Strain Fitness in Pantoea sp. MT58 around IAI47_13365

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,828,672	+		IAI47_13360	0.38	-0.3
2,828,672	+		IAI47_13360	0.38	-0.6
2,828,673	-		IAI47_13360	0.38	+0.5
2,828,673	-		IAI47_13360	0.38	+1.3
2,828,674	+		IAI47_13360	0.38	+0.5
2,828,695	+		IAI47_13360	0.41	+1.1
2,828,719	-		IAI47_13360	0.43	+0.1
2,828,747	+		IAI47_13360	0.46	-0.6
2,828,747	+		IAI47_13360	0.46	-1.2
2,828,748	-		IAI47_13360	0.46	+2.7
2,828,749	+		IAI47_13360	0.46	+0.6
2,828,749	+		IAI47_13360	0.46	-0.6
2,828,749	+		IAI47_13360	0.46	-2.2
2,828,749	+		IAI47_13360	0.46	+1.7
2,828,749	+		IAI47_13360	0.46	-1.6
2,828,750	-		IAI47_13360	0.47	-0.4
2,828,750	-		IAI47_13360	0.47	-0.4
2,828,750	-		IAI47_13360	0.47	-0.1
2,828,750	-		IAI47_13360	0.47	-2.1
2,828,750	-		IAI47_13360	0.47	+1.4
2,828,750	-		IAI47_13360	0.47	+0.5
2,828,750	-		IAI47_13360	0.47	+0.9
2,828,779	+		IAI47_13360	0.50	+0.3
2,828,779	+		IAI47_13360	0.50	-1.9
2,828,779	+		IAI47_13360	0.50	-2.2
2,828,780	-		IAI47_13360	0.50	+0.5
2,828,780	-		IAI47_13360	0.50	-0.6
2,828,780	-		IAI47_13360	0.50	+1.1
2,828,780	-		IAI47_13360	0.50	-1.0
2,828,780	-		IAI47_13360	0.50	-0.5
2,828,780	-		IAI47_13360	0.50	-1.7
2,828,780	-		IAI47_13360	0.50	-0.2
2,828,780	-		IAI47_13360	0.50	-0.2
2,828,781	+		IAI47_13360	0.50	-2.6
2,828,781	+		IAI47_13360	0.50	-0.7
2,828,781	+		IAI47_13360	0.50	-1.7
2,828,781	+		IAI47_13360	0.50	+1.2
2,828,782	-		IAI47_13360	0.50	-0.1
2,828,782	-		IAI47_13360	0.50	+0.9
2,828,793	+		IAI47_13360	0.51	-0.5
2,828,793	+		IAI47_13360	0.51	-1.0
2,828,793	+		IAI47_13360	0.51	+3.9
2,828,794	-		IAI47_13360	0.51	-1.4
2,828,805	-		IAI47_13360	0.52	+0.7
2,828,813	+		IAI47_13360	0.53	+1.4
2,828,814	-		IAI47_13360	0.53	+0.2
2,828,865	+		IAI47_13360	0.59	+2.2
2,828,865	+		IAI47_13360	0.59	-1.3
2,828,866	-		IAI47_13360	0.59	-0.1
2,828,866	-		IAI47_13360	0.59	+0.0
2,828,867	+		IAI47_13360	0.59	+1.0
2,828,873	+		IAI47_13360	0.60	-0.2
2,828,873	+		IAI47_13360	0.60	-0.6
2,828,874	-		IAI47_13360	0.60	-0.0
2,828,874	-		IAI47_13360	0.60	+0.9
2,828,876	+		IAI47_13360	0.60	-0.8
2,828,876	+		IAI47_13360	0.60	-0.3
2,828,876	+		IAI47_13360	0.60	-1.3
2,828,876	+		IAI47_13360	0.60	-1.6
2,828,876	+		IAI47_13360	0.60	-1.1
2,828,877	-		IAI47_13360	0.60	+0.6
