Strain Fitness in Pantoea sp. MT58 around IAI47_09050

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,908,938	+				+0.3
1,908,939	-				-0.6
1,908,941	+				-0.5
1,908,941	+				-0.8
1,908,941	+				-2.4
1,908,941	+				-0.4
1,908,942	-				+1.7
1,908,942	-				-0.2
1,908,942	-				-0.6
1,908,942	-				+0.5
1,908,942	-				-1.0
1,908,942	-				+0.0
1,908,960	-				-1.9
1,908,960	-				-0.1
1,908,960	-				-0.8
1,908,990	+				+0.5
1,909,009	+		IAI47_09045	0.12	-0.9
1,909,010	-		IAI47_09045	0.12	+2.5
1,909,029	+		IAI47_09045	0.17	-2.8
1,909,029	+		IAI47_09045	0.17	-0.1
1,909,029	+		IAI47_09045	0.17	-0.6
1,909,029	+		IAI47_09045	0.17	+0.7
1,909,030	-		IAI47_09045	0.17	-1.0
1,909,030	-		IAI47_09045	0.17	+0.2
1,909,030	-		IAI47_09045	0.17	+1.2
1,909,074	+		IAI47_09045	0.28	-0.3
1,909,074	+		IAI47_09045	0.28	+0.9
1,909,075	-		IAI47_09045	0.28	+0.1
1,909,075	-		IAI47_09045	0.28	+2.2
1,909,075	-		IAI47_09045	0.28	+0.1
1,909,075	-		IAI47_09045	0.28	+2.1
1,909,076	+		IAI47_09045	0.28	-1.2
1,909,076	+		IAI47_09045	0.28	+0.3
1,909,076	+		IAI47_09045	0.28	-1.1
1,909,077	-		IAI47_09045	0.29	-0.5
1,909,077	-		IAI47_09045	0.29	-2.0
1,909,077	-		IAI47_09045	0.29	-0.4
1,909,077	-		IAI47_09045	0.29	-1.2
1,909,077	-		IAI47_09045	0.29	+0.1
1,909,077	-		IAI47_09045	0.29	-0.1
1,909,077	-		IAI47_09045	0.29	+0.9
1,909,082	+		IAI47_09045	0.30	-0.9
1,909,082	+		IAI47_09045	0.30	-1.2
1,909,082	+		IAI47_09045	0.30	-0.9
1,909,082	+		IAI47_09045	0.30	+0.7
1,909,082	+		IAI47_09045	0.30	-0.1
1,909,082	+		IAI47_09045	0.30	-0.1
1,909,083	-		IAI47_09045	0.30	-0.1
1,909,083	-		IAI47_09045	0.30	+0.7
1,909,107	+		IAI47_09045	0.36	-1.9
1,909,147	-		IAI47_09045	0.45	-1.1
1,909,194	-		IAI47_09045	0.57	+0.1
1,909,306	+		IAI47_09045	0.83	+0.9
1,909,313	+		IAI47_09045	0.85	+1.7
1,909,314	-		IAI47_09045	0.85	+0.5
1,909,339	-				-0.3
1,909,339	-				+0.1
1,909,345	-				+1.1
1,909,345	-				-0.7
1,909,347	+				-0.1
1,909,347	+				+1.7
1,909,348	-				+0.2
1,909,351	-				+0.3
1,909,391	+				+0.8
1,909,415	+				+0.9
1,909,418	+				-1.4
1,909,418	+				+0.4
1,909,418	+				-0.1
1,909,419	-				-0.6
1,909,434	-				+1.3
1,909,438	-				-2.0
1,909,471	+				+0.2
1,909,504	+				+3.1
1,909,505	-				-1.6
1,909,541	+				-1.3
1,909,567	+				+0.9
1,909,567	+				-1.1
1,909,572	-				-0.6
1,909,614	+				-0.1
1,909,625	+				+1.0
1,909,625	+				-0.2
1,909,626	-				+0.1
1,909,626	-				+0.5
1,909,658	+				+1.9
