Strain Fitness in Pantoea sp. MT58 around IAI47_12505

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,634,872	-				+0.1
2,634,887	+				+0.2
2,634,892	+				-1.5
2,634,892	+				-1.5
2,634,893	-				+1.2
2,634,893	-				-0.5
2,634,893	-				-0.1
2,634,948	+		IAI47_12500	0.12	-0.6
2,634,948	+		IAI47_12500	0.12	+0.6
2,634,948	+		IAI47_12500	0.12	+0.7
2,634,948	+		IAI47_12500	0.12	-0.1
2,634,948	+		IAI47_12500	0.12	+1.6
2,634,948	+		IAI47_12500	0.12	+0.5
2,634,948	+		IAI47_12500	0.12	+0.9
2,634,948	+		IAI47_12500	0.12	-1.1
2,634,948	+		IAI47_12500	0.12	-0.1
2,634,948	+		IAI47_12500	0.12	-0.4
2,634,948	+		IAI47_12500	0.12	-0.7
2,634,948	+		IAI47_12500	0.12	-1.6
2,634,948	+		IAI47_12500	0.12	+1.2
2,634,948	+		IAI47_12500	0.12	-2.6
2,634,948	+		IAI47_12500	0.12	+0.5
2,634,949	-		IAI47_12500	0.12	+0.4
2,634,949	-		IAI47_12500	0.12	+1.2
2,634,949	-		IAI47_12500	0.12	-0.1
2,634,949	-		IAI47_12500	0.12	+0.5
2,634,949	-		IAI47_12500	0.12	-0.8
2,634,949	-		IAI47_12500	0.12	-0.1
2,634,949	-		IAI47_12500	0.12	+0.2
2,634,949	-		IAI47_12500	0.12	-0.1
2,634,949	-		IAI47_12500	0.12	-0.4
2,634,949	-		IAI47_12500	0.12	-0.9
2,634,949	-		IAI47_12500	0.12	+0.2
2,634,949	-		IAI47_12500	0.12	+1.2
2,634,949	-		IAI47_12500	0.12	-1.2
2,634,949	-		IAI47_12500	0.12	-0.5
2,634,950	+		IAI47_12500	0.12	-0.7
2,634,950	+		IAI47_12500	0.12	+1.1
2,634,950	+		IAI47_12500	0.12	+0.2
2,634,950	+		IAI47_12500	0.12	-0.9
2,634,950	+		IAI47_12500	0.12	-0.1
2,634,950	+		IAI47_12500	0.12	+1.1
2,634,950	+		IAI47_12500	0.12	+1.2
2,634,950	+		IAI47_12500	0.12	-1.1
2,634,950	+		IAI47_12500	0.12	-0.6
2,634,950	+		IAI47_12500	0.12	+1.5
2,634,950	+		IAI47_12500	0.12	-0.3
2,634,950	+		IAI47_12500	0.12	+0.2
2,634,951	-		IAI47_12500	0.12	+0.4
2,634,951	-		IAI47_12500	0.12	-0.8
2,634,951	-		IAI47_12500	0.12	+0.2
2,634,951	-		IAI47_12500	0.12	+0.2
2,634,951	-		IAI47_12500	0.12	+1.9
2,634,951	-		IAI47_12500	0.12	-2.1
2,634,951	-		IAI47_12500	0.12	+0.2
2,634,951	-		IAI47_12500	0.12	+1.2
2,634,951	-		IAI47_12500	0.12	-0.2
2,634,951	-		IAI47_12500	0.12	+1.3
2,634,954	+		IAI47_12500	0.12	-0.3
2,634,955	-		IAI47_12500	0.12	-1.3
2,634,955	-		IAI47_12500	0.12	-0.9
2,634,955	-		IAI47_12500	0.12	+0.4
2,634,970	-		IAI47_12500	0.14	-0.1
2,635,052	+		IAI47_12500	0.22	-0.5
2,635,052	+		IAI47_12500	0.22	-0.3
2,635,053	-		IAI47_12500	0.22	-0.3
2,635,098	-		IAI47_12500	0.27	+0.4
2,635,143	-		IAI47_12500	0.32	-0.2
2,635,143	-		IAI47_12500	0.32	-0.6
2,635,170	+		IAI47_12500	0.34	-0.5
2,635,171	-		IAI47_12500	0.34	+0.3
2,635,194	+		IAI47_12500	0.37	+0.4
