Strain Fitness in Pantoea sp. MT58 around IAI47_10995

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,319,472	-		IAI47_10990	0.15	-0.2
2,319,478	+		IAI47_10990	0.16	-0.8
2,319,526	-		IAI47_10990	0.22	+0.7
2,319,526	-		IAI47_10990	0.22	+1.3
2,319,555	+		IAI47_10990	0.26	-0.4
2,319,581	+		IAI47_10990	0.30	-0.6
2,319,581	+		IAI47_10990	0.30	+1.4
2,319,581	+		IAI47_10990	0.30	+0.1
2,319,581	+		IAI47_10990	0.30	-0.0
2,319,582	-		IAI47_10990	0.30	+1.1
2,319,582	-		IAI47_10990	0.30	-1.1
2,319,632	+		IAI47_10990	0.36	-0.8
2,319,632	+		IAI47_10990	0.36	+0.6
2,319,632	+		IAI47_10990	0.36	+2.0
2,319,633	-		IAI47_10990	0.36	-0.6
2,319,633	-		IAI47_10990	0.36	-0.1
2,319,633	-		IAI47_10990	0.36	+0.3
2,319,633	-		IAI47_10990	0.36	+1.5
2,319,641	+		IAI47_10990	0.38	-0.5
2,319,641	+		IAI47_10990	0.38	+0.5
2,319,641	+		IAI47_10990	0.38	+1.4
2,319,641	+		IAI47_10990	0.38	-1.4
2,319,641	+		IAI47_10990	0.38	+0.5
2,319,641	+		IAI47_10990	0.38	-0.0
2,319,641	+		IAI47_10990	0.38	-1.0
2,319,642	-		IAI47_10990	0.38	-0.6
2,319,642	-		IAI47_10990	0.38	+1.4
2,319,646	+		IAI47_10990	0.38	+1.2
2,319,646	+		IAI47_10990	0.38	+0.9
2,319,647	-		IAI47_10990	0.38	-0.5
2,319,647	-		IAI47_10990	0.38	+1.2
2,319,647	-		IAI47_10990	0.38	+1.0
2,319,647	-		IAI47_10990	0.38	+1.0
2,319,647	-		IAI47_10990	0.38	+0.5
2,319,647	-		IAI47_10990	0.38	-1.4
2,319,679	+		IAI47_10990	0.43	+0.7
2,319,737	+		IAI47_10990	0.50	-1.1
2,319,737	+		IAI47_10990	0.50	-1.0
2,319,782	+		IAI47_10990	0.56	-0.1
2,319,782	+		IAI47_10990	0.56	+2.4
2,319,782	+		IAI47_10990	0.56	+0.3
2,319,782	+		IAI47_10990	0.56	+0.8
2,319,788	+		IAI47_10990	0.57	+0.3
2,319,788	+		IAI47_10990	0.57	+2.2
2,319,788	+		IAI47_10990	0.57	+2.4
2,319,788	+		IAI47_10990	0.57	-0.3
2,319,788	+		IAI47_10990	0.57	+0.4
2,319,788	+		IAI47_10990	0.57	-0.1
2,319,789	-		IAI47_10990	0.57	+0.4
2,319,789	-		IAI47_10990	0.57	+1.9
2,319,789	-		IAI47_10990	0.57	+0.7
2,319,789	-		IAI47_10990	0.57	+0.9
2,319,789	-		IAI47_10990	0.57	+1.4
2,319,789	-		IAI47_10990	0.57	-0.0
2,319,789	-		IAI47_10990	0.57	+1.5
2,319,789	-		IAI47_10990	0.57	+1.7
2,319,795	+		IAI47_10990	0.58	+0.1
2,319,795	+		IAI47_10990	0.58	+0.6
2,319,795	+		IAI47_10990	0.58	+0.6
2,319,795	+		IAI47_10990	0.58	-1.1
2,319,796	-		IAI47_10990	0.58	-0.3
2,319,796	-		IAI47_10990	0.58	+0.9
