Strain Fitness in Pantoea sp. MT58 around IAI47_10395

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,202,224	-		IAI47_10390	0.36	+2.0
2,202,329	-		IAI47_10390	0.47	-0.6
2,202,415	+		IAI47_10390	0.56	+2.7
2,202,415	+		IAI47_10390	0.56	+0.9
2,202,415	+		IAI47_10390	0.56	+3.4
2,202,416	-		IAI47_10390	0.56	+0.6
2,202,416	-		IAI47_10390	0.56	-0.5
2,202,418	-		IAI47_10390	0.56	-0.7
2,202,418	-		IAI47_10390	0.56	-1.1
2,202,418	-		IAI47_10390	0.56	+0.6
2,202,448	+		IAI47_10390	0.59	+1.3
2,202,448	+		IAI47_10390	0.59	+2.4
2,202,479	-		IAI47_10390	0.62	+0.3
2,202,589	+		IAI47_10390	0.73	+0.2
2,202,590	-		IAI47_10390	0.73	-0.4
2,202,590	-		IAI47_10390	0.73	+0.6
2,202,590	-		IAI47_10390	0.73	+0.1
2,202,674	-		IAI47_10390	0.82	-2.1
2,202,674	-		IAI47_10390	0.82	+0.7
2,202,674	-		IAI47_10390	0.82	+1.0
2,202,802	+				-2.3
2,202,803	-				+1.3
2,202,803	-				-1.0
2,202,803	-				-0.3
2,202,844	+				+0.6
2,202,844	+				-0.4
2,202,844	+				+0.8
2,202,845	-				-1.7
2,202,845	-				+0.6
2,202,845	-				+1.0
2,202,884	+				-0.7
2,202,885	-				+0.9
2,202,885	-				+0.9
2,202,885	-				-0.2
2,202,932	-				+1.6
2,202,939	+				+1.2
2,202,940	-				+1.7
2,202,952	+				+1.0
2,202,953	-				-1.0
2,202,953	-				+0.7
2,202,992	-				+0.1
2,203,029	+				-2.1
2,203,063	-				+0.1
2,203,063	-				+0.7
2,203,064	+				+0.2
2,203,065	-				+0.6
2,203,093	+				+0.9
2,203,094	-				-1.0
2,203,094	-				+1.0
2,203,094	-				+0.4
2,203,094	-				-0.4
2,203,094	-				-1.9
2,203,137	+				-0.7
2,203,138	-				-1.7
2,203,157	+				-0.1
2,203,185	+				-1.1
2,203,195	-				+1.7
2,203,195	-				+0.6
2,203,198	+				-0.3
2,203,198	+				-0.1
2,203,202	+				+0.3
2,203,202	+				-1.9
2,203,203	-				-0.2
2,203,203	-				+0.6
2,203,203	-				+1.6
2,203,203	-				-0.2
2,203,203	-				-0.7
2,203,255	-				+1.6
2,203,290	+				-1.1
2,203,290	+				+0.0
2,203,324	+				+0.5
2,203,346	+				+1.4
2,203,346	+				+0.6
2,203,346	+				+0.5
2,203,346	+				-0.4
2,203,346	+				+0.6
2,203,346	+				+0.3
2,203,346	+				+2.5
2,203,347	-				-0.4
2,203,347	-				+0.9
2,203,347	-				+2.3
2,203,348	+				-0.7
2,203,348	+				+0.5
2,203,348	+				-0.3
2,203,348	+				-0.1
2,203,349	-				+0.3
2,203,349	-				+0.7
2,203,393	+		IAI47_10395	0.10	+0.6
2,203,393	+		IAI47_10395	0.10	-0.3
2,203,393	+		IAI47_10395	0.10	+0.2
2,203,394	-		IAI47_10395	0.10	-1.1
2,203,394	-		IAI47_10395	0.10	+0.4
2,203,394	-		IAI47_10395	0.10	+1.3
2,203,395	+		IAI47_10395	0.11	-1.1
2,203,395	+				+1.7
2,203,395	+		IAI47_10395	0.11	+0.5
2,203,395	+		IAI47_10395	0.11	+1.7
2,203,395	+		IAI47_10395	0.11	+1.4
2,203,395	+		IAI47_10395	0.11	-0.1
2,203,395	+		IAI47_10395	0.11	+0.7
2,203,395	+		IAI47_10395	0.11	-0.3
2,203,395	+		IAI47_10395	0.11	-0.6
2,203,396	-		IAI47_10395	0.11	+1.3
2,203,404	+		IAI47_10395	0.11	-0.1
2,203,494	+		IAI47_10395	0.16	-1.6
2,203,596	+		IAI47_10395	0.22	-2.3
