Strain Fitness in Pantoea sp. MT58 around IAI47_08620

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,819,507	+				+1.8
1,819,537	-				+0.2
1,819,556	+				+0.3
1,819,601	+				+1.0
1,819,611	+				-2.5
1,819,615	+				-0.7
1,819,615	+				+0.4
1,819,616	-				-0.3
1,819,625	+				+0.7
1,819,626	-				+0.7
1,819,628	+				+0.4
1,819,664	+				-1.4
1,819,664	+				+1.1
1,819,665	-				+0.0
1,819,749	+				-0.6
1,819,780	+				+0.8
1,819,781	-				-1.3
1,819,784	+				+0.1
1,819,784	+				+0.4
1,819,789	+				+1.7
1,819,789	+				+1.5
1,819,790	-				-1.2
1,819,790	-				+1.7
1,819,790	-				+1.2
1,819,791	+				-1.0
1,819,792	-				-1.4
1,819,806	-				+0.0
1,819,837	-				+0.4
1,819,839	+				-0.1
1,819,840	-				+1.5
1,819,840	-				-0.7
1,819,858	-				-1.0
1,819,874	+				+0.7
1,819,874	+				+1.3
1,819,875	-				+1.2
1,819,875	-				-0.9
1,819,875	-				+0.5
1,819,924	+				+1.1
1,819,924	+				-1.4
1,819,925	-				+0.2
1,819,990	-				-0.7
1,820,031	+				-0.6
1,820,031	+				+0.4
1,820,068	+				-1.5
1,820,068	+				-0.5
1,820,068	+				+0.8
1,820,068	+				+0.2
1,820,068	+				-1.5
1,820,068	+				+1.5
1,820,068	+				+0.2
1,820,069	-				+0.8
1,820,069	-				+2.0
1,820,069	-				+1.0
1,820,069	-				-0.5
1,820,070	+				+0.2
1,820,070	+				+0.7
1,820,070	+				+0.5
1,820,071	-				-0.9
1,820,071	-				-0.5
1,820,071	-				-1.4
1,820,071	-				+1.5
1,820,071	-				+0.5
1,820,071	-				-0.4
1,820,115	+				-0.8
1,820,116	-				-0.3
1,820,116	-				-0.0
1,820,182	+				-0.4
1,820,182	+				-0.3
1,820,183	-				-0.5
1,820,189	+				-0.4
1,820,189	+				+0.4
1,820,190	-				-1.5
1,820,200	+				+1.7
1,820,200	+				-1.5
1,820,200	+				+1.0
1,820,201	-				+0.9
1,820,201	-				-0.5
1,820,229	+				-2.9
1,820,266	-				+1.1
1,820,287	+				-0.8
1,820,287	+				+0.1
1,820,288	-				-0.9
1,820,288	-				+0.5
1,820,288	-				+1.3
1,820,313	+				+1.9
1,820,313	+				+0.4
1,820,313	+				+1.0
1,820,314	-				+2.1
1,820,314	-				+1.0
1,820,331	+				+1.5
1,820,335	-				+1.5
1,820,401	+				+0.2
1,820,401	+				+0.3
1,820,402	-				+1.0
1,820,408	+				+0.5
1,820,409	-				+0.2
1,820,435	+				-1.5
1,820,435	+				-0.2
1,820,435	+				-0.3
1,820,435	+				+0.2
1,820,435	+				+1.1
1,820,436	-				-0.6
1,820,436	-				-0.2
1,820,436	-				+0.1
1,820,436	-				+0.8
1,820,436	-				-1.0
1,820,436	-				-2.3
1,820,462	-				+0.4
1,820,469	-				-0.6
1,820,487	-				+0.8
1,820,489	+				+2.3
1,820,489	+				+0.3
1,820,490	-				-0.0
1,820,490	-				+0.9
1,820,575	+		IAI47_08620	0.10	-0.3
1,820,575	+		IAI47_08620	0.10	+0.3
1,820,575	+		IAI47_08620	0.10	-0.8
1,820,576	-		IAI47_08620	0.10	+0.7
1,820,576	-		IAI47_08620	0.10	-0.8
1,820,576	-		IAI47_08620	0.10	+1.0
1,820,576	-		IAI47_08620	0.10	+0.7
1,820,748	+		IAI47_08620	0.27	-1.3
1,820,749	-		IAI47_08620	0.27	-1.8
1,820,753	+		IAI47_08620	0.28	-1.3
1,820,754	-		IAI47_08620	0.28	-0.1
1,820,847	+		IAI47_08620	0.37	-0.8
1,820,847	+		IAI47_08620	0.37	-0.9
1,820,880	+		IAI47_08620	0.40	+0.2
1,820,880	+		IAI47_08620	0.40	-1.9
1,820,880	+		IAI47_08620	0.40	-0.9