2,319,796	-		IAI47_10990	0.58	+1.1
2,319,796	-		IAI47_10990	0.58	+1.7
2,319,796	-		IAI47_10990	0.58	-0.3
2,319,796	-		IAI47_10990	0.58	+0.5
2,319,796	-		IAI47_10990	0.58	-1.9
2,319,796	-		IAI47_10990	0.58	-0.6
2,319,796	-		IAI47_10990	0.58	+1.5
2,319,796	-		IAI47_10990	0.58	+0.9
2,319,803	+		IAI47_10990	0.59	-0.1
2,319,827	+		IAI47_10990	0.62	-1.0
2,319,827	+		IAI47_10990	0.62	-2.6
2,319,827	+		IAI47_10990	0.62	+0.5
2,319,828	-		IAI47_10990	0.62	+2.2
2,319,828	-		IAI47_10990	0.62	+0.9
2,319,861	+		IAI47_10990	0.66	+0.9
2,319,862	-		IAI47_10990	0.67	+0.5
2,319,862	-		IAI47_10990	0.67	-0.4
2,319,862	-		IAI47_10990	0.67	-0.1
2,319,864	+		IAI47_10990	0.67	-1.1
2,319,864	+		IAI47_10990	0.67	+1.7
2,319,865	-		IAI47_10990	0.67	+0.7
2,319,865	-		IAI47_10990	0.67	-0.9
2,319,865	-		IAI47_10990	0.67	-0.0
2,319,865	-		IAI47_10990	0.67	+1.0
2,319,865	-		IAI47_10990	0.67	+0.6
2,319,865	-		IAI47_10990	0.67	+0.6
2,319,865	-		IAI47_10990	0.67	-0.7
2,319,865	-		IAI47_10990	0.67	-0.9
2,319,887	+		IAI47_10990	0.70	-0.1
2,319,887	+		IAI47_10990	0.70	-0.9
2,319,887	+		IAI47_10990	0.70	+1.3
2,319,888	-		IAI47_10990	0.70	-0.4
2,319,888	-		IAI47_10990	0.70	+1.2
2,319,888	-		IAI47_10990	0.70	+2.0
2,319,894	+		IAI47_10990	0.71	-0.7
2,319,894	+		IAI47_10990	0.71	-0.5
2,319,894	+		IAI47_10990	0.71	+0.4
2,319,894	+		IAI47_10990	0.71	+1.6
2,319,894	+		IAI47_10990	0.71	+1.2
2,319,894	+		IAI47_10990	0.71	-0.6
2,319,895	-		IAI47_10990	0.71	+1.3
2,319,895	-		IAI47_10990	0.71	+1.2
2,319,895	-		IAI47_10990	0.71	-1.4
2,319,895	-		IAI47_10990	0.71	+0.3
2,319,895	-		IAI47_10990	0.71	-0.7
2,319,895	-		IAI47_10990	0.71	-0.1
2,319,895	-		IAI47_10990	0.71	+0.7
2,319,904	+		IAI47_10990	0.72	+0.9
2,319,905	+		IAI47_10990	0.72	-0.7
2,319,905	+		IAI47_10990	0.72	-3.2
2,319,906	-		IAI47_10990	0.72	+0.8
2,319,906	-		IAI47_10990	0.72	+0.1
2,319,906	-		IAI47_10990	0.72	+0.7
2,319,915	+		IAI47_10990	0.73	+0.1
2,319,915	+		IAI47_10990	0.73	+1.1
2,319,915	+		IAI47_10990	0.73	+0.3
2,319,915	+		IAI47_10990	0.73	+0.6
2,319,915	+		IAI47_10990	0.73	+1.3
2,319,915	+		IAI47_10990	0.73	+1.4
2,319,915	+		IAI47_10990	0.73	+0.3
2,319,915	+		IAI47_10990	0.73	-1.4
2,319,915	+		IAI47_10990	0.73	-1.3
2,319,916	-		IAI47_10990	0.74	-0.3
2,319,916	-		IAI47_10990	0.74	+0.7
2,319,916	-		IAI47_10990	0.74	-1.9