2,203,598	+		IAI47_10395	0.22	-1.3
2,203,598	+		IAI47_10395	0.22	+0.9
2,203,598	+		IAI47_10395	0.22	+0.3
2,203,598	+		IAI47_10395	0.22	+2.7
2,203,598	+		IAI47_10395	0.22	-0.7
2,203,599	-		IAI47_10395	0.22	+0.6
2,203,599	-		IAI47_10395	0.22	+1.5
2,203,599	-		IAI47_10395	0.22	-1.0
2,203,599	-		IAI47_10395	0.22	+1.0
2,203,617	+		IAI47_10395	0.24	-0.1
2,203,617	+		IAI47_10395	0.24	+1.2
2,203,617	+		IAI47_10395	0.24	-0.3
2,203,618	-		IAI47_10395	0.24	-1.1
2,203,618	-		IAI47_10395	0.24	-1.8
2,203,618	-		IAI47_10395	0.24	+0.7
2,203,618	-		IAI47_10395	0.24	-1.8
2,203,652	-				-0.1
2,203,652	-		IAI47_10395	0.26	+0.4
2,203,652	-		IAI47_10395	0.26	+1.9
2,203,660	+		IAI47_10395	0.26	+1.0
2,203,660	+		IAI47_10395	0.26	-0.1
2,203,661	-		IAI47_10395	0.26	+1.7
2,203,661	-		IAI47_10395	0.26	+0.2
2,203,661	-		IAI47_10395	0.26	+2.2
2,203,661	-		IAI47_10395	0.26	-0.3
2,203,663	-		IAI47_10395	0.26	-0.7
2,203,675	+		IAI47_10395	0.27	-0.2
2,203,675	+		IAI47_10395	0.27	-1.2
2,203,676	-		IAI47_10395	0.27	+0.4
2,203,676	-		IAI47_10395	0.27	+0.5
2,203,787	+		IAI47_10395	0.34	-1.7
2,203,809	+		IAI47_10395	0.35	+2.4
2,203,809	+		IAI47_10395	0.35	+0.2
2,203,809	+		IAI47_10395	0.35	+0.3
2,203,809	+		IAI47_10395	0.35	-0.0
2,203,809	+		IAI47_10395	0.35	+1.9
2,203,810	-		IAI47_10395	0.35	+0.6
2,203,842	+		IAI47_10395	0.37	+1.7
2,203,843	-		IAI47_10395	0.37	+0.7
2,203,843	-		IAI47_10395	0.37	+1.2
2,203,941	+		IAI47_10395	0.43	+1.1
2,203,941	+		IAI47_10395	0.43	+1.2
2,203,942	-		IAI47_10395	0.43	-0.8
2,203,963	-		IAI47_10395	0.44	-0.1
2,203,963	-		IAI47_10395	0.44	+0.5
2,203,963	-		IAI47_10395	0.44	-0.8
2,204,076	+		IAI47_10395	0.50	-0.8
2,204,077	-		IAI47_10395	0.51	+1.6
2,204,077	-		IAI47_10395	0.51	+0.6
2,204,083	+		IAI47_10395	0.51	+3.5
2,204,083	+		IAI47_10395	0.51	-1.1
2,204,083	+		IAI47_10395	0.51	-0.1
2,204,083	+		IAI47_10395	0.51	+1.6
2,204,084	-		IAI47_10395	0.51	+2.0
2,204,084	-		IAI47_10395	0.51	-1.1
2,204,084	-		IAI47_10395	0.51	-1.7
2,204,085	+		IAI47_10395	0.51	-1.7
2,204,085	+		IAI47_10395	0.51	+1.5
2,204,085	+		IAI47_10395	0.51	+0.6
2,204,085	+		IAI47_10395	0.51	+0.1
2,204,086	-		IAI47_10395	0.51	-0.0
2,204,086	-		IAI47_10395	0.51	+3.3
2,204,086	-		IAI47_10395	0.51	+1.0
2,204,086	-		IAI47_10395	0.51	+1.7
2,204,086	-		IAI47_10395	0.51	-0.3
2,204,086	-		IAI47_10395	0.51	+0.3
2,204,244	+		IAI47_10395	0.60	-0.1
2,204,244	+		IAI47_10395	0.60	+0.7
2,204,244	+		IAI47_10395	0.60	-0.8
2,204,245	-		IAI47_10395	0.60	-1.3
2,204,245	-		IAI47_10395	0.60	+0.4
2,204,245	-		IAI47_10395	0.60	-0.4
2,204,248	+		IAI47_10395	0.61	+0.4
2,204,248	+		IAI47_10395	0.61	+0.9
2,204,248	+		IAI47_10395	0.61	+4.0
2,204,248	+		IAI47_10395	0.61	-0.1
2,204,248	+		IAI47_10395	0.61	-0.3
2,204,248	+		IAI47_10395	0.61	+2.2
2,204,249	-		IAI47_10395	0.61	+0.5