2,635,194	+		IAI47_12500	0.37	-0.7
2,635,194	+		IAI47_12500	0.37	+1.1
2,635,194	+		IAI47_12500	0.37	+0.7
2,635,195	-		IAI47_12500	0.37	-0.6
2,635,195	-		IAI47_12500	0.37	-0.1
2,635,197	+		IAI47_12500	0.37	-1.5
2,635,198	-		IAI47_12500	0.37	+0.0
2,635,307	+		IAI47_12500	0.48	+0.7
2,635,307	+		IAI47_12500	0.48	-0.1
2,635,307	+		IAI47_12500	0.48	-1.9
2,635,307	+		IAI47_12500	0.48	-0.6
2,635,307	+		IAI47_12500	0.48	-0.1
2,635,307	+		IAI47_12500	0.48	+0.2
2,635,308	-		IAI47_12500	0.49	-0.2
2,635,308	-		IAI47_12500	0.49	-0.8
2,635,308	-		IAI47_12500	0.49	+4.4
2,635,308	-		IAI47_12500	0.49	-0.1
2,635,308	-		IAI47_12500	0.49	+0.4
2,635,308	-		IAI47_12500	0.49	-1.1
2,635,314	+		IAI47_12500	0.49	-0.6
2,635,314	+		IAI47_12500	0.49	-0.4
2,635,314	+		IAI47_12500	0.49	-3.1
2,635,314	+		IAI47_12500	0.49	-1.1
2,635,315	-		IAI47_12500	0.49	+1.0
2,635,315	-		IAI47_12500	0.49	+0.7
2,635,315	-		IAI47_12500	0.49	-1.0
2,635,315	-		IAI47_12500	0.49	-0.3
2,635,387	+		IAI47_12500	0.57	+1.3
2,635,388	-		IAI47_12500	0.57	+0.2
2,635,404	+		IAI47_12500	0.58	-1.3
2,635,404	+		IAI47_12500	0.58	+0.1
2,635,404	+		IAI47_12500	0.58	-1.3
2,635,404	+		IAI47_12500	0.58	+0.0
2,635,404	+		IAI47_12500	0.58	-0.2
2,635,404	+		IAI47_12500	0.58	-0.1
2,635,404	+		IAI47_12500	0.58	-1.4
2,635,405	-		IAI47_12500	0.58	+0.9
2,635,405	-		IAI47_12500	0.58	+1.8
2,635,405	-		IAI47_12500	0.58	+1.2
2,635,405	-		IAI47_12500	0.58	+0.0
2,635,405	-		IAI47_12500	0.58	-0.1
2,635,406	+		IAI47_12500	0.59	-1.3
2,635,407	-		IAI47_12500	0.59	+0.5
2,635,422	+		IAI47_12500	0.60	-1.7
2,635,422	+		IAI47_12500	0.60	-0.3
2,635,422	+		IAI47_12500	0.60	-0.1
2,635,423	-		IAI47_12500	0.60	-2.8
2,635,423	-		IAI47_12500	0.60	+0.9
2,635,423	-		IAI47_12500	0.60	+1.0
2,635,424	+		IAI47_12500	0.60	+0.2
2,635,424	+		IAI47_12500	0.60	+1.0
2,635,424	+		IAI47_12500	0.60	-0.2
2,635,424	+		IAI47_12500	0.60	-0.2
2,635,425	-		IAI47_12500	0.61	+0.4
2,635,425	-		IAI47_12500	0.61	-1.5
2,635,425	-		IAI47_12500	0.61	+2.6
2,635,425	-		IAI47_12500	0.61	+0.8
2,635,425	-		IAI47_12500	0.61	-0.2
2,635,428	+		IAI47_12500	0.61	+1.4
2,635,428	+		IAI47_12500	0.61	+1.5
2,635,428	+		IAI47_12500	0.61	+0.5
2,635,429	-		IAI47_12500	0.61	-0.1
2,635,429	-		IAI47_12500	0.61	-2.5
2,635,429	-		IAI47_12500	0.61	-2.6
2,635,442	+		IAI47_12500	0.62	-0.3
2,635,442	+		IAI47_12500	0.62	+0.6
2,635,442	+		IAI47_12500	0.62	-0.3
2,635,442	+		IAI47_12500	0.62	-0.9
2,635,442	+		IAI47_12500	0.62	-1.8
2,635,443	-		IAI47_12500	0.62	+0.8
2,635,443	-		IAI47_12500	0.62	-2.2
2,635,443	-		IAI47_12500	0.62	-0.3