2,319,916	-		IAI47_10990	0.74	+1.8
2,319,916	-		IAI47_10990	0.74	-1.1
2,319,968	+		IAI47_10990	0.80	+0.9
2,319,968	+		IAI47_10990	0.80	+2.2
2,319,969	-		IAI47_10990	0.81	+0.9
2,319,969	-		IAI47_10990	0.81	+0.2
2,319,969	-		IAI47_10990	0.81	+0.3
2,320,008	+		IAI47_10990	0.86	+1.8
2,320,008	+		IAI47_10990	0.86	+0.9
2,320,009	-		IAI47_10990	0.86	+0.1
2,320,029	+		IAI47_10990	0.88	+2.4
2,320,029	+		IAI47_10990	0.88	+2.4
2,320,029	+		IAI47_10990	0.88	+2.4
2,320,030	-		IAI47_10990	0.89	-1.7
2,320,030	-		IAI47_10990	0.89	+1.5
2,320,030	-		IAI47_10990	0.89	-1.7
2,320,033	+		IAI47_10990	0.89	-0.4
2,320,034	-		IAI47_10990	0.89	-0.6
2,320,104	+				-0.4
2,320,105	-				-0.3
2,320,106	+				+0.2
2,320,106	+				-1.0
2,320,107	-				+1.7
2,320,107	-				+0.1
2,320,107	-				+1.8
2,320,107	-				+1.8
2,320,107	-				-0.7
2,320,117	+				-0.5
2,320,118	-				+0.2
2,320,118	-				-0.7
2,320,118	-				+0.4
2,320,141	-				+0.9
2,320,213	-				-0.9
2,320,254	+				+0.2
2,320,254	+				+0.8
2,320,254	+				-0.1
2,320,254	+				-0.4
2,320,254	+				+0.9
2,320,255	-				+1.5
2,320,255	-				+1.9
2,320,255	-				-0.5
2,320,270	+				+0.4
2,320,270	+				+1.3
2,320,271	-				+1.0
2,320,271	-				+1.3
2,320,273	+				+1.3
2,320,274	-				-0.3
2,320,274	-				+0.9
2,320,274	-				+0.3
2,320,286	+				+1.0
2,320,286	+				+0.9
2,320,286	+				-1.6
2,320,286	+				+1.3
2,320,286	+				-0.0
2,320,286	+				+0.1
2,320,287	-				-1.3
2,320,287	-				+1.4
2,320,287	-				+0.6
2,320,287	-				-0.6
2,320,287	-				+1.0
2,320,287	-				+0.3
2,320,287	-				+1.5
2,320,288	+				-0.5
2,320,289	-				+0.4
2,320,289	-				-1.0
2,320,289	-				-0.6
2,320,289	-				+1.0
2,320,289	-				-1.7
2,320,315	+				-0.1
2,320,404	-				+0.8
2,320,431	-				-0.3
2,320,462	+				+2.7
2,320,463	-				+0.5
2,320,484	+				-0.6
2,320,485	-				+0.9
2,320,492	+				+0.6
2,320,492	+				+0.6
2,320,492	+				+0.2
2,320,492	+				+0.5
2,320,492	+				+1.1
2,320,492	+				+0.6
2,320,572	+		IAI47_10995	0.32	-0.4
2,320,627	+		IAI47_10995	0.50	-0.7
2,320,627	+		IAI47_10995	0.50	+1.2
2,320,627	+		IAI47_10995	0.50	+1.4
2,320,627	+		IAI47_10995	0.50	+1.1
2,320,627	+		IAI47_10995	0.50	-0.6
2,320,627	+		IAI47_10995	0.50	+0.7
2,320,628	-		IAI47_10995	0.50	+1.1
2,320,628	-		IAI47_10995	0.50	-0.4
2,320,628	-		IAI47_10995	0.50	-1.7
2,320,628	-		IAI47_10995	0.50	+1.9