2,204,249	-		IAI47_10395	0.61	+0.9
2,204,249	-		IAI47_10395	0.61	+0.1
2,204,249	-				+1.7
2,204,249	-		IAI47_10395	0.61	-2.1
2,204,249	-		IAI47_10395	0.61	-0.9
2,204,249	-		IAI47_10395	0.61	+0.6
2,204,249	-		IAI47_10395	0.61	-1.7
2,204,249	-		IAI47_10395	0.61	+0.2
2,204,249	-		IAI47_10395	0.61	+0.1
2,204,282	+		IAI47_10395	0.63	+1.3
2,204,282	+		IAI47_10395	0.63	+0.9
2,204,282	+		IAI47_10395	0.63	+0.1
2,204,282	+		IAI47_10395	0.63	-2.0
2,204,283	-		IAI47_10395	0.63	-1.3
2,204,283	-		IAI47_10395	0.63	-0.1
2,204,283	-		IAI47_10395	0.63	+0.6
2,204,349	+		IAI47_10395	0.66	+1.6
2,204,350	-		IAI47_10395	0.67	+1.3
2,204,350	-		IAI47_10395	0.67	+0.3
2,204,358	-		IAI47_10395	0.67	+0.6
2,204,405	+		IAI47_10395	0.70	+0.6
2,204,405	+		IAI47_10395	0.70	+0.7
2,204,405	+		IAI47_10395	0.70	+1.3
2,204,467	-		IAI47_10395	0.73	+0.4
2,204,547	+		IAI47_10395	0.78	+0.9
2,204,629	-		IAI47_10395	0.83	-0.1
2,204,629	-		IAI47_10395	0.83	+1.0
2,204,667	+		IAI47_10395	0.85	-0.4
2,204,819	-				-2.1
2,204,830	+				-0.8
2,204,830	+				-0.7
2,204,831	-				+0.0
2,204,831	-				-0.3
2,204,840	-				-1.6
2,204,872	+				+0.2
2,204,872	+				+0.9
2,204,872	+				+0.2
2,204,872	+				-1.1
2,204,917	+				+2.3
2,204,917	+				+0.5
2,204,917	+				+0.2
2,204,918	-				+2.3
2,204,918	-				+0.2
2,204,966	+				-0.3
2,204,966	+				-1.1
2,204,967	-				-0.5
2,204,976	-				-0.3
2,204,976	-				+0.4
2,204,976	-				-1.0
2,204,976	-				+1.2
2,204,987	-				-0.7
2,205,080	+				-0.5
2,205,081	-				+1.0
2,205,085	+				-0.1
2,205,085	+				+2.0
2,205,086	-				+1.4
2,205,090	+				+0.2
2,205,090	+				+0.4
2,205,090	+				-2.3
2,205,090	+				+0.2
2,205,091	-				-1.8
2,205,122	+				-0.7
2,205,123	-				-2.1
2,205,138	+				-0.3
2,205,141	+				-0.1
2,205,142	-				+0.5
2,205,159	-				+0.6
2,205,178	-				-1.3
2,205,178	-				-2.0
2,205,193	+				+0.2
2,205,194	-				+0.5
2,205,235	+				-1.0
2,205,236	-				-0.9
2,205,250	+				-0.0
2,205,250	+				+1.7
2,205,251	-				+0.2
2,205,320	+		IAI47_10400	0.13	-0.1
2,205,320	+		IAI47_10400	0.13	+0.1
2,205,320	+		IAI47_10400	0.13	+1.8
2,205,320	+		IAI47_10400	0.13	+2.0
2,205,321	-		IAI47_10400	0.13	+1.2
2,205,324	+		IAI47_10400	0.13	+0.4
2,205,324	+		IAI47_10400	0.13	+0.9
2,205,324	+		IAI47_10400	0.13	+3.7
2,205,325	-		IAI47_10400	0.13	+0.3
2,205,350	+		IAI47_10400	0.15	+3.0
2,205,350	+		IAI47_10400	0.15	-0.7
2,205,350	+		IAI47_10400	0.15	-0.3
2,205,350	+		IAI47_10400	0.15	+0.7
2,205,351	-		IAI47_10400	0.15	+0.2
2,205,410	+		IAI47_10400	0.19	-0.1
2,205,479	+		IAI47_10400	0.24	+0.2
2,205,479	+		IAI47_10400	0.24	+0.8
2,205,479	+		IAI47_10400	0.24	-0.7
2,205,479	+		IAI47_10400	0.24	-0.6
2,205,702	-		IAI47_10400	0.39	+1.6
2,205,816	+		IAI47_10400	0.46	-1.0
2,205,816	+		IAI47_10400	0.46	-0.7
2,205,816	+		IAI47_10400	0.46	+0.8
2,205,817	-		IAI47_10400	0.46	-0.7
2,205,836	+		IAI47_10400	0.48	-0.3