Strain Fitness in Pantoea sp. MT58 around IAI47_09880

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,090,789	-		IAI47_09875	0.14	+0.8
2,090,828	+		IAI47_09875	0.18	-0.8
2,090,829	-		IAI47_09875	0.18	+1.2
2,090,829	-		IAI47_09875	0.18	-0.8
2,090,869	+		IAI47_09875	0.22	-0.0
2,090,933	+		IAI47_09875	0.28	+2.5
2,090,933	+		IAI47_09875	0.28	+0.1
2,090,933	+		IAI47_09875	0.28	+0.5
2,090,933	+		IAI47_09875	0.28	+0.5
2,090,934	-		IAI47_09875	0.29	-0.6
2,090,935	+		IAI47_09875	0.29	+1.4
2,090,935	+		IAI47_09875	0.29	-0.7
2,090,935	+		IAI47_09875	0.29	+1.0
2,090,935	+		IAI47_09875	0.29	-1.8
2,090,935	+		IAI47_09875	0.29	+1.7
2,090,936	-		IAI47_09875	0.29	-2.0
2,090,936	-		IAI47_09875	0.29	-0.8
2,090,936	-		IAI47_09875	0.29	-1.3
2,090,936	-		IAI47_09875	0.29	-1.2
2,091,038	+		IAI47_09875	0.39	+0.3
2,091,039	-		IAI47_09875	0.39	-1.4
2,091,040	+		IAI47_09875	0.39	-1.4
2,091,041	-		IAI47_09875	0.39	+0.8
2,091,113	-		IAI47_09875	0.46	+1.5
2,091,158	+		IAI47_09875	0.50	+1.4
2,091,158	+		IAI47_09875	0.50	+0.8
2,091,158	+		IAI47_09875	0.50	-0.5
2,091,158	+		IAI47_09875	0.50	-0.8
2,091,158	+		IAI47_09875	0.50	+1.2
2,091,159	-		IAI47_09875	0.51	+0.5
2,091,159	-		IAI47_09875	0.51	+0.6
2,091,160	+		IAI47_09875	0.51	+0.1
2,091,160	+		IAI47_09875	0.51	+1.8
2,091,160	+		IAI47_09875	0.51	-0.3
2,091,160	+		IAI47_09875	0.51	+1.8
2,091,160	+		IAI47_09875	0.51	+0.2
2,091,160	+		IAI47_09875	0.51	+2.0
2,091,160	+		IAI47_09875	0.51	-0.4
2,091,161	-		IAI47_09875	0.51	-0.3
2,091,161	-		IAI47_09875	0.51	+1.2
2,091,161	-		IAI47_09875	0.51	-0.0
2,091,161	-		IAI47_09875	0.51	+0.8
2,091,161	-		IAI47_09875	0.51	+0.3
2,091,187	+		IAI47_09875	0.53	+0.5
2,091,188	-		IAI47_09875	0.53	-0.8
2,091,188	-		IAI47_09875	0.53	-0.3
2,091,188	-		IAI47_09875	0.53	+1.9
2,091,212	+		IAI47_09875	0.56	+2.5
2,091,212	+		IAI47_09875	0.56	-0.8
2,091,213	-		IAI47_09875	0.56	+0.5
2,091,246	-		IAI47_09875	0.59	-0.2
2,091,246	-		IAI47_09875	0.59	-0.7
2,091,246	-		IAI47_09875	0.59	-0.0
2,091,327	+		IAI47_09875	0.67	+1.2
2,091,356	-		IAI47_09875	0.70	-0.8
2,091,356	-		IAI47_09875	0.70	+1.1
2,091,387	-		IAI47_09875	0.73	+1.5
2,091,449	+		IAI47_09875	0.79	+2.2
2,091,500	+		IAI47_09875	0.84	+2.8
2,091,542	+		IAI47_09875	0.88	-0.5
2,091,542	+		IAI47_09875	0.88	+1.8
2,091,542	+		IAI47_09875	0.88	-1.0
2,091,543	-		IAI47_09875	0.88	+1.0
2,091,543	-		IAI47_09875	0.88	-0.0
2,091,579	-				+0.6
2,091,579	-				-0.0
2,091,579	-				+1.2
2,091,593	+				-0.2
2,091,593	+				+0.7
2,091,662	+				-0.9
2,091,663	-				-0.2
2,091,719	-				+0.5
2,091,719	-				+0.2
2,091,747	+				+1.0
2,091,747	+				-1.0
2,091,747	+				+0.5
2,091,748	-				-2.3
2,091,748	-				-0.5
2,091,752	+				-0.8
2,091,826	-				+1.2
2,091,826	-				+1.2
2,091,871	+				+1.3
2,091,932	+				+0.9
2,091,932	+				+1.5
2,091,933	-				-0.0
2,091,933	-				-1.0
2,091,933	-				+0.5
