Strain Fitness in Pantoea sp. MT58 around IAI47_14065

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,970,874	-				+0.9
2,970,902	-				+0.2
2,970,902	-				-1.0
2,970,902	-				+0.9
2,970,902	-				-0.8
2,970,902	-				+1.3
2,970,967	+				-0.2
2,970,993	-				-0.7
2,970,999	+				+2.6
2,971,006	+				-0.3
2,971,006	+				-2.5
2,971,007	-				+1.0
2,971,007	-				-0.6
2,971,019	+				+2.8
2,971,057	-		IAI47_14060	0.15	-1.9
2,971,089	-		IAI47_14060	0.31	+1.7
2,971,089	-		IAI47_14060	0.31	+0.6
2,971,089	-		IAI47_14060	0.31	+2.4
2,971,121	+		IAI47_14060	0.47	-1.0
2,971,122	-		IAI47_14060	0.47	-1.7
2,971,167	-		IAI47_14060	0.69	-0.2
2,971,180	-		IAI47_14060	0.75	+0.1
2,971,185	-		IAI47_14060	0.78	+1.5
2,971,185	-		IAI47_14060	0.78	+0.2
2,971,185	-		IAI47_14060	0.78	-1.0
2,971,185	-		IAI47_14060	0.78	+0.4
2,971,214	+				+0.8
2,971,215	-				-0.5
2,971,215	-				+1.8
2,971,215	-				+0.1
2,971,215	-				-0.9
2,971,215	-				+1.2
2,971,215	-				+0.2
2,971,220	+				-2.5
2,971,221	-				+1.2
2,971,221	-				+2.0
2,971,221	-				+0.1
2,971,221	-				-1.0
2,971,221	-				+2.2
2,971,221	-				-1.1
2,971,229	+				-1.4
2,971,229	+				+1.3
2,971,229	+				-0.4
2,971,229	+				-1.4
2,971,230	-				+2.9
2,971,230	-				+0.6
2,971,230	-				-1.7
2,971,230	-				+1.2
2,971,230	-				-1.4
2,971,230	-				-0.8
2,971,230	-				+1.3
2,971,230	-				+2.1
2,971,233	+				-1.1
2,971,234	-				-0.3
2,971,246	+				-0.2
2,971,247	-				+0.9
2,971,247	-				+2.3
2,971,272	-				-0.4
2,971,308	-				+1.2
2,971,336	+				-0.1
2,971,336	+				+1.2
2,971,336	+				+0.0
2,971,336	+				+0.8
2,971,336	+				-0.5
2,971,336	+				+1.3
2,971,336	+				+0.1
2,971,337	-				+0.9
2,971,337	-				+0.6
2,971,337	-				-0.9
2,971,337	-				-1.1
2,971,337	-				-1.3
2,971,337	-				-0.4
2,971,337	-				+0.9
2,971,337	-				-0.2
2,971,337	-				-0.9
2,971,340	+				+0.1
2,971,340	+				-0.9
2,971,340	+				-1.7
2,971,340	+				+0.3
2,971,340	+				-2.1
2,971,340	+				+0.7
2,971,399	+				+0.0
2,971,399	+				-0.1
2,971,399	+				+0.8
2,971,399	+				-1.2
2,971,399	+				-0.6
2,971,399	+				-1.9
2,971,399	+				+1.0
2,971,400	-				-0.8
2,971,400	-				-0.0
2,971,400	-				-1.6
2,971,464	+				+0.7
2,971,499	+		IAI47_14065	0.12	+0.2
2,971,499	+		IAI47_14065	0.12	+0.9
2,971,499	+		IAI47_14065	0.12	+0.8
2,971,499	+		IAI47_14065	0.12	-2.0
2,971,499	+		IAI47_14065	0.12	-0.1
2,971,499	+		IAI47_14065	0.12	+0.3
2,971,499	+		IAI47_14065	0.12	+0.0
2,971,500	-		IAI47_14065	0.12	-1.6
2,971,500	-		IAI47_14065	0.12	+2.2
2,971,500	-		IAI47_14065	0.12	+0.8
2,971,500	-		IAI47_14065	0.12	-2.2
