Strain Fitness in Pantoea sp. MT58 around IAI47_21365

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
6,570	-				+2.8
6,584	-				+1.1
6,584	-				+2.9
6,584	-				-1.9
6,687	-		IAI47_21355	0.52	+0.6
6,687	-		IAI47_21355	0.52	-0.3
6,687	-		IAI47_21355	0.52	-0.5
6,687	-		IAI47_21355	0.52	-0.1
6,690	+		IAI47_21355	0.54	-0.8
6,691	-		IAI47_21355	0.54	+0.5
6,706	+		IAI47_21355	0.62	+0.7
6,784	+				-2.3
6,784	+				-1.9
6,784	+				-2.0
6,784	+				-2.3
6,785	-				+0.5
6,785	-				-0.6
6,822	+				-0.2
6,822	+				-0.1
6,823	-				+1.9
6,823	-				+0.4
6,823	-				-0.1
6,834	+				+0.1
6,834	+				+0.9
6,834	+				-1.5
6,834	+				+0.9
6,834	+				-0.7
6,835	-				-1.9
6,835	-				-0.9
6,842	+				-2.3
6,842	+				+1.2
6,843	-				-0.3
6,843	-				-0.1
6,843	-				+0.2
6,843	-				+0.8
6,863	-				+0.4
6,871	-				+3.1
6,878	+				-0.2
6,878	+				-0.3
6,897	-				-1.2
6,897	-				+1.4
6,897	-				+0.8
6,905	+				-0.6
6,913	+				+0.4
6,914	-				-0.5
6,914	-				+2.2
6,942	+				-1.0
7,011	+				-0.6
7,012	-				+0.5
7,012	-				+1.1
7,012	-				+0.1
7,032	+				-0.1
7,049	+				-2.3
7,050	-				-0.9
7,050	-				-1.4
7,191	+		IAI47_21360	0.17	+0.4
7,191	+		IAI47_21360	0.17	-0.9
7,192	-		IAI47_21360	0.17	+1.0
7,257	+		IAI47_21360	0.45	-1.9
7,258	-		IAI47_21360	0.45	-0.9
7,304	+		IAI47_21360	0.64	-0.4
7,304	+		IAI47_21360	0.64	-0.4
7,304	+		IAI47_21360	0.64	+2.5
7,304	+		IAI47_21360	0.64	+0.7
7,305	-		IAI47_21360	0.65	-0.9
7,305	-		IAI47_21360	0.65	-1.0
7,305	-		IAI47_21360	0.65	-0.5
7,305	-		IAI47_21360	0.65	-0.3
7,307	+		IAI47_21360	0.65	-0.4
7,307	+		IAI47_21360	0.65	+0.8
7,307	+		IAI47_21360	0.65	-0.4
7,308	-		IAI47_21360	0.66	+0.4
7,308	-		IAI47_21360	0.66	-2.8
7,322	-		IAI47_21360	0.72	+0.2
7,331	+		IAI47_21360	0.75	+1.5
7,331	+		IAI47_21360	0.75	+1.0
7,331	+		IAI47_21360	0.75	+0.1
7,331	+		IAI47_21360	0.75	+1.9
7,331	+		IAI47_21360	0.75	+2.7
7,331	+		IAI47_21360	0.75	-1.0
7,332	-		IAI47_21360	0.76	-0.1
7,332	-		IAI47_21360	0.76	+1.8
7,334	+		IAI47_21360	0.77	-1.2
7,334	+		IAI47_21360	0.77	+1.7
7,335	-		IAI47_21360	0.77	-0.5
7,335	-		IAI47_21360	0.77	+1.1
7,335	-		IAI47_21360	0.77	-1.3
7,335	-		IAI47_21360	0.77	+1.5
7,335	-		IAI47_21360	0.77	+2.4
7,337	+		IAI47_21360	0.78	+0.8