2,091,995	+		IAI47_09880	0.11	+2.2
2,092,275	+		IAI47_09880	0.23	+1.0
2,092,352	+		IAI47_09880	0.27	+0.9
2,092,352	+		IAI47_09880	0.27	-2.0
2,092,353	-		IAI47_09880	0.27	+0.7
2,092,353	-		IAI47_09880	0.27	+1.6
2,092,353	-		IAI47_09880	0.27	+0.4
2,092,545	-		IAI47_09880	0.36	-0.4
2,092,545	-		IAI47_09880	0.36	+1.2
2,092,606	+		IAI47_09880	0.38	+0.9
2,092,607	-		IAI47_09880	0.38	+0.1
2,092,656	+		IAI47_09880	0.41	+0.1
2,092,656	+		IAI47_09880	0.41	-0.5
2,092,656	+		IAI47_09880	0.41	+0.3
2,092,657	-		IAI47_09880	0.41	-1.1
2,092,703	+		IAI47_09880	0.43	+0.8
2,093,003	+		IAI47_09880	0.56	-1.6
2,093,116	-		IAI47_09880	0.61	-1.4
2,093,124	+		IAI47_09880	0.62	-1.7
2,093,124	+		IAI47_09880	0.62	-1.4
2,093,125	-		IAI47_09880	0.62	-1.8
2,093,125	-		IAI47_09880	0.62	+1.8
2,093,125	-		IAI47_09880	0.62	-1.2
2,093,125	-		IAI47_09880	0.62	+0.2
2,093,125	-		IAI47_09880	0.62	+2.6
2,093,125	-		IAI47_09880	0.62	+0.1
2,093,166	+		IAI47_09880	0.63	-0.3
2,093,166	+		IAI47_09880	0.63	+0.5
2,093,166	+		IAI47_09880	0.63	-0.2
2,093,166	+		IAI47_09880	0.63	-1.3
2,093,167	-		IAI47_09880	0.64	-0.9
2,093,194	+		IAI47_09880	0.65	-1.0
2,093,194	+		IAI47_09880	0.65	+0.3
2,093,194	+		IAI47_09880	0.65	-0.4
2,093,194	+		IAI47_09880	0.65	-0.0
2,093,195	-		IAI47_09880	0.65	+0.2
2,093,213	+		IAI47_09880	0.66	-0.0
2,093,214	-		IAI47_09880	0.66	-2.1
2,093,235	+		IAI47_09880	0.67	+0.0
2,093,235	+		IAI47_09880	0.67	+0.8
2,093,469	+		IAI47_09880	0.77	+2.2
2,093,469	+		IAI47_09880	0.77	+0.2
2,093,469	+		IAI47_09880	0.77	-0.6
2,093,470	-		IAI47_09880	0.77	+0.5
2,093,470	-		IAI47_09880	0.77	+1.2
2,093,470	-		IAI47_09880	0.77	+0.8
2,093,470	-		IAI47_09880	0.77	+0.8
2,093,470	-		IAI47_09880	0.77	-1.1
2,093,481	+		IAI47_09880	0.78	+0.2
2,093,481	+		IAI47_09880	0.78	-0.2
2,093,481	+		IAI47_09880	0.78	+0.8
2,093,481	+		IAI47_09880	0.78	+2.8
2,093,481	+		IAI47_09880	0.78	-1.0
2,093,482	-		IAI47_09880	0.78	+2.5
2,093,482	-		IAI47_09880	0.78	+1.2
2,093,482	-		IAI47_09880	0.78	+0.3
2,093,482	-		IAI47_09880	0.78	+1.0
2,093,483	+		IAI47_09880	0.78	+0.8
2,093,484	-		IAI47_09880	0.78	+1.3
2,093,547	-		IAI47_09880	0.81	+0.8
2,093,547	-		IAI47_09880	0.81	+1.1
2,093,549	+		IAI47_09880	0.81	-0.4
2,093,549	+		IAI47_09880	0.81	+0.5
2,093,549	+		IAI47_09880	0.81	+0.3
2,093,549	+		IAI47_09880	0.81	+0.2
2,093,550	-		IAI47_09880	0.81	+0.5
2,093,597	+		IAI47_09880	0.83	+1.8
2,093,598	-		IAI47_09880	0.83	+1.6
2,093,703	+		IAI47_09880	0.88	+2.6
2,093,703	+		IAI47_09880	0.88	-0.3
2,093,703	+		IAI47_09880	0.88	+1.2
2,093,703	+		IAI47_09880	0.88	-0.0
2,093,703	+		IAI47_09880	0.88	+1.1
2,093,704	-		IAI47_09880	0.88	+3.8
2,093,704	-		IAI47_09880	0.88	+2.0
2,093,722	+		IAI47_09880	0.88	-0.4
2,093,763	+				+0.4
2,093,763	+				-0.9
2,093,764	-				+0.6
2,093,781	+				-1.9
2,093,781	+				+3.0
2,093,782	-				+0.5
2,093,782	-				-1.2