2,828,921	-		IAI47_13360	0.65	-0.9
2,828,940	-		IAI47_13360	0.67	+0.8
2,829,036	+		IAI47_13360	0.77	-0.9
2,829,036	+		IAI47_13360	0.77	+0.8
2,829,036	+		IAI47_13360	0.77	-0.1
2,829,041	+		IAI47_13360	0.78	-0.0
2,829,041	+		IAI47_13360	0.78	+1.0
2,829,041	+		IAI47_13360	0.78	-2.1
2,829,042	-		IAI47_13360	0.78	-0.6
2,829,095	+		IAI47_13360	0.83	+0.0
2,829,095	+		IAI47_13360	0.83	+1.9
2,829,095	+		IAI47_13360	0.83	+1.7
2,829,126	+		IAI47_13360	0.87	+0.2
2,829,126	+		IAI47_13360	0.87	-1.5
2,829,127	-		IAI47_13360	0.87	+1.2
2,829,153	+		IAI47_13360	0.90	-0.9
2,829,153	+		IAI47_13360	0.90	-0.8
2,829,153	+		IAI47_13360	0.90	+0.4
2,829,154	-		IAI47_13360	0.90	+1.0
2,829,179	+				+2.3
2,829,179	+				+0.2
2,829,180	-				+0.3
2,829,180	-				-1.3
2,829,200	-				+0.8
2,829,215	+				+0.7
2,829,215	+				-1.3
2,829,215	+				+0.1
2,829,216	-				-1.6
2,829,216	-				+0.4
2,829,216	-				-0.1
2,829,216	-				-0.2
2,829,216	-				+1.6
2,829,219	+				+1.5
2,829,220	-				-0.5
2,829,267	-				+0.2
2,829,280	+				+0.6
2,829,280	+				-1.2
2,829,280	+				+0.1
2,829,280	+				-3.4
2,829,280	+				+0.4
2,829,284	+				+0.8
2,829,284	+				-0.8
2,829,284	+				+0.0
2,829,284	+				+2.1
2,829,285	-				-0.3
2,829,285	-				-1.5
2,829,287	+				-1.9
2,829,287	+				+1.3
2,829,287	+				-0.1
2,829,287	+				-2.2
2,829,287	+				-0.2
2,829,287	+				+0.8
2,829,288	-				+1.7
2,829,288	-				+2.8
2,829,288	-				+0.8
2,829,288	-				-0.6
2,829,290	-				+0.9
2,829,314	+				+0.1
2,829,314	+				+1.4
2,829,315	-				+0.0
2,829,315	-				+0.4
2,829,351	+				-0.4
2,829,352	-				+1.6
2,829,368	+				+0.3
2,829,375	+				+0.9
2,829,376	-				+0.1
2,829,376	-				-0.6
2,829,376	-				+2.8
2,829,413	+				-0.5
2,829,414	-				+1.5
2,829,414	-				+1.5
2,829,423	+				+0.9
2,829,424	-				-0.5
2,829,431	+				+1.1
2,829,431	+				-0.6
2,829,431	+				+0.0
2,829,432	-				+0.4
2,829,457	+				-0.4
2,829,457	+				+0.3
2,829,457	+				+1.4
2,829,458	-				-0.1
2,829,458	-				+0.2
2,829,459	+				-1.6
2,829,459	+				-0.3
2,829,459	+				+0.8
2,829,460	-				+0.6
2,829,460	-				-0.8
2,829,473	+				-0.2
2,829,473	+				+0.9
2,829,474	-				+0.8
2,829,474	-				+0.2
2,829,474	-				-0.9
2,829,474	-				+0.9
2,829,474	-				+1.2
2,829,494	+				+1.6
2,829,494	+				-0.6
2,829,495	-				-2.1
2,829,495	-				-0.3
