Strain Fitness in Pantoea sp. MT58 around IAI47_16295

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,453,725	-				-0.5
3,453,783	+		IAI47_16290	0.13	-1.5
3,453,783	+		IAI47_16290	0.13	+0.6
3,453,783	+		IAI47_16290	0.13	-0.3
3,453,783	+		IAI47_16290	0.13	+0.6
3,453,783	+		IAI47_16290	0.13	-0.6
3,453,783	+		IAI47_16290	0.13	+1.6
3,453,783	+		IAI47_16290	0.13	-0.8
3,453,783	+		IAI47_16290	0.13	+1.8
3,453,783	+		IAI47_16290	0.13	+0.9
3,453,784	-		IAI47_16290	0.13	+1.0
3,453,784	-		IAI47_16290	0.13	-0.2
3,453,784	-		IAI47_16290	0.13	+0.0
3,453,784	-		IAI47_16290	0.13	-1.5
3,453,784	-		IAI47_16290	0.13	+0.7
3,453,784	-		IAI47_16290	0.13	+1.2
3,453,784	-		IAI47_16290	0.13	+0.8
3,453,784	-		IAI47_16290	0.13	+1.3
3,453,784	-		IAI47_16290	0.13	+1.0
3,453,785	+		IAI47_16290	0.13	-1.5
3,453,785	+		IAI47_16290	0.13	-0.1
3,453,786	-		IAI47_16290	0.13	+0.1
3,453,786	-		IAI47_16290	0.13	+0.1
3,453,786	-		IAI47_16290	0.13	-1.6
3,453,817	-		IAI47_16290	0.16	+0.1
3,453,817	-		IAI47_16290	0.16	-0.1
3,453,906	+		IAI47_16290	0.25	-1.2
3,453,922	-		IAI47_16290	0.26	+0.4
3,453,922	-		IAI47_16290	0.26	+0.5
3,453,922	-		IAI47_16290	0.26	+0.5
3,453,922	-		IAI47_16290	0.26	-0.7
3,453,922	-		IAI47_16290	0.26	-0.2
3,453,922	-		IAI47_16290	0.26	+0.3
3,453,922	-		IAI47_16290	0.26	-1.6
3,453,962	+		IAI47_16290	0.30	+0.2
3,453,962	+		IAI47_16290	0.30	+1.2
3,453,962	+		IAI47_16290	0.30	+0.7
3,453,962	+		IAI47_16290	0.30	+0.6
3,453,962	+		IAI47_16290	0.30	+1.0
3,453,963	-		IAI47_16290	0.30	-1.5
3,453,963	-		IAI47_16290	0.30	-1.1
3,453,963	-		IAI47_16290	0.30	-1.5
3,453,963	-		IAI47_16290	0.30	+3.9
3,453,963	-		IAI47_16290	0.30	+0.9
3,453,963	-		IAI47_16290	0.30	+0.6
3,453,963	-		IAI47_16290	0.30	-0.3
3,453,963	-		IAI47_16290	0.30	-0.1
3,454,014	+		IAI47_16290	0.35	-0.4
3,454,015	-		IAI47_16290	0.35	+2.4
3,454,015	-		IAI47_16290	0.35	-0.3
3,454,111	-		IAI47_16290	0.44	+2.2
3,454,111	-		IAI47_16290	0.44	+2.5
3,454,111	-		IAI47_16290	0.44	-0.9
3,454,111	-		IAI47_16290	0.44	+2.2
3,454,111	-		IAI47_16290	0.44	-0.5
3,454,140	+		IAI47_16290	0.46	-0.4
3,454,141	-		IAI47_16290	0.46	-1.1
3,454,141	-		IAI47_16290	0.46	+1.4
3,454,141	-		IAI47_16290	0.46	+3.0
3,454,148	+		IAI47_16290	0.47	-0.3
3,454,149	-		IAI47_16290	0.47	+1.4
3,454,149	-		IAI47_16290	0.47	-1.1
3,454,208	+		IAI47_16290	0.53	-0.2
3,454,208	+		IAI47_16290	0.53	+0.8
3,454,208	+		IAI47_16290	0.53	-0.7
3,454,208	+		IAI47_16290	0.53	-1.1
3,454,209	-		IAI47_16290	0.53	-0.1
3,454,209	-		IAI47_16290	0.53	-0.2
3,454,209	-		IAI47_16290	0.53	+1.4
3,454,211	+		IAI47_16290	0.53	-0.7
3,454,211	+		IAI47_16290	0.53	+0.8
3,454,211	+		IAI47_16290	0.53	-0.4
3,454,212	-		IAI47_16290	0.53	+0.2
3,454,212	-		IAI47_16290	0.53	+0.5
3,454,258	+		IAI47_16290	0.57	+0.9
3,454,258	+		IAI47_16290	0.57	-1.5
3,454,258	+		IAI47_16290	0.57	+1.2
3,454,259	-		IAI47_16290	0.57	+0.3
3,454,259	-		IAI47_16290	0.57	+1.6
