Strain Fitness in Pantoea sp. MT58 around IAI47_15860

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,346,845	+		IAI47_15855	0.33	-1.8
3,346,920	-		IAI47_15855	0.38	+1.7
3,346,938	+		IAI47_15855	0.39	-0.7
3,346,939	-		IAI47_15855	0.39	+0.5
3,346,981	+		IAI47_15855	0.42	-1.9
3,346,981	+		IAI47_15855	0.42	-0.0
3,346,982	-		IAI47_15855	0.42	+0.9
3,347,007	+		IAI47_15855	0.44	+2.6
3,347,007	+		IAI47_15855	0.44	-1.8
3,347,008	-		IAI47_15855	0.44	+1.3
3,347,008	-		IAI47_15855	0.44	-0.2
3,347,008	-		IAI47_15855	0.44	-2.1
3,347,008	-		IAI47_15855	0.44	-1.3
3,347,008	-		IAI47_15855	0.44	-0.4
3,347,008	-		IAI47_15855	0.44	-0.8
3,347,008	-		IAI47_15855	0.44	+0.8
3,347,093	+		IAI47_15855	0.50	-1.4
3,347,094	-		IAI47_15855	0.51	+2.4
3,347,094	-		IAI47_15855	0.51	+0.2
3,347,104	+		IAI47_15855	0.51	-0.2
3,347,105	-		IAI47_15855	0.51	+0.2
3,347,105	-		IAI47_15855	0.51	+0.1
3,347,105	-		IAI47_15855	0.51	+0.3
3,347,105	-		IAI47_15855	0.51	-0.1
3,347,105	-		IAI47_15855	0.51	+1.9
3,347,105	-		IAI47_15855	0.51	+0.6
3,347,116	+		IAI47_15855	0.52	+1.2
3,347,116	+		IAI47_15855	0.52	+2.5
3,347,197	+		IAI47_15855	0.58	-0.4
3,347,350	+		IAI47_15855	0.69	+1.2
3,347,350	+		IAI47_15855	0.69	-1.9
3,347,350	+		IAI47_15855	0.69	+1.2
3,347,350	+		IAI47_15855	0.69	-0.2
3,347,350	+		IAI47_15855	0.69	-1.2
3,347,350	+		IAI47_15855	0.69	-0.5
3,347,351	-		IAI47_15855	0.69	+0.7
3,347,351	-		IAI47_15855	0.69	+0.2
3,347,351	-		IAI47_15855	0.69	-1.4
3,347,498	+		IAI47_15855	0.80	+1.4
3,347,498	+		IAI47_15855	0.80	-0.1
3,347,498	+		IAI47_15855	0.80	+3.5
3,347,498	+		IAI47_15855	0.80	+0.7
3,347,498	+		IAI47_15855	0.80	+0.2
3,347,498	+		IAI47_15855	0.80	+1.5
3,347,570	+		IAI47_15855	0.85	-0.3
3,347,598	+		IAI47_15855	0.87	+0.5
3,347,609	-		IAI47_15855	0.88	+0.2
3,347,609	-		IAI47_15855	0.88	+0.0
3,347,709	+				-0.2
3,347,709	+				+0.7
3,347,710	-				-0.6
3,347,718	+				-1.9
3,347,718	+				-1.6
3,347,731	+				-0.1
3,347,732	-				+0.2
3,347,777	+				-0.7
3,347,788	+				-1.4
3,347,789	-				+0.8
3,347,789	-				-0.7
3,347,789	-				-0.6
3,347,789	-				+0.8
3,347,824	+				+0.5
3,347,824	+				+0.2
3,347,825	-				-0.9
3,347,839	+				+1.1
3,347,840	-				+1.3
3,347,840	-				-0.4
3,347,840	-				+0.4
3,347,846	+				+0.6
3,348,067	+		IAI47_15860	0.25	-0.5
3,348,067	+		IAI47_15860	0.25	+0.1
3,348,067	+		IAI47_15860	0.25	+0.0
3,348,067	+		IAI47_15860	0.25	+0.6
3,348,068	-		IAI47_15860	0.25	-0.1
3,348,068	-		IAI47_15860	0.25	+1.2
3,348,068	-		IAI47_15860	0.25	+0.8
3,348,085	+		IAI47_15860	0.26	-0.7
3,348,085	+		IAI47_15860	0.26	+1.1
3,348,148	-		IAI47_15860	0.31	-1.8
3,348,148	-		IAI47_15860	0.31	+1.8
3,348,166	+		IAI47_15860	0.33	+0.5
3,348,166	+		IAI47_15860	0.33	+0.1
3,348,166	+		IAI47_15860	0.33	-0.2
3,348,166	+		IAI47_15860	0.33	-1.0