1,909,672	-				+0.2
1,909,672	-				+1.5
1,909,693	-				+0.2
1,909,693	-				+1.0
1,909,693	-				+2.5
1,909,699	+				+0.3
1,909,700	-				+1.2
1,909,721	+				-0.3
1,909,722	-				+0.8
1,909,722	-				-1.2
1,909,722	-				-0.9
1,909,722	-				-1.4
1,909,741	-				-1.4
1,909,743	+				-0.7
1,909,743	+				+2.3
1,909,743	+				+0.5
1,909,743	+				-0.4
1,909,743	+				-0.9
1,909,744	-				-1.7
1,909,776	+				-0.3
1,909,776	+				+0.4
1,909,777	-				-1.8
1,909,777	-				-2.0
1,909,784	+				+0.8
1,909,784	+				+0.6
1,909,785	-				-0.5
1,909,785	-				+1.5
1,909,797	+				+1.2
1,909,797	+				-0.3
1,909,797	+				+3.7
1,909,798	-				-2.6
1,909,803	+				+0.1
1,909,804	-				+0.4
1,909,806	+				+1.2
1,909,807	-				+0.5
1,909,807	-				+1.5
1,909,855	-		IAI47_09050	0.11	-0.5
1,909,855	-		IAI47_09050	0.11	+0.5
1,909,855	-		IAI47_09050	0.11	-0.9
1,909,856	+		IAI47_09050	0.11	+0.5
1,909,856	+		IAI47_09050	0.11	-0.5
1,909,857	-		IAI47_09050	0.12	-0.5
1,909,857	-		IAI47_09050	0.12	+0.1
1,909,857	-		IAI47_09050	0.12	-0.4
1,909,857	-		IAI47_09050	0.12	-0.9
1,909,857	-		IAI47_09050	0.12	+0.3
1,909,857	-		IAI47_09050	0.12	+0.9
1,909,857	-		IAI47_09050	0.12	+2.0
1,909,857	-		IAI47_09050	0.12	-0.9
1,909,860	+		IAI47_09050	0.12	-0.0
1,909,860	+		IAI47_09050	0.12	-0.2
1,909,860	+		IAI47_09050	0.12	-0.1
1,909,860	+		IAI47_09050	0.12	-0.9
1,909,861	-		IAI47_09050	0.12	-2.1
1,909,861	-		IAI47_09050	0.12	+3.2
1,909,890	+		IAI47_09050	0.17	+0.7
1,909,968	+		IAI47_09050	0.29	+0.2
1,909,968	+		IAI47_09050	0.29	-0.5
1,909,968	+		IAI47_09050	0.29	-1.4
1,909,969	-		IAI47_09050	0.30	+0.0
1,909,989	+		IAI47_09050	0.33	+0.2
1,910,024	+		IAI47_09050	0.38	-3.0
1,910,024	+		IAI47_09050	0.38	-0.4
1,910,025	-		IAI47_09050	0.39	+0.3
1,910,025	-		IAI47_09050	0.39	-1.8
1,910,038	+		IAI47_09050	0.41	+1.0
1,910,039	-		IAI47_09050	0.41	-0.4
1,910,039	-		IAI47_09050	0.41	-1.9
1,910,124	+		IAI47_09050	0.55	-0.1
1,910,125	-		IAI47_09050	0.55	-1.1
1,910,156	-		IAI47_09050	0.60	-1.3
1,910,172	+		IAI47_09050	0.62	+0.2
1,910,172	+		IAI47_09050	0.62	-1.6
1,910,193	-		IAI47_09050	0.66	-0.7
1,910,193	-		IAI47_09050	0.66	-1.9
1,910,207	+		IAI47_09050	0.68	+0.7
1,910,208	-		IAI47_09050	0.68	+0.5
1,910,213	+		IAI47_09050	0.69	+1.2
1,910,213	+		IAI47_09050	0.69	-0.1
1,910,214	-		IAI47_09050	0.69	-0.6
1,910,214	-		IAI47_09050	0.69	+0.2
1,910,214	-		IAI47_09050	0.69	-1.7
1,910,258	+		IAI47_09050	0.76	+1.3