7,337	+		IAI47_21360	0.78	+1.1
7,338	-		IAI47_21360	0.78	-0.6
7,381	-				-1.1
7,381	-				-0.7
7,381	-				+0.9
7,408	+				-0.3
7,409	-				+0.0
7,409	-				+1.5
7,414	+				+0.5
7,415	-				+1.7
7,426	+				+0.7
7,426	+				-0.7
7,436	+				+0.0
7,436	+				+1.7
7,437	-				-0.8
7,437	-				-0.5
7,437	-				-0.6
7,441	+				-0.1
7,441	+				+1.4
7,441	+				+0.0
7,442	-				-1.8
7,442	-				-0.1
7,442	-				+0.0
7,490	+				+0.5
7,490	+				-0.9
7,490	+				+0.6
7,490	+				+0.1
7,490	+				+0.1
7,491	-				+0.7
7,494	+				+0.1
7,494	+				+2.3
7,495	-				-0.3
7,495	-				-0.1
7,558	+				-1.6
7,558	+				-0.5
7,564	+				+0.8
7,564	+				+0.2
7,564	+				-0.7
7,564	+				+0.2
7,564	+				+0.4
7,565	-				-0.1
7,565	-				+1.5
7,565	-				+0.2
7,565	-				+1.7
7,572	+				+0.3
7,572	+				-0.1
7,572	+				+0.1
7,573	-				+0.5
7,628	-		IAI47_21365	0.13	+1.1
7,639	+		IAI47_21365	0.15	+1.9
7,639	+		IAI47_21365	0.15	+0.0
7,639	+		IAI47_21365	0.15	+0.6
7,640	-		IAI47_21365	0.15	-0.9
7,640	-		IAI47_21365	0.15	+2.7
7,640	-		IAI47_21365	0.15	-0.8
7,640	-		IAI47_21365	0.15	-1.5
7,640	-		IAI47_21365	0.15	-0.3
7,640	-		IAI47_21365	0.15	-1.4
7,648	+		IAI47_21365	0.17	+0.2
7,648	+		IAI47_21365	0.17	-0.8
7,657	+		IAI47_21365	0.19	-0.4
7,658	-		IAI47_21365	0.19	-0.5
7,675	-		IAI47_21365	0.22	-1.6
7,691	+		IAI47_21365	0.26	-1.6
7,691	+		IAI47_21365	0.26	-1.8
7,691	+		IAI47_21365	0.26	+0.8
7,691	+		IAI47_21365	0.26	-0.9
7,692	-		IAI47_21365	0.26	+2.1
7,699	+		IAI47_21365	0.27	-1.4
7,699	+		IAI47_21365	0.27	+1.2
7,699	+		IAI47_21365	0.27	-0.8
7,699	+		IAI47_21365	0.27	+0.5
7,699	+		IAI47_21365	0.27	-0.1
7,700	-		IAI47_21365	0.28	-0.8
7,700	-		IAI47_21365	0.28	+0.3
7,700	-		IAI47_21365	0.28	+2.3
7,700	-		IAI47_21365	0.28	+0.5
7,721	+		IAI47_21365	0.32	+0.1
7,776	+		IAI47_21365	0.43	-0.1
7,776	+		IAI47_21365	0.43	+1.2
7,777	-		IAI47_21365	0.43	-1.9
7,777	-		IAI47_21365	0.43	+0.9
7,922	-		IAI47_21365	0.73	-1.3
7,922	-		IAI47_21365	0.73	-0.3
7,922	-		IAI47_21365	0.73	+0.7
7,922	-		IAI47_21365	0.73	-0.5
7,923	+		IAI47_21365	0.73	-0.3
7,923	+		IAI47_21365	0.73	+0.7
7,923	+		IAI47_21365	0.73	+0.8
7,923	+		IAI47_21365	0.73	-0.3
7,923	+		IAI47_21365	0.73	+0.4
7,923	+		IAI47_21365	0.73	+0.9
7,923	+		IAI47_21365	0.73	+0.4