1,820,880	+		IAI47_08620	0.40	+0.9
1,820,880	+		IAI47_08620	0.40	+0.4
1,820,880	+		IAI47_08620	0.40	+1.2
1,820,880	+		IAI47_08620	0.40	+1.5
1,820,880	+		IAI47_08620	0.40	-1.6
1,820,881	-		IAI47_08620	0.40	-0.1
1,820,881	-		IAI47_08620	0.40	-0.1
1,820,881	-		IAI47_08620	0.40	-1.5
1,820,881	-		IAI47_08620	0.40	-0.6
1,820,881	-		IAI47_08620	0.40	-0.3
1,820,881	-		IAI47_08620	0.40	-0.5
1,820,891	+		IAI47_08620	0.41	+0.7
1,820,891	+		IAI47_08620	0.41	+0.0
1,820,919	+		IAI47_08620	0.44	+2.4
1,820,919	+		IAI47_08620	0.44	+1.2
1,820,919	+		IAI47_08620	0.44	-0.4
1,820,919	+		IAI47_08620	0.44	+1.0
1,820,919	+		IAI47_08620	0.44	+0.2
1,820,919	+		IAI47_08620	0.44	+0.9
1,820,920	-		IAI47_08620	0.44	+0.5
1,820,920	-		IAI47_08620	0.44	+0.5
1,820,920	-		IAI47_08620	0.44	+0.5
1,820,920	-		IAI47_08620	0.44	-0.3
1,820,920	-		IAI47_08620	0.44	+1.7
1,820,920	-		IAI47_08620	0.44	-0.0
1,820,970	+		IAI47_08620	0.49	+0.5
1,820,970	+		IAI47_08620	0.49	+1.0
1,820,970	+		IAI47_08620	0.49	-1.2
1,820,970	+		IAI47_08620	0.49	+1.7
1,820,970	+		IAI47_08620	0.49	-2.1
1,820,970	+		IAI47_08620	0.49	+0.4
1,820,971	-		IAI47_08620	0.49	-0.6
1,820,971	-		IAI47_08620	0.49	-0.0
1,820,971	-		IAI47_08620	0.49	-0.2
1,821,007	-		IAI47_08620	0.53	-0.8
1,821,132	-		IAI47_08620	0.65	+2.3
1,821,178	+		IAI47_08620	0.69	-1.5
1,821,178	+		IAI47_08620	0.69	+0.3
1,821,179	-		IAI47_08620	0.69	-1.5
1,821,182	+		IAI47_08620	0.70	-0.2
1,821,182	+		IAI47_08620	0.70	+1.0
1,821,183	-		IAI47_08620	0.70	+1.9
1,821,183	-		IAI47_08620	0.70	-0.8
1,821,194	+		IAI47_08620	0.71	-1.0
1,821,195	-		IAI47_08620	0.71	+0.3
1,821,195	-		IAI47_08620	0.71	+0.8
1,821,195	-		IAI47_08620	0.71	-1.5
1,821,195	-		IAI47_08620	0.71	+0.2
1,821,195	-		IAI47_08620	0.71	-1.5
1,821,269	+		IAI47_08620	0.78	-0.9
1,821,269	+		IAI47_08620	0.78	+0.4
1,821,269	+		IAI47_08620	0.78	+1.0
1,821,269	+		IAI47_08620	0.78	+1.2
1,821,270	-		IAI47_08620	0.78	+0.4
1,821,270	-		IAI47_08620	0.78	-0.8
1,821,270	-		IAI47_08620	0.78	-1.2
1,821,270	-		IAI47_08620	0.78	-0.2
1,821,273	-		IAI47_08620	0.79	+1.3
1,821,286	+		IAI47_08620	0.80	+0.1
1,821,286	+		IAI47_08620	0.80	+1.4
1,821,380	+		IAI47_08620	0.89	-0.7
1,821,381	-		IAI47_08620	0.89	+1.4
1,821,381	-		IAI47_08620	0.89	-0.9
1,821,461	-				+0.5
1,821,489	+				+0.5
1,821,489	+				+1.0
1,821,489	+				+0.5
1,821,490	-				-0.0
1,821,490	-				-0.4
1,821,536	-				+1.2
1,821,539	-				+2.3
1,821,539	-				+1.1
1,821,539	-				+1.3
1,821,545	-				-1.3
1,821,545	-				+0.5
1,821,545	-				+0.6
1,821,545	-				-0.8
1,821,545	-				+0.3
1,821,587	+				+2.5
1,821,588	-				+0.2
1,821,590	+				-0.6
1,821,590	+				-1.3
1,821,591	-				+0.6
1,821,591	-				-1.4
1,821,591	-				+2.3
1,821,646	+				+1.7
1,821,649	-				+1.0
1,821,653	+				-0.5
1,821,672	-				+1.2
1,821,672	-				-0.5
1,821,672	-				+0.4
1,821,692	+				-0.9
1,821,692	+				+0.3
1,821,696	+				-0.3
1,821,696	+				-0.0
1,821,697	-				+2.5
1,821,697	-				+1.3
1,821,697	-				-0.6
1,821,713	+				+1.9
1,821,713	+				-1.5