2,971,500	-		IAI47_14065	0.12	-1.9
2,971,567	+		IAI47_14065	0.21	-0.9
2,971,568	-		IAI47_14065	0.21	-0.6
2,971,568	-		IAI47_14065	0.21	+0.9
2,971,600	+		IAI47_14065	0.25	-0.5
2,971,600	+		IAI47_14065	0.25	-0.2
2,971,600	+		IAI47_14065	0.25	+0.7
2,971,600	+		IAI47_14065	0.25	-0.3
2,971,600	+		IAI47_14065	0.25	+0.9
2,971,601	-		IAI47_14065	0.25	+0.8
2,971,601	-		IAI47_14065	0.25	+0.6
2,971,601	-		IAI47_14065	0.25	-1.1
2,971,601	-		IAI47_14065	0.25	-0.5
2,971,601	-		IAI47_14065	0.25	+1.2
2,971,601	-		IAI47_14065	0.25	-1.2
2,971,601	-		IAI47_14065	0.25	-0.1
2,971,602	+		IAI47_14065	0.25	-2.2
2,971,602	+		IAI47_14065	0.25	-1.4
2,971,602	+		IAI47_14065	0.25	+1.2
2,971,602	+		IAI47_14065	0.25	-0.0
2,971,602	+		IAI47_14065	0.25	-0.5
2,971,602	+		IAI47_14065	0.25	-0.1
2,971,602	+		IAI47_14065	0.25	-0.5
2,971,602	+		IAI47_14065	0.25	+0.2
2,971,602	+		IAI47_14065	0.25	+0.4
2,971,602	+		IAI47_14065	0.25	+0.5
2,971,602	+		IAI47_14065	0.25	+0.2
2,971,603	-		IAI47_14065	0.25	+0.2
2,971,603	-		IAI47_14065	0.25	+0.7
2,971,603	-		IAI47_14065	0.25	-1.5
2,971,603	-		IAI47_14065	0.25	-0.6
2,971,603	-		IAI47_14065	0.25	+0.8
2,971,603	-		IAI47_14065	0.25	+0.6
2,971,603	-		IAI47_14065	0.25	-0.7
2,971,603	-		IAI47_14065	0.25	-1.1
2,971,603	-		IAI47_14065	0.25	-0.5
2,971,638	-		IAI47_14065	0.30	+0.6
2,971,749	+		IAI47_14065	0.44	+0.2
2,971,749	+		IAI47_14065	0.44	-0.6
2,971,749	+		IAI47_14065	0.44	-1.0
2,971,749	+		IAI47_14065	0.44	-1.3
2,971,749	+		IAI47_14065	0.44	+3.4
2,971,749	+		IAI47_14065	0.44	-0.9
2,971,749	+		IAI47_14065	0.44	-0.5
2,971,749	+		IAI47_14065	0.44	+1.2
2,971,749	+		IAI47_14065	0.44	-1.2
2,971,749	+		IAI47_14065	0.44	-0.5
2,971,749	+		IAI47_14065	0.44	-1.4
2,971,750	-		IAI47_14065	0.44	-2.2
2,971,750	-		IAI47_14065	0.44	+1.2
2,971,750	-		IAI47_14065	0.44	+0.1
2,971,750	-		IAI47_14065	0.44	-1.4
2,971,750	-		IAI47_14065	0.44	-0.2
2,971,750	-		IAI47_14065	0.44	+0.4
2,971,750	-		IAI47_14065	0.44	+0.8
2,971,750	-		IAI47_14065	0.44	+1.2
2,971,750	-		IAI47_14065	0.44	+0.2
2,971,750	-		IAI47_14065	0.44	+1.0
2,971,760	+		IAI47_14065	0.45	+1.8
2,971,774	+		IAI47_14065	0.47	-1.2
2,971,774	+		IAI47_14065	0.47	+1.7
2,971,851	+		IAI47_14065	0.57	-0.2
2,971,851	+		IAI47_14065	0.57	+0.8
2,971,852	-		IAI47_14065	0.57	-0.6
2,971,852	-		IAI47_14065	0.57	+2.8
2,971,852	-		IAI47_14065	0.57	+0.8
2,971,869	+		IAI47_14065	0.59	-1.0
2,971,869	+		IAI47_14065	0.59	-2.0
2,971,869	+		IAI47_14065	0.59	-3.4
2,971,869	+		IAI47_14065	0.59	-1.3
2,971,870	-		IAI47_14065	0.59	-0.1
2,971,870	-		IAI47_14065	0.59	+1.0