2,093,782	-				+0.5
2,093,782	-				-0.2
2,093,830	-				+0.8
2,093,830	-				-1.2
2,093,830	-				+1.6
2,093,830	-				-1.0
2,093,860	+				+1.2
2,093,861	-				-0.1
2,093,861	-				+0.5
2,093,866	+				+3.0
2,093,866	+				+1.0
2,093,866	+				+0.1
2,093,866	+				+0.2
2,093,866	+				-0.1
2,093,866	+				+2.8
2,093,867	-				-0.3
2,093,867	-				+2.8
2,093,909	+				+1.8
2,093,909	+				+1.5
2,093,975	-				+0.6
2,093,975	-				+0.3
2,094,037	+				+0.8
2,094,066	+				-1.9
2,094,066	+				+1.1
2,094,067	-				-0.2
2,094,118	+		IAI47_09885	0.13	-1.9
2,094,118	+		IAI47_09885	0.13	+0.6
2,094,240	-		IAI47_09885	0.25	+0.3
2,094,240	-		IAI47_09885	0.25	+0.5
2,094,266	-		IAI47_09885	0.27	-1.2
2,094,281	+		IAI47_09885	0.29	-0.5
2,094,412	+		IAI47_09885	0.41	+1.1
2,094,413	-		IAI47_09885	0.41	+1.5
2,094,545	-		IAI47_09885	0.54	+0.5
2,094,545	-		IAI47_09885	0.54	-0.4
2,094,554	+		IAI47_09885	0.55	+1.2
2,094,554	+		IAI47_09885	0.55	-2.2
2,094,554	+		IAI47_09885	0.55	-1.3
2,094,554	+		IAI47_09885	0.55	+1.9
2,094,554	+		IAI47_09885	0.55	-0.4
2,094,554	+		IAI47_09885	0.55	-0.9
2,094,555	-		IAI47_09885	0.55	+1.0
2,094,555	-		IAI47_09885	0.55	-0.9
2,094,555	-		IAI47_09885	0.55	-1.4
2,094,555	-		IAI47_09885	0.55	+0.3
2,094,555	-		IAI47_09885	0.55	+1.5
2,094,601	+		IAI47_09885	0.59	+1.0
2,094,601	+		IAI47_09885	0.59	-0.7
2,094,601	+		IAI47_09885	0.59	+1.9
2,094,601	+		IAI47_09885	0.59	+2.5
2,094,601	+		IAI47_09885	0.59	-0.3
2,094,601	+		IAI47_09885	0.59	+1.0
2,094,601	+		IAI47_09885	0.59	-0.3
2,094,602	-		IAI47_09885	0.59	+0.4
2,094,602	-		IAI47_09885	0.59	-1.1
2,094,602	-		IAI47_09885	0.59	+1.5
2,094,602	-		IAI47_09885	0.59	-1.1
2,094,602	-		IAI47_09885	0.59	+1.8
2,094,623	-		IAI47_09885	0.61	-0.8
2,094,653	+		IAI47_09885	0.64	+3.8
2,094,653	+		IAI47_09885	0.64	+0.7
2,094,654	-		IAI47_09885	0.64	+1.2
2,094,654	-		IAI47_09885	0.64	+1.5
2,094,654	-		IAI47_09885	0.64	+0.6
2,094,654	-		IAI47_09885	0.64	-0.2
2,094,676	+		IAI47_09885	0.66	+0.8
2,094,677	-		IAI47_09885	0.66	-1.4
2,094,703	+		IAI47_09885	0.69	+0.7
2,094,704	-		IAI47_09885	0.69	+2.1
2,094,794	-		IAI47_09885	0.77	-0.0
2,094,832	+		IAI47_09885	0.81	-1.3
2,094,833	-		IAI47_09885	0.81	+0.2
2,094,835	+		IAI47_09885	0.81	+0.6
2,094,835	+		IAI47_09885	0.81	-0.4
2,094,835	+		IAI47_09885	0.81	+0.8
2,094,835	+		IAI47_09885	0.81	+0.1
2,094,835	+		IAI47_09885	0.81	+2.8
2,094,835	+		IAI47_09885	0.81	+2.5
2,094,835	+		IAI47_09885	0.81	+1.2
2,094,835	+		IAI47_09885	0.81	-0.0
2,094,835	+		IAI47_09885	0.81	-1.1
2,094,836	-		IAI47_09885	0.81	+2.8
2,094,836	-		IAI47_09885	0.81	+0.1
2,094,836	-		IAI47_09885	0.81	-0.0
2,094,836	-		IAI47_09885	0.81	-0.2
2,094,904	+		IAI47_09885	0.87	+0.7
2,094,905	-		IAI47_09885	0.88	+0.8
2,094,905	-		IAI47_09885	0.88	-0.2
2,094,911	+		IAI47_09885	0.88	-0.1
2,094,911	+		IAI47_09885	0.88	+0.6
2,094,912	-		IAI47_09885	0.88	-0.0