7,923	+		IAI47_21365	0.73	+0.7
7,923	+		IAI47_21365	0.73	-1.5
7,924	-		IAI47_21365	0.73	-0.0
7,924	-		IAI47_21365	0.73	-1.6
7,924	-		IAI47_21365	0.73	-0.7
7,924	-		IAI47_21365	0.73	-1.0
7,924	-		IAI47_21365	0.73	-0.3
7,924	-		IAI47_21365	0.73	-1.0
7,983	+		IAI47_21365	0.85	-2.5
7,983	+		IAI47_21365	0.85	+1.3
7,984	-		IAI47_21365	0.86	+0.2
8,008	+				-0.6
8,009	-				+0.3
8,035	+				+1.2
8,035	+				+0.2
8,035	+				+1.6
8,051	+				+0.5
8,051	+				-0.3
8,051	+				+1.8
8,051	+				+0.3
8,052	-				+1.9
8,052	-				-0.1
8,052	-				+1.5
8,052	-				+1.1
8,052	-				-0.6
8,054	+				-1.0
8,055	-				-0.1
8,055	-				+0.4
8,055	-				+0.9
8,094	+				-1.1
8,094	+				+0.2
8,094	+				+1.5
8,142	+				-0.6
8,142	+				-1.0
8,143	-				+0.4
8,143	-				-0.9
8,143	-				+0.7
8,143	-				-0.2
8,148	+				-0.1
8,148	+				-0.0
8,149	-				+1.5
8,149	-				+2.3
8,149	-				+2.7
8,149	-				-0.1
8,172	+				+1.5
8,217	+		IAI47_21370	0.12	-0.3
8,218	-		IAI47_21370	0.12	+0.5
8,218	-		IAI47_21370	0.12	-0.1
8,218	-		IAI47_21370	0.12	-0.3
8,218	-		IAI47_21370	0.12	+0.8
8,241	+		IAI47_21370	0.15	-0.2
8,242	-		IAI47_21370	0.15	+2.2
8,242	-		IAI47_21370	0.15	+0.7
8,346	+		IAI47_21370	0.29	+1.1
8,347	-		IAI47_21370	0.29	-0.5
8,347	-		IAI47_21370	0.29	+1.8
8,386	-		IAI47_21370	0.34	+2.3
8,546	+		IAI47_21370	0.55	+0.1
8,547	-		IAI47_21370	0.55	-0.3
8,554	-		IAI47_21370	0.56	-1.1
8,554	-		IAI47_21370	0.56	+0.1
8,558	+		IAI47_21370	0.57	+0.6
8,558	+		IAI47_21370	0.57	-0.1
8,559	-		IAI47_21370	0.57	+0.4
8,559	-		IAI47_21370	0.57	+0.2
8,559	-		IAI47_21370	0.57	+0.1
8,559	-		IAI47_21370	0.57	-0.2
8,574	-		IAI47_21370	0.59	-0.9
8,574	-		IAI47_21370	0.59	-1.1
8,608	-		IAI47_21370	0.63	-0.9
8,643	+		IAI47_21370	0.68	-0.3
8,644	-		IAI47_21370	0.68	+1.1
8,644	-		IAI47_21370	0.68	+0.7
8,644	-		IAI47_21370	0.68	-1.2
8,644	-		IAI47_21370	0.68	+2.3
8,694	+		IAI47_21370	0.74	+0.2
8,694	+		IAI47_21370	0.74	+0.3
8,694	+		IAI47_21370	0.74	+0.9
8,694	+		IAI47_21370	0.74	+0.5
8,695	-		IAI47_21370	0.75	+2.3
8,695	-		IAI47_21370	0.75	-0.3
8,695	-		IAI47_21370	0.75	-1.4
8,695	-		IAI47_21370	0.75	+1.7
8,704	-		IAI47_21370	0.76	+0.5
8,721	+		IAI47_21370	0.78	+0.8
8,721	+		IAI47_21370	0.78	+0.7
8,721	+		IAI47_21370	0.78	-0.5
8,721	+		IAI47_21370	0.78	+0.4