3,348,166	+		IAI47_15860	0.33	+1.9
3,348,167	-		IAI47_15860	0.33	-0.4
3,348,167	-		IAI47_15860	0.33	+0.0
3,348,167	-		IAI47_15860	0.33	-0.2
3,348,167	-		IAI47_15860	0.33	+0.2
3,348,167	-		IAI47_15860	0.33	-0.9
3,348,167	-		IAI47_15860	0.33	+0.4
3,348,167	-		IAI47_15860	0.33	-2.2
3,348,167	-		IAI47_15860	0.33	+1.1
3,348,349	-		IAI47_15860	0.48	+0.6
3,348,349	-		IAI47_15860	0.48	-1.4
3,348,401	-		IAI47_15860	0.52	-2.9
3,348,401	-		IAI47_15860	0.52	+2.2
3,348,401	-		IAI47_15860	0.52	-1.8
3,348,401	-		IAI47_15860	0.52	-0.2
3,348,576	+		IAI47_15860	0.67	+3.7
3,348,576	+		IAI47_15860	0.67	+0.2
3,348,576	+		IAI47_15860	0.67	-0.7
3,348,576	+		IAI47_15860	0.67	-0.4
3,348,577	-		IAI47_15860	0.67	-2.2
3,348,577	-		IAI47_15860	0.67	-2.6
3,348,577	-		IAI47_15860	0.67	-0.5
3,348,577	-		IAI47_15860	0.67	+0.7
3,348,577	-		IAI47_15860	0.67	-0.6
3,348,577	-		IAI47_15860	0.67	+1.3
3,348,577	-		IAI47_15860	0.67	+0.8
3,348,577	-		IAI47_15860	0.67	+0.7
3,348,578	+		IAI47_15860	0.67	+0.2
3,348,619	+		IAI47_15860	0.71	-1.5
3,348,628	+		IAI47_15860	0.71	-1.1
3,348,643	+		IAI47_15860	0.73	-0.7
3,348,643	+		IAI47_15860	0.73	+0.1
3,348,643	+		IAI47_15860	0.73	-3.1
3,348,643	+		IAI47_15860	0.73	-0.0
3,348,644	-		IAI47_15860	0.73	-2.3
3,348,644	-		IAI47_15860	0.73	+1.9
3,348,644	-		IAI47_15860	0.73	+0.1
3,348,644	-		IAI47_15860	0.73	+0.1
3,348,644	-		IAI47_15860	0.73	-0.9
3,348,644	-		IAI47_15860	0.73	+0.4
3,348,695	+		IAI47_15860	0.77	-0.3
3,348,695	+		IAI47_15860	0.77	-0.2
3,348,695	+		IAI47_15860	0.77	+1.8
3,348,695	+		IAI47_15860	0.77	-1.4
3,348,695	+		IAI47_15860	0.77	+0.6
3,348,695	+		IAI47_15860	0.77	-0.1
3,348,695	+		IAI47_15860	0.77	-2.2
3,348,695	+		IAI47_15860	0.77	+0.2
3,348,695	+		IAI47_15860	0.77	+0.9
3,348,695	+		IAI47_15860	0.77	-0.5
3,348,695	+		IAI47_15860	0.77	+1.6
3,348,696	-		IAI47_15860	0.77	+0.3
3,348,696	-		IAI47_15860	0.77	-1.1
3,348,696	-		IAI47_15860	0.77	-0.4
3,348,696	-		IAI47_15860	0.77	+2.3
3,348,696	-		IAI47_15860	0.77	-1.6
3,348,696	-		IAI47_15860	0.77	-0.2
3,348,754	+		IAI47_15860	0.82	+1.4
3,348,754	+		IAI47_15860	0.82	-1.2
3,348,755	-		IAI47_15860	0.82	-1.2
3,348,755	-		IAI47_15860	0.82	+2.6
3,348,755	-		IAI47_15860	0.82	-1.6
3,348,933	+				+0.8
3,348,933	+				+0.1
3,348,933	+				-1.6
3,348,933	+				-2.2
3,348,933	+				-0.2
3,348,933	+				+0.3
3,348,933	+				+1.9
3,348,933	+				-0.3
3,348,933	+				+1.5
3,348,933	+				-0.8
3,348,933	+				-0.3
3,348,933	+				+1.0
3,348,933	+				+1.7
3,348,934	-				+2.1
3,348,934	-				-0.6
3,348,934	-				-0.5
3,348,934	-				-0.6
3,348,934	-				+0.1
3,348,934	-				-2.2
3,348,969	+				+1.6
3,349,080	+				-1.9
3,349,081	-				+0.2
3,349,084	+				-0.4
3,349,084	+				-0.1
3,349,084	+				-0.7
3,349,084	+				-0.2
3,349,084	+				+0.5
3,349,084	+				+0.8
3,349,084	+				+0.3