2,635,449	-				-0.7
2,635,476	+		IAI47_12500	0.66	-0.5
2,635,481	+		IAI47_12500	0.66	+1.7
2,635,481	+		IAI47_12500	0.66	+0.8
2,635,481	+		IAI47_12500	0.66	-0.8
2,635,482	-		IAI47_12500	0.66	+1.5
2,635,482	-		IAI47_12500	0.66	+0.4
2,635,512	+		IAI47_12500	0.69	+1.1
2,635,513	-		IAI47_12500	0.70	-0.8
2,635,579	+		IAI47_12500	0.76	+2.5
2,635,579	+		IAI47_12500	0.76	-0.5
2,635,579	+		IAI47_12500	0.76	+0.2
2,635,580	-		IAI47_12500	0.76	+0.1
2,635,611	+		IAI47_12500	0.80	+1.0
2,635,611	+		IAI47_12500	0.80	-0.5
2,635,612	-		IAI47_12500	0.80	+4.5
2,635,612	-		IAI47_12500	0.80	+0.4
2,635,680	+		IAI47_12500	0.87	-1.1
2,635,786	+				+1.5
2,635,786	+				-1.7
2,635,786	+				-0.8
2,635,787	-				+1.2
2,635,787	-				-0.3
2,635,811	-				+0.8
2,635,889	+				-0.5
2,635,889	+				+0.9
2,635,890	-				-0.4
2,635,890	-				-0.0
2,635,969	+		IAI47_12505	0.19	-0.8
2,635,969	+		IAI47_12505	0.19	-1.1
2,635,970	-		IAI47_12505	0.19	-0.4
2,635,970	-		IAI47_12505	0.19	+0.3
2,635,989	+		IAI47_12505	0.22	+1.5
2,635,989	+		IAI47_12505	0.22	+0.5
2,635,989	+		IAI47_12505	0.22	+1.4
2,635,990	-		IAI47_12505	0.22	+1.6
2,635,990	-		IAI47_12505	0.22	+0.8
2,635,994	+		IAI47_12505	0.23	-0.2
2,635,994	+		IAI47_12505	0.23	+0.1
2,635,994	+		IAI47_12505	0.23	+1.5
2,635,994	+		IAI47_12505	0.23	-1.1
2,635,994	+		IAI47_12505	0.23	-1.1
2,635,995	-		IAI47_12505	0.23	-0.1
2,635,995	-		IAI47_12505	0.23	+0.3
2,635,995	-		IAI47_12505	0.23	+0.2
2,635,995	-		IAI47_12505	0.23	+2.4
2,635,995	-		IAI47_12505	0.23	-1.4
2,635,995	-		IAI47_12505	0.23	+0.4
2,635,995	-		IAI47_12505	0.23	+0.6
2,636,054	+		IAI47_12505	0.32	+0.2
2,636,055	-		IAI47_12505	0.33	-1.7
2,636,108	+		IAI47_12505	0.41	-0.2
2,636,108	+		IAI47_12505	0.41	+2.2
2,636,108	+		IAI47_12505	0.41	+1.3
2,636,198	-		IAI47_12505	0.55	+0.4
2,636,198	-		IAI47_12505	0.55	+0.9
2,636,207	+		IAI47_12505	0.56	+0.1
2,636,276	+		IAI47_12505	0.67	+0.2
2,636,277	-		IAI47_12505	0.67	+1.2
2,636,277	-		IAI47_12505	0.67	+0.6
2,636,277	-		IAI47_12505	0.67	+1.5
2,636,277	-		IAI47_12505	0.67	+0.7
2,636,290	+		IAI47_12505	0.69	+1.3
2,636,290	+		IAI47_12505	0.69	-1.3
2,636,290	+		IAI47_12505	0.69	+2.3
2,636,290	+		IAI47_12505	0.69	+1.1
2,636,290	+		IAI47_12505	0.69	-3.2
2,636,290	+		IAI47_12505	0.69	-0.3
2,636,291	-		IAI47_12505	0.70	+3.1
2,636,291	-		IAI47_12505	0.70	+0.5
2,636,291	-		IAI47_12505	0.70	-0.2
2,636,291	-		IAI47_12505	0.70	+2.5
2,636,314	+		IAI47_12505	0.73	-0.1
2,636,315	-		IAI47_12505	0.73	-1.5
2,636,315	-		IAI47_12505	0.73	+3.5
2,636,315	-		IAI47_12505	0.73	+0.3