1,910,267	+		IAI47_09050	0.78	-0.8
1,910,268	-		IAI47_09050	0.78	+1.7
1,910,268	-		IAI47_09050	0.78	-0.3
1,910,316	+		IAI47_09050	0.86	-0.2
1,910,316	+		IAI47_09050	0.86	-0.3
1,910,316	+		IAI47_09050	0.86	-1.4
1,910,316	+		IAI47_09050	0.86	-1.3
1,910,316	+		IAI47_09050	0.86	+0.5
1,910,317	-		IAI47_09050	0.86	-0.5
1,910,317	-		IAI47_09050	0.86	-1.2
1,910,318	+		IAI47_09050	0.86	+1.3
1,910,318	+		IAI47_09050	0.86	+0.7
1,910,318	+		IAI47_09050	0.86	+1.0
1,910,333	+		IAI47_09050	0.88	+1.2
1,910,333	+		IAI47_09050	0.88	+2.1
1,910,334	-		IAI47_09050	0.88	-0.3
1,910,334	-		IAI47_09050	0.88	-1.6
1,910,340	+		IAI47_09050	0.89	-0.1
1,910,340	+		IAI47_09050	0.89	+1.7
1,910,340	+		IAI47_09050	0.89	+0.6
1,910,341	-		IAI47_09050	0.90	-1.6
1,910,342	+		IAI47_09050	0.90	+0.2
1,910,343	-		IAI47_09050	0.90	-1.8
1,910,343	-		IAI47_09050	0.90	-0.3
1,910,353	+				-0.3
1,910,353	+				-0.3
1,910,353	+				+4.5
1,910,419	+				-0.3
1,910,422	+				+0.0
1,910,472	-				+0.9
1,910,493	+				-1.5
1,910,494	-				+0.2
1,910,494	-				-0.5
1,910,573	+				-0.6
1,910,573	+				-2.3
1,910,573	+				+0.4
1,910,573	+				-0.3
1,910,574	-				-2.5
1,910,589	+				-1.4
1,910,589	+				-1.6
1,910,589	+				-1.2
1,910,590	-				+0.0
1,910,746	-		IAI47_09055	0.10	-1.6
1,910,816	-		IAI47_09055	0.13	-1.3
1,910,816	-		IAI47_09055	0.13	-0.5
1,910,864	+		IAI47_09055	0.15	+0.3
1,910,865	-		IAI47_09055	0.15	-0.7
1,910,865	-		IAI47_09055	0.15	-1.7
1,910,909	+		IAI47_09055	0.16	+0.0
1,910,930	-		IAI47_09055	0.17	-1.1
1,910,930	-		IAI47_09055	0.17	-0.5
1,911,036	+		IAI47_09055	0.21	+0.5
1,911,037	-		IAI47_09055	0.21	-0.8
1,911,039	+		IAI47_09055	0.21	+0.2
1,911,039	+		IAI47_09055	0.21	+0.8
1,911,039	+		IAI47_09055	0.21	-0.3
1,911,040	-		IAI47_09055	0.21	+0.0
1,911,040	-		IAI47_09055	0.21	-1.4
1,911,040	-		IAI47_09055	0.21	+1.7
1,911,040	-		IAI47_09055	0.21	+1.1
1,911,092	+		IAI47_09055	0.23	-1.5
1,911,093	-		IAI47_09055	0.23	-0.9
1,911,153	-		IAI47_09055	0.25	+0.2
1,911,176	+		IAI47_09055	0.26	-2.0
1,911,176	+		IAI47_09055	0.26	-2.4
1,911,177	-		IAI47_09055	0.26	-0.1
1,911,237	+		IAI47_09055	0.28	-1.4
1,911,238	-		IAI47_09055	0.28	-2.8
1,911,238	-		IAI47_09055	0.28	-0.6
1,911,253	-		IAI47_09055	0.29	-1.5
1,911,287	+		IAI47_09055	0.30	-1.2
1,911,287	+		IAI47_09055	0.30	-0.1
1,911,288	-		IAI47_09055	0.30	-2.1
1,911,303	-		IAI47_09055	0.31	-0.7
1,911,398	-		IAI47_09055	0.34	-2.7