	-1.4
2,851,855	-		IAI47_13430	0.88	-0.6
2,851,895	-				-2.0
2,851,895	-				-0.1
2,851,960	-				+0.9
2,851,960	-				+0.9
2,851,970	+				-0.6
2,851,970	+				-0.6
2,851,970	+				+1.2
2,851,971	-				+1.9
2,851,971	-				-1.4
2,852,182	+		IAI47_13435	0.15	-0.1
2,852,182	+		IAI47_13435	0.15	+0.2
2,852,183	-		IAI47_13435	0.15	+0.3
2,852,221	-		IAI47_13435	0.18	-0.6
2,852,221	-		IAI47_13435	0.18	-0.9
2,852,270	-		IAI47_13435	0.22	+2.1
2,852,284	+		IAI47_13435	0.23	+1.3
2,852,284	+		IAI47_13435	0.23	-2.1
2,852,284	+		IAI47_13435	0.23	-0.1
2,852,341	+		IAI47_13435	0.27	+0.3
2,852,341	+		IAI47_13435	0.27	-2.8
2,852,350	+		IAI47_13435	0.27	+0.2
2,852,350	+		IAI47_13435	0.27	-0.9
2,852,350	+		IAI47_13435	0.27	-0.5
2,852,351	-		IAI47_13435	0.28	-2.1
2,852,351	-		IAI47_13435	0.28	+0.4
2,852,361	+		IAI47_13435	0.28	-0.5
2,852,361	+		IAI47_13435	0.28	-1.6
2,852,362	-		IAI47_13435	0.28	-0.6
2,852,362	-		IAI47_13435	0.28	+1.0
2,852,362	-		IAI47_13435	0.28	+0.6
2,852,362	-		IAI47_13435	0.28	-0.5
2,852,362	-		IAI47_13435	0.28	+1.1
2,852,362	-		IAI47_13435	0.28	-0.7
2,852,377	+		IAI47_13435	0.29	+0.6
2,852,378	-		IAI47_13435	0.29	+1.1
2,852,389	-		IAI47_13435	0.30	+0.8
2,852,389	-		IAI47_13435	0.30	+0.6
2,852,417	-		IAI47_13435	0.32	-0.6
2,852,494	+		IAI47_13435	0.38	-0.9
2,852,494	+		IAI47_13435	0.38	-1.6
2,852,494	+		IAI47_13435	0.38	+0.5
2,852,494	+		IAI47_13435	0.38	-0.9
2,852,494	+		IAI47_13435	0.38	-0.1
2,852,495	-		IAI47_13435	0.38	-0.4
2,852,495	-		IAI47_13435	0.38	-0.0
2,852,495	-		IAI47_13435	0.38	-0.6
2,852,618	-		IAI47_13435	0.47	+0.1
2,852,618	-		IAI47_13435	0.47	-0.2
2,852,662	+		IAI47_13435	0.50	-0.4
2,852,662	+		IAI47_13435	0.50	+0.6
2,852,662	+		IAI47_13435	0.50	-0.9
2,852,662	+		IAI47_13435	0.50	+0.8
2,852,663	-		IAI47_13435	0.50	-0.5
2,852,663	-		IAI47_13435	0.50	-1.1
2,852,663	-		IAI47_13435	0.50	-0.2
2,852,838	+		IAI47_13435	0.63	-0.6
2,852,839	+		IAI47_13435	0.63	-1.6
2,852,840	-		IAI47_13435	0.63	+0.2
2,852,840	-		IAI47_13435	0.63	-0.2
2,852,848	+		IAI47_13435	0.64	-0.3
2,852,963	+		IAI47_13435	0.72	+1.1
2,852,963	+		IAI47_13435	0.72	+0.2
2,852,963	+		IAI47_13435	0.72	+0.8
2,852,963	+		IAI47_13435	0.72	-2.9
2,852,963	+		IAI47_13435	0.72	-0.6
2,852,963	+		IAI47_13435	0.72	-1.6
2,852,964	-		IAI47_13435	0.72	-0.4
2,852,964	-		IAI47_13435	0.72	-0.3
2,852,964	-		IAI47_13435	0.72	-0.1
2,852,964	-		IAI47_13435	0.72	-1.1
2,852,965	+		IAI47_13435	0.72	-2.3
2,852,965	+		IAI47_13435	0.72	-1.6
2,852,965	+		IAI47_13435	0.72	-0.1
2,852,965	+		IAI47_13435	0.72	-1.6
2,852,965	+		IAI47_13435	0.72	+0.1
2,852,966	-		IAI47_13435	0.72	+1.1
2,852,966	-		IAI47_13435	0.72	-0.9
2,852,966	-		IAI47_13435	0.72	+1.9
2,852,966	-		IAI47_13435	0.72	-0.3
2,852,966	-		IAI47_13435	0.72	-1.0
2,852,966	-		IAI47_13435	0.72	+0.4
2,852,966	-		IAI47_13435	0.72	-0.5