2,320,628	-		IAI47_10995	0.50	+0.4
2,320,628	-		IAI47_10995	0.50	-0.4
2,320,628	-		IAI47_10995	0.50	+1.4
2,320,628	-		IAI47_10995	0.50	-0.7
2,320,675	-		IAI47_10995	0.64	+0.0
2,320,738	+		IAI47_10995	0.84	+0.9
2,320,738	+		IAI47_10995	0.84	+0.7
2,320,739	-		IAI47_10995	0.84	+0.6
2,320,739	-		IAI47_10995	0.84	+0.9
2,320,739	-		IAI47_10995	0.84	+0.3
2,320,739	-		IAI47_10995	0.84	+0.5
2,320,739	-		IAI47_10995	0.84	+1.0
2,320,739	-		IAI47_10995	0.84	+0.3
2,320,786	+				+0.0
2,320,786	+				-0.4
2,320,786	+				-0.6
2,320,787	-				+0.3
2,320,818	-				+0.4
2,320,821	+				+0.5
2,320,828	+				-1.4
2,320,829	-				-0.6
2,320,829	-				+2.0
2,320,840	+				-0.9
2,320,840	+				-0.0
2,320,841	-				-1.1
2,320,841	-				+0.3
2,320,851	+				+2.1
2,320,881	+				-0.5
2,320,881	+				-0.7
2,320,881	+				+0.0
2,320,882	-				+0.4
2,320,904	+				+0.7
2,320,904	+				-0.8
2,320,950	+				+2.0
2,320,969	-		IAI47_11000	0.11	+1.3
2,320,976	-		IAI47_11000	0.12	-1.1
2,321,004	+		IAI47_11000	0.15	-0.1
2,321,005	-		IAI47_11000	0.15	-0.1
2,321,017	-		IAI47_11000	0.17	-0.1
2,321,089	-		IAI47_11000	0.25	+1.2
2,321,089	-		IAI47_11000	0.25	+0.3
2,321,089	-		IAI47_11000	0.25	+0.3
2,321,089	-		IAI47_11000	0.25	+1.7
2,321,089	-		IAI47_11000	0.25	-1.6
2,321,095	+		IAI47_11000	0.26	+1.4
2,321,095	+		IAI47_11000	0.26	+1.5
2,321,095	+		IAI47_11000	0.26	+0.1
2,321,096	-		IAI47_11000	0.26	+0.6
2,321,096	-		IAI47_11000	0.26	+1.4
2,321,140	+		IAI47_11000	0.31	+1.6
2,321,140	+		IAI47_11000	0.31	-1.8
2,321,140	+		IAI47_11000	0.31	-1.3
2,321,140	+		IAI47_11000	0.31	-1.1
2,321,141	-		IAI47_11000	0.31	-0.7
2,321,141	-		IAI47_11000	0.31	+0.4
2,321,141	-		IAI47_11000	0.31	+0.1
2,321,141	-		IAI47_11000	0.31	-1.9
2,321,141	-		IAI47_11000	0.31	-0.1
2,321,141	-		IAI47_11000	0.31	+0.7
2,321,141	-		IAI47_11000	0.31	-1.4
2,321,142	+		IAI47_11000	0.31	+2.4
2,321,143	-		IAI47_11000	0.31	-2.1
2,321,143	-		IAI47_11000	0.31	-2.4
2,321,250	+		IAI47_11000	0.43	+1.4
2,321,250	+		IAI47_11000	0.43	+0.3
2,321,250	+		IAI47_11000	0.43	+0.4
2,321,250	+		IAI47_11000	0.43	-0.5
2,321,251	-		IAI47_11000	0.43	+0.6
2,321,251	-		IAI47_11000	0.43	+0.7
2,321,251	-		IAI47_11000	0.43	+0.1
2,321,251	-		IAI47_11000	0.43	-0.5
2,321,253	+		IAI47_11000	0.43	+1.1
2,321,253	+		IAI47_11000	0.43	-0.5
2,321,253	+		IAI47_11000	0.43	+1.1