2,971,879	+		IAI47_14065	0.60	-1.4
2,971,879	+		IAI47_14065	0.60	+0.7
2,971,879	+		IAI47_14065	0.60	-1.6
2,971,907	+		IAI47_14065	0.64	+0.9
2,971,907	+		IAI47_14065	0.64	+0.1
2,971,908	-		IAI47_14065	0.64	-1.5
2,971,908	-		IAI47_14065	0.64	+0.9
2,971,908	-		IAI47_14065	0.64	-1.0
2,971,921	+		IAI47_14065	0.66	-0.4
2,971,921	+		IAI47_14065	0.66	-1.3
2,971,921	+		IAI47_14065	0.66	+0.0
2,971,921	+		IAI47_14065	0.66	+1.0
2,971,921	+		IAI47_14065	0.66	-1.6
2,971,922	-		IAI47_14065	0.66	-1.0
2,971,952	+		IAI47_14065	0.70	+2.0
2,971,952	+		IAI47_14065	0.70	-1.8
2,971,952	+		IAI47_14065	0.70	-1.3
2,971,952	+		IAI47_14065	0.70	+2.1
2,971,953	-		IAI47_14065	0.70	+3.6
2,971,953	-		IAI47_14065	0.70	+0.5
2,971,954	+		IAI47_14065	0.70	+2.1
2,971,954	+		IAI47_14065	0.70	-0.0
2,971,954	+		IAI47_14065	0.70	+0.2
2,971,954	+		IAI47_14065	0.70	+3.2
2,971,969	+		IAI47_14065	0.72	-0.5
2,971,970	-		IAI47_14065	0.72	-0.1
2,971,970	-		IAI47_14065	0.72	-1.9
2,971,970	-		IAI47_14065	0.72	-0.9
2,971,999	+		IAI47_14065	0.76	+0.8
2,971,999	+		IAI47_14065	0.76	-0.8
2,971,999	+		IAI47_14065	0.76	-1.0
2,972,000	-		IAI47_14065	0.76	+1.1
2,972,000	-		IAI47_14065	0.76	-0.4
2,972,000	-		IAI47_14065	0.76	+1.2
2,972,050	+		IAI47_14065	0.82	+2.2
2,972,051	-		IAI47_14065	0.82	-1.1
2,972,051	-		IAI47_14065	0.82	+0.3
2,972,051	-		IAI47_14065	0.82	-0.2
2,972,053	+		IAI47_14065	0.82	-0.2
2,972,054	-		IAI47_14065	0.83	+0.6
2,972,054	-		IAI47_14065	0.83	+0.2
2,972,134	+				-2.3
2,972,134	+				+0.0
2,972,134	+				+1.1
2,972,134	+				-0.2
2,972,134	+				+0.2
2,972,135	-				+1.9
2,972,135	-				+0.4
2,972,135	-				-1.5
2,972,135	-				+0.3
2,972,250	+				-1.4
2,972,250	+				-1.8
2,972,251	-				+0.6
2,972,251	-				-2.0
2,972,251	-				-0.8
2,972,306	+				-1.0
2,972,329	-				+0.0
2,972,355	-				+0.5
2,972,355	-				-0.4
2,972,387	-				-0.6
2,972,387	-				-0.5
2,972,387	-				-2.0
2,972,387	-				+1.1
2,972,389	-				-0.6
2,972,389	-				+0.2
2,972,389	-				+0.3
2,972,396	+				+0.5
2,972,396	+				-0.1
2,972,396	+				+0.4
2,972,403	+				-0.1
2,972,411	-				-0.4
2,972,426	+				-0.5
2,972,427	-				-0.6
2,972,427	-				+1.2
2,972,429	+				+0.4
2,972,429	+				-1.4
2,972,430	-				+0.6
2,972,436	-				-0.6
2,972,479	+				+0.4
2,972,479	+				-0.9
2,972,480	-				-1.4
2,972,480	-				+0.2
2,972,508	+				+1.9
2,972,509	-				+0.8
2,972,540	+				-1.4
2,972,540	+				-0.4
2,972,540	+				+0.7
2,972,540	+				+1.8
2,972,541	-				-0.6
2,972,541	-				-0.2
2,972,541	-				+0.6
2,972,541	-				+1.4
2,972,560	+				+0.6
2,972,560	+				+0.9