3,349,084	+				+1.3
3,349,085	-				+2.1
3,349,085	-				+2.0
3,349,085	-				-0.2
3,349,085	-				+2.2
3,349,085	-				+0.6
3,349,085	-				-1.8
3,349,146	+		IAI47_15865	0.14	+2.5
3,349,146	+		IAI47_15865	0.14	-1.1
3,349,147	-		IAI47_15865	0.15	+1.0
3,349,147	-		IAI47_15865	0.15	+3.8
3,349,147	-		IAI47_15865	0.15	+0.2
3,349,237	+		IAI47_15865	0.23	+2.7
3,349,238	-		IAI47_15865	0.23	-0.5
3,349,238	-		IAI47_15865	0.23	+0.5
3,349,401	+		IAI47_15865	0.39	-0.1
3,349,402	-		IAI47_15865	0.39	-2.4
3,349,455	+		IAI47_15865	0.44	+0.6
3,349,455	+		IAI47_15865	0.44	-0.9
3,349,455	+		IAI47_15865	0.44	-0.2
3,349,455	+		IAI47_15865	0.44	+0.6
3,349,455	+		IAI47_15865	0.44	-0.5
3,349,455	+		IAI47_15865	0.44	-1.5
3,349,455	+		IAI47_15865	0.44	+0.3
3,349,456	-		IAI47_15865	0.44	-1.6
3,349,456	-		IAI47_15865	0.44	+0.6
3,349,456	-		IAI47_15865	0.44	+0.6
3,349,456	-		IAI47_15865	0.44	+1.0
3,349,456	-		IAI47_15865	0.44	+1.3
3,349,456	-		IAI47_15865	0.44	+0.9
3,349,515	-		IAI47_15865	0.50	+2.6
3,349,583	+		IAI47_15865	0.56	+1.8
3,349,583	+		IAI47_15865	0.56	+1.0
3,349,584	-		IAI47_15865	0.56	-1.4
3,349,636	+		IAI47_15865	0.61	+0.3
3,349,636	+		IAI47_15865	0.61	+0.4
3,349,662	-		IAI47_15865	0.64	+1.3
3,349,662	-		IAI47_15865	0.64	-2.3
3,349,662	-		IAI47_15865	0.64	-0.5
3,349,662	-		IAI47_15865	0.64	+1.3
3,349,662	-		IAI47_15865	0.64	+0.9
3,349,688	+		IAI47_15865	0.66	+1.9
3,349,704	-		IAI47_15865	0.68	+1.2
3,349,704	-		IAI47_15865	0.68	+1.9
3,349,739	+		IAI47_15865	0.71	-1.2
3,349,739	+		IAI47_15865	0.71	+0.2
3,349,739	+		IAI47_15865	0.71	+0.8
3,349,739	+		IAI47_15865	0.71	+0.4
3,349,740	-		IAI47_15865	0.71	-0.3
3,349,740	-		IAI47_15865	0.71	-0.2
3,349,740	-		IAI47_15865	0.71	+2.0
3,349,740	-		IAI47_15865	0.71	+1.8
3,349,748	+		IAI47_15865	0.72	+0.2
3,349,748	+		IAI47_15865	0.72	-0.1
3,349,748	+		IAI47_15865	0.72	-0.2
3,349,749	-		IAI47_15865	0.72	+1.8
3,349,801	+		IAI47_15865	0.77	-1.5
3,349,801	+		IAI47_15865	0.77	+0.8
3,349,802	-		IAI47_15865	0.77	+0.1
3,349,820	+		IAI47_15865	0.79	-1.3
3,349,820	+		IAI47_15865	0.79	+1.4
3,349,821	-		IAI47_15865	0.79	-0.2
3,349,821	-		IAI47_15865	0.79	-0.7
3,349,821	-		IAI47_15865	0.79	-0.8
3,349,826	+		IAI47_15865	0.80	-0.7
3,349,827	-		IAI47_15865	0.80	+2.0
3,349,827	-		IAI47_15865	0.80	+0.5
3,349,877	+		IAI47_15865	0.85	+1.5
3,349,877	+		IAI47_15865	0.85	-0.1
3,349,878	-		IAI47_15865	0.85	+2.2
3,349,878	-		IAI47_15865	0.85	+0.9
3,349,878	-		IAI47_15865	0.85	+1.4
3,349,931	+		IAI47_15865	0.90	+0.3
3,349,931	+		IAI47_15865	0.90	-0.1
3,349,931	+		IAI47_15865	0.90	+0.9
3,349,931	+		IAI47_15865	0.90	-0.1
3,349,931	+		IAI47_15865	0.90	+0.3
3,349,932	-		IAI47_15865	0.90	+0.1
3,349,932	-		IAI47_15865	0.90	+1.2
3,349,932	-		IAI47_15865	0.90	+0.8
3,349,932	-		IAI47_15865	0.90	-1.1