2,321,253	+		IAI47_11000	0.43	-1.3
2,321,253	+		IAI47_11000	0.43	-1.0
2,321,253	+		IAI47_11000	0.43	+1.3
2,321,253	+		IAI47_11000	0.43	+0.1
2,321,253	+		IAI47_11000	0.43	-0.1
2,321,254	-		IAI47_11000	0.43	+0.1
2,321,254	-		IAI47_11000	0.43	+0.4
2,321,254	-		IAI47_11000	0.43	-0.9
2,321,254	-		IAI47_11000	0.43	+0.4
2,321,254	-		IAI47_11000	0.43	-0.6
2,321,254	-		IAI47_11000	0.43	+0.3
2,321,254	-		IAI47_11000	0.43	-2.4
2,321,256	+		IAI47_11000	0.44	+0.3
2,321,256	+		IAI47_11000	0.44	-0.7
2,321,256	+		IAI47_11000	0.44	+0.5
2,321,256	+		IAI47_11000	0.44	+1.6
2,321,257	-		IAI47_11000	0.44	+2.1
2,321,257	-		IAI47_11000	0.44	-0.3
2,321,257	-		IAI47_11000	0.44	-1.1
2,321,257	-		IAI47_11000	0.44	-0.0
2,321,257	-		IAI47_11000	0.44	-0.7
2,321,257	-		IAI47_11000	0.44	-0.1
2,321,274	+		IAI47_11000	0.46	-0.1
2,321,274	+		IAI47_11000	0.46	+2.7
2,321,275	-		IAI47_11000	0.46	-1.2
2,321,275	-		IAI47_11000	0.46	+0.1
2,321,275	-		IAI47_11000	0.46	+2.3
2,321,275	-		IAI47_11000	0.46	+4.3
2,321,275	-		IAI47_11000	0.46	+0.4
2,321,362	+		IAI47_11000	0.55	+0.1
2,321,363	-		IAI47_11000	0.55	+0.4
2,321,457	+		IAI47_11000	0.66	-0.6
2,321,506	+		IAI47_11000	0.71	-0.1
2,321,532	-		IAI47_11000	0.74	+1.2
2,321,540	+		IAI47_11000	0.75	+1.2
2,321,540	+		IAI47_11000	0.75	-1.3
2,321,540	+		IAI47_11000	0.75	-2.0
2,321,540	+		IAI47_11000	0.75	+1.2
2,321,540	+		IAI47_11000	0.75	-0.6
2,321,540	+		IAI47_11000	0.75	-2.0
2,321,540	+		IAI47_11000	0.75	-1.5
2,321,540	+		IAI47_11000	0.75	+1.3
2,321,541	-		IAI47_11000	0.75	+1.6
2,321,541	-		IAI47_11000	0.75	+3.4
2,321,541	-		IAI47_11000	0.75	+1.3
2,321,541	-		IAI47_11000	0.75	-0.2
2,321,541	-		IAI47_11000	0.75	-0.5
2,321,541	-		IAI47_11000	0.75	+0.6
2,321,541	-		IAI47_11000	0.75	+0.4
2,321,541	-		IAI47_11000	0.75	+1.1
2,321,632	+		IAI47_11000	0.86	+1.0
2,321,641	+		IAI47_11000	0.87	+0.4
2,321,641	+		IAI47_11000	0.87	+2.0
2,321,641	+		IAI47_11000	0.87	-1.8
2,321,641	+		IAI47_11000	0.87	-0.6
2,321,641	+		IAI47_11000	0.87	-1.4
2,321,641	+		IAI47_11000	0.87	+0.3
2,321,642	-		IAI47_11000	0.87	-0.6
2,321,642	-		IAI47_11000	0.87	-0.8
2,321,642	-		IAI47_11000	0.87	+1.3
2,321,642	-		IAI47_11000	0.87	-1.0
2,321,644	+		IAI47_11000	0.87	+0.8
2,321,644	+		IAI47_11000	0.87	-2.0
2,321,645	-		IAI47_11000	0.87	+0.0
2,321,704	-				+2.3