2,972,560	+				+0.6
2,972,560	+				+1.0
2,972,561	-				+0.3
2,972,561	-				-0.7
2,972,561	-				+2.8
2,972,561	-				+0.2
2,972,599	+				-1.0
2,972,600	-				+1.9
2,972,613	+				+0.9
2,972,613	+				+0.1
2,972,613	+				+0.6
2,972,613	+				+0.8
2,972,613	+				+0.8
2,972,614	-				-0.7
2,972,614	-				-0.8
2,972,680	-				-1.0
2,972,680	-				-1.3
2,972,680	-				+0.5
2,972,712	-				+1.0
2,972,719	+				+0.4
2,972,719	+				-1.1
2,972,720	-				+3.3
2,972,720	-				-1.2
2,972,720	-				+0.1
2,972,720	-				+0.2
2,972,737	+		IAI47_14070	0.11	-0.1
2,972,737	+		IAI47_14070	0.11	-0.1
2,972,737	+		IAI47_14070	0.11	-0.4
2,972,737	+		IAI47_14070	0.11	+0.5
2,972,737	+		IAI47_14070	0.11	-1.6
2,972,738	-		IAI47_14070	0.11	-0.9
2,972,752	+		IAI47_14070	0.14	-1.2
2,972,798	+		IAI47_14070	0.25	-0.3
2,972,798	+		IAI47_14070	0.25	+0.9
2,972,798	+		IAI47_14070	0.25	-0.5
2,972,799	-		IAI47_14070	0.25	+1.2
2,972,799	-		IAI47_14070	0.25	+1.2
2,972,799	-		IAI47_14070	0.25	+1.0
2,972,837	-		IAI47_14070	0.34	+0.5
2,972,837	-		IAI47_14070	0.34	+0.5
2,972,893	+		IAI47_14070	0.47	-1.2
2,972,893	+		IAI47_14070	0.47	-1.2
2,972,894	-		IAI47_14070	0.47	+1.0
2,972,894	-		IAI47_14070	0.47	-0.3
2,972,985	+		IAI47_14070	0.68	+0.3
2,972,986	-		IAI47_14070	0.68	-0.0
2,973,012	+		IAI47_14070	0.74	+1.6
2,973,012	+		IAI47_14070	0.74	-0.5
2,973,013	-		IAI47_14070	0.75	+0.6
2,973,056	-		IAI47_14070	0.84	+1.4
2,973,060	+		IAI47_14070	0.85	-0.8
2,973,061	-		IAI47_14070	0.86	+0.5
2,973,061	-		IAI47_14070	0.86	-1.4
2,973,061	-		IAI47_14070	0.86	-1.8
2,973,061	-		IAI47_14070	0.86	-0.4
2,973,114	+				-1.6
2,973,114	+				+0.7
2,973,114	+				-1.8
2,973,114	+				+1.0
2,973,114	+				+0.2
2,973,114	+				+0.8
2,973,115	-				-1.0
2,973,149	+				-0.5
2,973,149	+				+2.4
2,973,150	-				+0.2
2,973,150	-				-1.6
2,973,158	+				-2.9
2,973,158	+				-1.1
2,973,158	+				+0.4
2,973,158	+				+0.0
2,973,158	+				-0.2
2,973,158	+				+0.2
2,973,158	+				+0.1
2,973,158	+				+0.0
2,973,159	-				-1.1
2,973,159	-				+2.2
2,973,159	-				+0.2
2,973,159	-				-0.1
2,973,159	-				-0.2
2,973,159	-				+0.4
2,973,159	-				+0.2
2,973,159	-				-0.8
2,973,160	+				-1.2
2,973,160	+				+0.1
2,973,160	+				-1.4
2,973,160	+				+0.0
2,973,160	+				-2.6
2,973,160	+				-1.2
2,973,160	+				-0.6
2,973,160	+				+0.9
2,973,161	-				+3.1
2,973,161	-				+1.6
2,973,161	-				+0.3
2,973,161	-				-0.5
2,973,161	-				+2.1
2,973,161	-				-0.5
2,973,161	-				-1.0
2,973,161	-				+0.1
2,973,161	-				-0.0
2,973,161	-				-0.2
2,973,162	+				-0.0
2,973,163	-				+0.5
2,973,163	-				-2.0