2,829,495	-				+0.5
2,829,495	-				+1.0
2,829,495	-				-1.4
2,829,552	-				+0.5
2,829,563	+				+1.5
2,829,563	+				+0.7
2,829,563	+				+1.2
2,829,564	-				+0.4
2,829,564	-				+1.1
2,829,569	+				-0.6
2,829,569	+				-0.1
2,829,570	-				+1.6
2,829,570	-				-2.1
2,829,570	-				+0.6
2,829,575	+				+0.1
2,829,575	+				+2.5
2,829,576	-				+0.2
2,829,598	-				-2.6
2,829,598	-				+0.4
2,829,606	-				+0.9
2,829,612	+				-0.5
2,829,612	+				-1.3
2,829,613	-				+1.5
2,829,625	+				-1.2
2,829,625	+				+0.9
2,829,625	+				-0.6
2,829,625	+				-0.2
2,829,626	-				-0.3
2,829,629	+				-0.9
2,829,640	+				-0.0
2,829,746	+				+0.2
2,829,747	-				+0.1
2,829,747	-				-0.0
2,829,791	+		IAI47_13365	0.15	+1.7
2,829,918	-		IAI47_13365	0.29	-2.5
2,829,958	+		IAI47_13365	0.34	+0.5
2,829,959	-		IAI47_13365	0.34	-0.2
2,829,959	-		IAI47_13365	0.34	+0.3
2,830,033	+		IAI47_13365	0.43	+0.2
2,830,033	+		IAI47_13365	0.43	+0.1
2,830,036	+		IAI47_13365	0.43	-0.2
2,830,036	+		IAI47_13365	0.43	+0.3
2,830,036	+		IAI47_13365	0.43	+2.9
2,830,036	+		IAI47_13365	0.43	-0.7
2,830,037	-		IAI47_13365	0.43	+1.5
2,830,037	-		IAI47_13365	0.43	+1.3
2,830,037	-		IAI47_13365	0.43	-1.9
2,830,037	-		IAI47_13365	0.43	+1.9
2,830,037	-		IAI47_13365	0.43	+0.8
2,830,075	+		IAI47_13365	0.47	+1.2
2,830,153	+		IAI47_13365	0.56	+3.4
2,830,154	-		IAI47_13365	0.56	-1.2
2,830,154	-		IAI47_13365	0.56	-0.3
2,830,154	-		IAI47_13365	0.56	-0.1
2,830,243	+		IAI47_13365	0.67	-0.3
2,830,243	+		IAI47_13365	0.67	+0.9
2,830,244	-		IAI47_13365	0.67	+2.3
2,830,260	-		IAI47_13365	0.68	+1.3
2,830,292	+		IAI47_13365	0.72	+0.1
2,830,292	+		IAI47_13365	0.72	-1.6
2,830,292	+		IAI47_13365	0.72	+0.4
2,830,292	+		IAI47_13365	0.72	+0.9
2,830,292	+		IAI47_13365	0.72	+1.3
2,830,292	+		IAI47_13365	0.72	+0.4
2,830,292	+		IAI47_13365	0.72	+0.6
2,830,293	-		IAI47_13365	0.72	-2.8
2,830,293	-		IAI47_13365	0.72	+0.4
2,830,293	-		IAI47_13365	0.72	+1.5
2,830,293	-		IAI47_13365	0.72	+0.7
2,830,433	-		IAI47_13365	0.88	+0.7
2,830,433	-		IAI47_13365	0.88	+1.6
2,830,433	-		IAI47_13365	0.88	+0.2
2,830,433	-		IAI47_13365	0.88	-0.8
2,830,529	+				-0.2
2,830,535	+				-1.1
2,830,548	-				+1.6
2,830,554	+				-0.3
2,830,554	+				-1.9
2,830,571	+				-0.5
2,830,571	+				+0.2
2,830,634	-				+2.2
2,830,639	+				+1.3
2,830,639	+				-0.9