1,821,714	-				-0.5
1,821,718	-				-1.6
1,821,732	-				-0.4
1,821,766	+				-0.3
1,821,767	-				+0.3
1,821,785	+				+1.5
1,821,786	-				-0.4
1,821,786	-				-0.2
1,821,833	-				+1.3
1,821,833	-				-0.3
1,821,860	+				+1.0
1,821,861	-				-0.5
1,821,864	-				-0.1
1,821,864	-				+1.6
1,821,919	+				-0.2
1,821,919	+				+0.3
1,821,920	-				-0.5
1,821,920	-				-1.7
1,821,920	-				+1.5
1,821,920	-				+1.3
1,821,920	-				+0.4
1,821,920	-				+0.9
1,821,920	-				+0.4
1,821,922	-				-0.6
1,821,922	-				+0.5
1,821,922	-				-1.4
1,821,942	+		IAI47_08625	0.13	-0.4
1,821,942	+		IAI47_08625	0.13	-0.5
1,821,942	+		IAI47_08625	0.13	+1.5
1,821,943	-		IAI47_08625	0.13	-0.4
1,821,943	-		IAI47_08625	0.13	+0.8
1,821,943	-		IAI47_08625	0.13	-1.5
1,821,943	-		IAI47_08625	0.13	+0.7
1,821,989	+		IAI47_08625	0.38	-1.0
1,821,989	+		IAI47_08625	0.38	+0.1
1,821,990	-		IAI47_08625	0.39	+0.2
1,822,029	-		IAI47_08625	0.60	-0.8
1,822,029	-		IAI47_08625	0.60	+0.5
1,822,029	-		IAI47_08625	0.60	-1.4
1,822,075	+		IAI47_08625	0.84	-0.1
1,822,075	+		IAI47_08625	0.84	-1.6
1,822,103	+				+0.3
1,822,104	-				-1.4
1,822,121	+				+1.5
1,822,150	+				-2.7
1,822,150	+				-0.4
1,822,150	+				-1.9
1,822,150	+				+4.2
1,822,151	-				-1.0
1,822,204	+				+0.3
1,822,205	-				-0.0
1,822,242	+				-0.3
1,822,242	+				-0.3
1,822,242	+				-0.7
1,822,242	+				-1.9
1,822,242	+				-1.9
1,822,242	+				-0.2
1,822,263	+				+1.5
1,822,264	-				-0.9
1,822,264	-				+1.8
1,822,264	-				+0.5
1,822,264	-				+2.3
1,822,272	+				+1.7
1,822,273	-				+0.9
1,822,375	+				-2.2
1,822,375	+				-1.0
1,822,376	-				+0.5
1,822,376	-				+1.9
1,822,404	+				-0.5
1,822,404	+				+0.2
1,822,404	+				+0.3
1,822,404	+				-0.0
1,822,404	+				+2.0
1,822,404	+				-0.9
1,822,404	+				-0.8
1,822,404	+				+0.1
1,822,404	+				-0.8
1,822,404	+				+0.5
1,822,404	+				+0.2
1,822,405	-				-0.9
1,822,405	-				-0.3
1,822,405	-				+3.3
1,822,405	-				+1.9
1,822,405	-				+0.6
1,822,405	-				-0.0
1,822,405	-				-2.0
1,822,405	-				+0.8
1,822,405	-				+2.0
1,822,408	+				+0.8
1,822,408	+				+0.1
1,822,408	+				+2.2
1,822,408	+				-0.0
1,822,408	+				-0.8
1,822,408	+				-0.2
1,822,408	+				-1.0
1,822,408	+				+1.5
1,822,408	+				-2.2
1,822,408	+				+1.3
1,822,408	+				+0.1
1,822,409	-				+0.2
1,822,409	-				-0.9
1,822,409	-				+0.9
1,822,409	-				-0.6
1,822,409	-				+0.9
1,822,409	-				+0.7
1,822,409	-				+2.0
1,822,409	-				+0.8
1,822,409	-				-1.3
1,822,409	-				+0.0
1,822,410	+				+2.3
1,822,410	+				+2.5
1,822,411	-				-0.5
1,822,411	-				-0.1
1,822,411	-				+0.2
1,822,415	+				-0.1
1,822,416	-				+0.1
1,822,416	-				-0.4
1,822,431	+				+1.2
1,822,431	+				+1.1
1,822,431	+				-1.2
1,822,431	+				+0.4
1,822,431	+				-1.2
1,822,431	+				-1.6
1,822,431	+				+3.1
1,822,431	+				+0.1
1,822,431	+				+0.4
1,822,431	+				+0.3
1,822,432	-				+1.6
1,822,432	-				+3.7
1,822,432	-				+1.3
1,822,432	-				+1.0
1,822,486	+		IAI47_08630	0.13	-0.5
1,822,486	+		IAI47_08630	0.13	-0.3
1,822,487	-		IAI47_08630	0.13	-1.8