2,636,318	-		IAI47_12505	0.74	+1.7
2,636,318	-		IAI47_12505	0.74	+0.6
2,636,360	+		IAI47_12505	0.81	-1.1
2,636,361	-		IAI47_12505	0.81	-0.1
2,636,361	-		IAI47_12505	0.81	+0.2
2,636,403	+		IAI47_12505	0.87	-0.9
2,636,404	-		IAI47_12505	0.87	-0.3
2,636,418	+		IAI47_12505	0.90	+0.5
2,636,418	+		IAI47_12505	0.90	-0.7
2,636,420	+				-1.1
2,636,421	-				-0.7
2,636,421	-				-1.1
2,636,477	+				-1.5
2,636,490	-				-0.3
2,636,490	-				-0.1
2,636,518	+				-1.4
2,636,518	+				+2.1
2,636,518	+				-0.9
2,636,518	+				+1.4
2,636,518	+				-1.5
2,636,518	+				-0.4
2,636,518	+				-1.8
2,636,518	+				+0.5
2,636,519	-				+1.4
2,636,519	-				+1.7
2,636,519	-				-0.6
2,636,519	-				-0.5
2,636,519	-				+2.0
2,636,519	-				-1.8
2,636,519	-				+1.5
2,636,579	+				+0.5
2,636,579	+				+1.3
2,636,580	-				+1.0
2,636,580	-				-1.1
2,636,580	-				+1.2
2,636,634	+				-1.1
2,636,634	+				-1.3
2,636,634	+				+1.8
2,636,635	-				+0.4
2,636,635	-				+1.2
2,636,635	-				+0.5
2,636,635	-				+2.0
2,636,665	+				+0.8
2,636,666	-				+0.6
2,636,760	+				+0.5
2,636,760	+				-0.2
2,636,760	+				-1.1
2,636,760	+				-1.4
2,636,761	-				+0.1
2,636,761	-				-0.1
2,636,797	+				-0.6
2,636,797	+				+1.9
2,636,798	-				+0.2
2,636,798	-				-0.5
2,636,798	-				+0.1
2,636,820	-				-0.7
2,636,820	-				-0.1
2,636,820	-				+1.4
2,636,820	-				+0.1
2,636,856	+				-0.2
2,636,856	+				-0.6
2,636,857	-				-1.7
2,636,857	-				+0.3
2,636,857	-				-0.8
2,636,857	-				+1.2
2,636,907	+		IAI47_12510	0.11	+1.2
2,636,907	+		IAI47_12510	0.11	+0.6
2,636,907	+		IAI47_12510	0.11	-0.7
2,636,908	-		IAI47_12510	0.11	-0.1
2,636,908	-		IAI47_12510	0.11	+0.3
2,636,978	+		IAI47_12510	0.17	-1.3
2,636,978	+		IAI47_12510	0.17	+0.9
2,637,029	+		IAI47_12510	0.22	+1.2
2,637,030	-		IAI47_12510	0.22	+1.4
2,637,030	-		IAI47_12510	0.22	-0.3
2,637,030	-		IAI47_12510	0.22	+1.0
2,637,030	-		IAI47_12510	0.22	+1.0
2,637,039	+		IAI47_12510	0.23	+1.8
2,637,040	-		IAI47_12510	0.23	+0.4
2,637,040	-		IAI47_12510	0.23	-0.4
2,637,040	-		IAI47_12510	0.23	-0.9
2,637,140	-		IAI47_12510	0.32	+0.5
2,637,162	+		IAI47_12510	0.34	-0.6
2,637,162	+		IAI47_12510	0.34	+0.8
2,637,163	-		IAI47_12510	0.34	-0.3
2,637,163	-		IAI47_12510	0.34	-2.6
2,637,195	+		IAI47_12510	0.37	-0.2
2,637,211	-		IAI47_12510	0.39	+0.5
2,637,217	-		IAI47_12510	0.39	+0.5
2,637,217	-		IAI47_12510	0.39	+0.6
2,637,275	+		IAI47_12510	0.44	-0.9
2,637,275	+		IAI47_12510	0.44	-0.3
2,637,275	+		IAI47_12510	0.44	+2.6
2,637,342	-		IAI47_12510	0.51	-0.3
2,637,397	-		IAI47_12510	0.56	+1.3
2,637,397	-		IAI47_12510	0.56	-0.6