2,830,639	+				+0.4
2,830,639	+				-0.9
2,830,640	-				+1.4
2,830,640	-				+0.3
2,830,662	-				+1.9
2,830,662	-				+4.6
2,830,662	-				-0.0
2,830,740	-				+0.8
2,830,760	+				-0.8
2,830,760	+				+0.2
2,830,760	+				-0.8
2,830,761	-				+1.0
2,830,761	-				+1.6
2,830,838	+				+1.3
2,830,838	+				-1.4
2,830,839	-				+2.3
2,830,839	-				-0.3
2,830,839	-				+0.7
2,830,839	-				+0.0
2,830,861	+				-0.2
2,830,861	+				+0.9
2,830,861	+				-0.5
2,830,861	+				+1.2
2,830,862	-		IAI47_13370	0.10	-0.5
2,830,862	-		IAI47_13370	0.10	+1.8
2,830,893	-		IAI47_13370	0.11	-0.1
2,830,893	-		IAI47_13370	0.11	-0.6
2,830,901	+		IAI47_13370	0.12	+0.9
2,830,901	+		IAI47_13370	0.12	-0.5
2,830,901	+		IAI47_13370	0.12	+0.2
2,830,901	+		IAI47_13370	0.12	+0.4
2,830,901	+		IAI47_13370	0.12	+1.1
2,830,901	+		IAI47_13370	0.12	-0.8
2,830,901	+		IAI47_13370	0.12	+0.6
2,830,901	+		IAI47_13370	0.12	+0.8
2,830,902	-		IAI47_13370	0.12	-0.8
2,830,902	-		IAI47_13370	0.12	-0.2
2,830,902	-		IAI47_13370	0.12	-0.6
2,830,902	-		IAI47_13370	0.12	-1.6
2,830,905	+		IAI47_13370	0.12	-0.2
2,830,905	+		IAI47_13370	0.12	+0.1
2,830,905	+		IAI47_13370	0.12	-0.3
2,830,905	+		IAI47_13370	0.12	-0.5
2,830,911	+		IAI47_13370	0.12	+1.1
2,830,911	+		IAI47_13370	0.12	+0.8
2,830,912	-		IAI47_13370	0.12	-3.2
2,830,922	+		IAI47_13370	0.13	-0.7
2,830,934	+		IAI47_13370	0.13	+0.9
2,830,934	+		IAI47_13370	0.13	+2.2
2,830,935	-		IAI47_13370	0.13	+0.0
2,830,986	-		IAI47_13370	0.15	-1.3
2,830,986	-		IAI47_13370	0.15	-2.1
2,830,987	+		IAI47_13370	0.15	-0.9
2,830,987	+		IAI47_13370	0.15	-0.5
2,830,987	+		IAI47_13370	0.15	-0.3
2,830,987	+		IAI47_13370	0.15	+0.9
2,830,987	+		IAI47_13370	0.15	+0.2
2,830,987	+		IAI47_13370	0.15	-1.2
2,830,988	-		IAI47_13370	0.15	+2.4
2,830,988	-		IAI47_13370	0.15	-0.9
2,830,988	-		IAI47_13370	0.15	-0.4
2,830,988	-		IAI47_13370	0.15	-2.5
2,830,988	-		IAI47_13370	0.15	+0.5
2,831,011	+		IAI47_13370	0.16	-0.1
2,831,012	-		IAI47_13370	0.17	+1.7
2,831,035	+		IAI47_13370	0.18	-1.3
2,831,035	+		IAI47_13370	0.18	-0.3
2,831,035	+		IAI47_13370	0.18	-1.4
2,831,035	+		IAI47_13370	0.18	+0.8
2,831,035	+		IAI47_13370	0.18	+0.9
2,831,035	+		IAI47_13370	0.18	-2.1
2,831,035	+		IAI47_13370	0.18	+0.2
2,831,035	+		IAI47_13370	0.18	-1.2
2,831,035	+		IAI47_13370	0.18	-0.4