3,454,263	-		IAI47_16290	0.58	-2.2
3,454,263	-		IAI47_16290	0.58	-0.6
3,454,263	-		IAI47_16290	0.58	-0.3
3,454,273	+		IAI47_16290	0.59	-2.4
3,454,273	+		IAI47_16290	0.59	+1.2
3,454,384	-		IAI47_16290	0.69	-1.8
3,454,405	+		IAI47_16290	0.71	+0.0
3,454,405	+		IAI47_16290	0.71	+1.3
3,454,405	+		IAI47_16290	0.71	+1.1
3,454,406	-		IAI47_16290	0.71	-1.8
3,454,406	-		IAI47_16290	0.71	-1.8
3,454,406	-		IAI47_16290	0.71	-0.2
3,454,406	-		IAI47_16290	0.71	-1.8
3,454,408	+		IAI47_16290	0.71	+0.4
3,454,408	+		IAI47_16290	0.71	-1.1
3,454,408	+		IAI47_16290	0.71	+0.3
3,454,408	+		IAI47_16290	0.71	+1.0
3,454,408	+		IAI47_16290	0.71	-0.0
3,454,408	+		IAI47_16290	0.71	-0.6
3,454,409	-		IAI47_16290	0.71	-1.4
3,454,409	-		IAI47_16290	0.71	+2.7
3,454,455	+		IAI47_16290	0.76	-2.0
3,454,455	+		IAI47_16290	0.76	-0.6
3,454,455	+		IAI47_16290	0.76	+0.2
3,454,455	+		IAI47_16290	0.76	-0.8
3,454,455	+		IAI47_16290	0.76	-0.6
3,454,455	+		IAI47_16290	0.76	+0.1
3,454,456	-		IAI47_16290	0.76	+1.3
3,454,456	-		IAI47_16290	0.76	+0.8
3,454,456	-		IAI47_16290	0.76	+1.2
3,454,456	-		IAI47_16290	0.76	-0.4
3,454,456	-		IAI47_16290	0.76	+1.2
3,454,475	+		IAI47_16290	0.78	+2.2
3,454,475	+		IAI47_16290	0.78	-2.0
3,454,475	+		IAI47_16290	0.78	+0.7
3,454,476	-		IAI47_16290	0.78	+0.6
3,454,510	+		IAI47_16290	0.81	+1.5
3,454,510	+		IAI47_16290	0.81	-1.9
3,454,510	+		IAI47_16290	0.81	-0.0
3,454,510	+		IAI47_16290	0.81	+0.0
3,454,623	+				+0.2
3,454,624	-				-0.3
3,454,624	-				+1.4
3,454,729	+				-0.4
3,454,897	+		IAI47_16295	0.23	-0.8
3,454,898	-		IAI47_16295	0.23	-0.1
3,454,898	-		IAI47_16295	0.23	+2.2
3,454,952	+		IAI47_16295	0.30	-2.2
3,454,952	+		IAI47_16295	0.30	-0.5
3,454,952	+		IAI47_16295	0.30	-2.1
3,454,953	-		IAI47_16295	0.30	+0.7
3,454,953	-		IAI47_16295	0.30	+0.5
3,455,018	-		IAI47_16295	0.39	+1.3
3,455,032	+		IAI47_16295	0.40	-0.3
3,455,032	+		IAI47_16295	0.40	-0.5
3,455,033	-		IAI47_16295	0.41	-0.3
3,455,033	-		IAI47_16295	0.41	-1.2
3,455,050	-		IAI47_16295	0.43	+0.8
3,455,050	-		IAI47_16295	0.43	-1.6
3,455,050	-		IAI47_16295	0.43	-1.2
3,455,056	-				+1.1
3,455,056	-		IAI47_16295	0.43	+1.4
3,455,056	-		IAI47_16295	0.43	-1.6
3,455,080	+		IAI47_16295	0.46	-0.8
3,455,081	-		IAI47_16295	0.47	-0.3
3,455,090	-		IAI47_16295	0.48	+1.3
3,455,205	+		IAI47_16295	0.62	-0.1
3,455,315	+		IAI47_16295	0.76	+2.0
3,455,315	+		IAI47_16295	0.76	-2.4
3,455,315	+		IAI47_16295	0.76	-0.1
3,455,364	+		IAI47_16295	0.82	+0.2
3,455,364	+		IAI47_16295	0.82	+0.8
3,455,365	-		IAI47_16295	0.82	+1.1
3,455,365	-		IAI47_16295	0.82	-1.1
3,455,490	-				+0.3
3,455,490	-				+1.2
3,455,532	+				+0.1
3,455,532	+				-0.2
3,455,533	-				+0.3
3,455,535	+				+0.5
3,455,535	+				+1.8
3,455,535	+				+0.8
3,455,535	+				+0.1
3,455,536	-				-1.1
3,455,536	-				+0.9
3,455,536	-				+0.1
3,455,536	-				+2.3
3,455,549	+				+0.6
3,455,549	+				+1.2
3,455,550	-				+0.3