8,721	+		IAI47_21370	0.78	-0.7
8,721	+		IAI47_21370	0.78	-0.6
8,721	+		IAI47_21370	0.78	-0.1
8,721	+		IAI47_21370	0.78	-1.0
8,721	+		IAI47_21370	0.78	+0.6
8,721	+		IAI47_21370	0.78	-0.8
8,722	-		IAI47_21370	0.78	+0.9
8,722	-		IAI47_21370	0.78	-0.6
8,722	-		IAI47_21370	0.78	-1.5
8,722	-		IAI47_21370	0.78	-1.4
8,722	-		IAI47_21370	0.78	+1.3
8,722	-		IAI47_21370	0.78	-0.0
8,722	-		IAI47_21370	0.78	-0.5
8,722	-		IAI47_21370	0.78	-0.0
8,752	+		IAI47_21370	0.82	+0.2
8,752	+		IAI47_21370	0.82	-0.8
8,752	+		IAI47_21370	0.82	-0.5
8,752	+		IAI47_21370	0.82	+0.8
8,753	-		IAI47_21370	0.82	-1.4
8,753	-		IAI47_21370	0.82	-0.8
8,753	-		IAI47_21370	0.82	+0.3
8,772	+		IAI47_21370	0.85	-2.2
8,772	+		IAI47_21370	0.85	-1.5
8,772	+		IAI47_21370	0.85	-0.6
8,773	-		IAI47_21370	0.85	+0.5
8,773	-		IAI47_21370	0.85	-0.8
8,773	-		IAI47_21370	0.85	+0.4
8,773	-		IAI47_21370	0.85	+2.2
8,781	-		IAI47_21370	0.86	+1.4
8,807	-		IAI47_21370	0.89	+0.8
8,863	+				-0.8
8,863	+				-0.3
8,863	+				+0.5
8,863	+				-0.5
8,863	+				-0.3
8,863	+				+1.5
8,863	+				+0.4
8,863	+				-0.2
8,863	+				+0.6
8,863	+				-0.9
8,864	-				+1.0
8,864	-				+1.1
8,864	-				-1.4
8,864	-				+1.2
8,864	-				+1.0
8,864	-				-0.5
8,864	-				+2.2
8,864	-				+1.9
8,864	-				+1.1
8,874	+				-2.0
8,875	-				-0.6
8,889	+				+2.3
8,889	+				-0.4
8,889	+				+1.1
8,889	+				+0.8
8,889	+				+0.6
8,889	+				-1.2
8,889	+				-0.8
8,889	+				-0.1
8,889	+				+0.2
8,889	+				+1.0
8,889	+				-1.4
8,889	+				-1.5
8,889	+				+2.0
8,889	+				-1.0
8,889	+				+1.1
8,890	-				+0.5
8,890	-				-0.1
8,890	-				+1.2
8,890	-				+0.6
8,890	-				-1.4
8,890	-				-1.4
8,890	-				-1.2
8,890	-				-1.1
8,890	-				+0.0
8,890	-				+1.5
8,890	-				+1.2
8,893	+				+1.7
8,893	+				+0.6
8,893	+				+3.6
8,893	+				+1.1
8,893	+				-0.8
8,893	+				+0.3
8,893	+				+0.7
8,893	+				+0.0
8,893	+				-0.0
8,893	+				+1.9
8,893	+				+1.2
8,893	+				-1.7
8,893	+				-0.9
8,893	+				+0.2
8,894	-				+0.3
8,894	-				-0.5
8,894	-				+0.4
8,894	-				+0.8
8,894	-				-0.6
8,894	-				+0.7
8,894	-				+2.4
8,894	-				+1.1
8,897	-				+0.2
8,943	-				+0.2
8,943	-				+0.5
8,943	-				-1.0
8,970	-				+0.8
9,014	-				+0.3
9,014	-				+0.4
9,026	+				+1.2
9,026	+				-1.0