2,831,035	+		IAI47_13370	0.18	-0.1
2,831,035	+		IAI47_13370	0.18	+1.2
2,831,035	+		IAI47_13370	0.18	+0.0
2,831,036	-		IAI47_13370	0.18	+0.0
2,831,036	-		IAI47_13370	0.18	+0.1
2,831,036	-		IAI47_13370	0.18	-1.7
2,831,036	-		IAI47_13370	0.18	-0.3
2,831,036	-		IAI47_13370	0.18	+0.0
2,831,036	-		IAI47_13370	0.18	+2.2
2,831,036	-		IAI47_13370	0.18	-0.3
2,831,036	-		IAI47_13370	0.18	+0.5
2,831,036	-		IAI47_13370	0.18	-0.2
2,831,036	-		IAI47_13370	0.18	-0.8
2,831,036	-		IAI47_13370	0.18	-0.1
2,831,036	-		IAI47_13370	0.18	-0.3
2,831,036	-		IAI47_13370	0.18	-1.3
2,831,038	+		IAI47_13370	0.18	-2.0
2,831,038	+		IAI47_13370	0.18	+1.7
2,831,038	+		IAI47_13370	0.18	+0.6
2,831,038	+		IAI47_13370	0.18	-0.5
2,831,038	+		IAI47_13370	0.18	+0.2
2,831,039	-		IAI47_13370	0.18	-1.6
2,831,039	-		IAI47_13370	0.18	+0.8
2,831,050	+		IAI47_13370	0.18	-0.6
2,831,050	+		IAI47_13370	0.18	-0.2
2,831,050	+		IAI47_13370	0.18	+0.2
2,831,050	+		IAI47_13370	0.18	+1.9
2,831,051	-		IAI47_13370	0.18	-0.9
2,831,074	+		IAI47_13370	0.19	-1.8
2,831,074	+		IAI47_13370	0.19	+0.7
2,831,074	+		IAI47_13370	0.19	-0.6
2,831,074	+		IAI47_13370	0.19	-0.3
2,831,074	+		IAI47_13370	0.19	-0.1
2,831,075	-		IAI47_13370	0.19	+0.5
2,831,101	+		IAI47_13370	0.20	-0.0
2,831,101	+		IAI47_13370	0.20	+0.9
2,831,101	+		IAI47_13370	0.20	-1.1
2,831,102	-		IAI47_13370	0.20	-0.8
2,831,104	+		IAI47_13370	0.21	-0.9
2,831,162	+		IAI47_13370	0.23	-1.5
2,831,162	+		IAI47_13370	0.23	-0.2
2,831,163	-		IAI47_13370	0.23	+0.1
2,831,163	-		IAI47_13370	0.23	+0.1
2,831,164	+		IAI47_13370	0.23	+2.5
2,831,164	+		IAI47_13370	0.23	-0.3
2,831,164	+		IAI47_13370	0.23	-1.0
2,831,165	-		IAI47_13370	0.23	-0.8
2,831,165	-		IAI47_13370	0.23	-0.7
2,831,165	-		IAI47_13370	0.23	-1.2
2,831,287	-		IAI47_13370	0.29	-2.6
2,831,287	-		IAI47_13370	0.29	+0.4
2,831,287	-		IAI47_13370	0.29	+1.1
2,831,310	-		IAI47_13370	0.30	+0.2
2,831,326	-		IAI47_13370	0.30	+0.2
2,831,326	-		IAI47_13370	0.30	-0.6
2,831,438	+		IAI47_13370	0.35	-0.8
2,831,477	+		IAI47_13370	0.37	+0.5
2,831,478	-		IAI47_13370	0.37	+0.4
2,831,478	-		IAI47_13370	0.37	-0.8
2,831,500	+		IAI47_13370	0.38	-0.5
2,831,500	+		IAI47_13370	0.38	+0.5
2,831,501	-		IAI47_13370	0.38	-0.1
2,831,501	-		IAI47_13370	0.38	-0.1
2,831,501	-		IAI47_13370	0.38	-1.5