3,455,550	-				+0.9
3,455,550	-				+0.5
3,455,742	+		IAI47_16300	0.34	+0.4
3,455,742	+		IAI47_16300	0.34	+2.1
3,455,742	+		IAI47_16300	0.34	+0.1
3,455,742	+		IAI47_16300	0.34	+0.1
3,455,742	+		IAI47_16300	0.34	+0.7
3,455,742	+		IAI47_16300	0.34	-0.8
3,455,743	-		IAI47_16300	0.34	+3.9
3,455,743	-		IAI47_16300	0.34	+1.4
3,455,853	+		IAI47_16300	0.50	+1.0
3,455,853	+		IAI47_16300	0.50	-0.3
3,455,853	+		IAI47_16300	0.50	-0.1
3,455,853	+		IAI47_16300	0.50	+0.9
3,455,853	+		IAI47_16300	0.50	+1.0
3,455,853	+		IAI47_16300	0.50	-2.6
3,455,853	+		IAI47_16300	0.50	-0.1
3,455,853	+		IAI47_16300	0.50	-0.8
3,455,854	-		IAI47_16300	0.50	+0.5
3,455,854	-		IAI47_16300	0.50	-0.8
3,455,854	-		IAI47_16300	0.50	-0.9
3,455,854	-		IAI47_16300	0.50	-0.3
3,455,854	-		IAI47_16300	0.50	-1.6
3,455,854	-		IAI47_16300	0.50	-0.5
3,455,854	-		IAI47_16300	0.50	+0.6
3,455,860	+		IAI47_16300	0.51	-0.1
3,456,056	+		IAI47_16300	0.79	-1.6
3,456,056	+		IAI47_16300	0.79	-0.4
3,456,056	+		IAI47_16300	0.79	+0.7
3,456,056	+		IAI47_16300	0.79	+0.8
3,456,057	-		IAI47_16300	0.79	+1.8
3,456,057	-		IAI47_16300	0.79	-1.1
3,456,114	+		IAI47_16300	0.87	-1.2
3,456,114	+		IAI47_16300	0.87	+2.9
3,456,114	+		IAI47_16300	0.87	-0.1
3,456,114	+		IAI47_16300	0.87	+2.2
3,456,114	+		IAI47_16300	0.87	-0.1
3,456,114	+		IAI47_16300	0.87	+0.8
3,456,114	+		IAI47_16300	0.87	+1.2
3,456,114	+		IAI47_16300	0.87	-0.4
3,456,114	+		IAI47_16300	0.87	-1.2
3,456,114	+		IAI47_16300	0.87	+0.2
3,456,114	+		IAI47_16300	0.87	+1.4
3,456,114	+		IAI47_16300	0.87	-1.9
3,456,114	+		IAI47_16300	0.87	-0.9
3,456,114	+		IAI47_16300	0.87	+0.8
3,456,114	+		IAI47_16300	0.87	+0.1
3,456,115	-		IAI47_16300	0.87	-0.1
3,456,115	-		IAI47_16300	0.87	-0.2
3,456,115	-		IAI47_16300	0.87	+1.4
3,456,115	-		IAI47_16300	0.87	-2.2
3,456,115	-		IAI47_16300	0.87	-0.4
3,456,327	+		IAI47_16305	0.11	+0.8
3,456,327	+		IAI47_16305	0.11	+0.4
3,456,327	+		IAI47_16305	0.11	+0.4
3,456,327	+		IAI47_16305	0.11	-0.1
3,456,327	+		IAI47_16305	0.11	-1.1
3,456,327	+		IAI47_16305	0.11	-1.9
3,456,328	-		IAI47_16305	0.12	+0.8
3,456,328	-		IAI47_16305	0.12	+1.9
3,456,328	-		IAI47_16305	0.12	+0.8
3,456,329	+		IAI47_16305	0.12	-0.7
3,456,330	-		IAI47_16305	0.12	+1.6
3,456,330	-		IAI47_16305	0.12	-0.9
3,456,330	-		IAI47_16305	0.12	+0.1
3,456,330	-		IAI47_16305	0.12	-1.0
3,456,416	+		IAI47_16305	0.20	-0.7
3,456,416	+		IAI47_16305	0.20	+0.5
3,456,445	+		IAI47_16305	0.23	-3.0
3,456,446	-		IAI47_16305	0.23	+0.1
3,456,446	-		IAI47_16305	0.23	-0.8
3,456,446	-		IAI47_16305	0.23	-0.4
3,456,446	-		IAI47_16305	0.23	+0.9
3,456,458	+		IAI47_16305	0.24	-0.2
3,456,458	+		IAI47_16305	0.24	+0.5
3,456,459	-		IAI47_16305	0.24	-1.6
3,456,481	+		IAI47_16305	0.27	+1.8
3,456,481	+		IAI47_16305	0.27	-0.0
3,456,481	+		IAI47_16305	0.27	-0.9
3,456,482	-		IAI47_16305	0.27	+0.2
3,456,482	-		IAI47_16305	0.27	-2.2
3,456,482	-		IAI47_16305	0.27	-0.3