Strain Fitness in Pantoea sp. MT58 around IAI47_09835

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,081,658	+		IAI47_09830	0.55	+1.2
2,081,658	+		IAI47_09830	0.55	+2.5
2,081,658	+		IAI47_09830	0.55	-0.8
2,081,658	+		IAI47_09830	0.55	-0.7
2,081,658	+		IAI47_09830	0.55	+0.5
2,081,659	-		IAI47_09830	0.55	+0.5
2,081,659	-		IAI47_09830	0.55	+3.1
2,081,659	-		IAI47_09830	0.55	+1.8
2,081,659	-		IAI47_09830	0.55	-0.5
2,081,697	+		IAI47_09830	0.57	-1.9
2,081,718	+		IAI47_09830	0.58	+0.6
2,081,718	+		IAI47_09830	0.58	+2.6
2,081,718	+		IAI47_09830	0.58	-0.7
2,081,719	-		IAI47_09830	0.58	-0.7
2,081,719	-		IAI47_09830	0.58	+1.2
2,081,719	-		IAI47_09830	0.58	+0.2
2,081,760	+		IAI47_09830	0.60	-1.1
2,081,760	+		IAI47_09830	0.60	-1.1
2,081,760	+		IAI47_09830	0.60	-2.3
2,081,761	-		IAI47_09830	0.60	-1.3
2,081,761	-		IAI47_09830	0.60	-1.0
2,081,761	-		IAI47_09830	0.60	+1.0
2,081,761	-		IAI47_09830	0.60	-0.8
2,081,761	-		IAI47_09830	0.60	-0.8
2,081,762	+		IAI47_09830	0.60	+0.2
2,081,774	+		IAI47_09830	0.61	+1.2
2,081,856	+		IAI47_09830	0.65	-2.1
2,081,856	+		IAI47_09830	0.65	-0.3
2,081,856	+		IAI47_09830	0.65	-1.1
2,081,856	+		IAI47_09830	0.65	+1.3
2,081,856	+		IAI47_09830	0.65	+1.0
2,081,856	+		IAI47_09830	0.65	+3.9
2,081,856	+		IAI47_09830	0.65	+1.9
2,081,856	+		IAI47_09830	0.65	+0.1
2,081,856	+		IAI47_09830	0.65	-0.7
2,081,856	+		IAI47_09830	0.65	+1.4
2,081,857	-		IAI47_09830	0.65	+0.8
2,081,858	+		IAI47_09830	0.65	+0.8
2,081,858	+		IAI47_09830	0.65	+0.8
2,081,867	+		IAI47_09830	0.65	+1.2
2,081,867	+		IAI47_09830	0.65	+0.7
2,081,867	+		IAI47_09830	0.65	-0.5
2,081,867	+		IAI47_09830	0.65	+0.4
2,081,867	+		IAI47_09830	0.65	-1.4
2,081,868	-		IAI47_09830	0.65	-1.5
2,081,868	-		IAI47_09830	0.65	-0.5
2,081,872	-		IAI47_09830	0.66	+0.5
2,081,924	+		IAI47_09830	0.68	+0.3
2,081,924	+		IAI47_09830	0.68	+0.7
2,081,924	+		IAI47_09830	0.68	+0.4
2,081,924	+		IAI47_09830	0.68	+0.1
2,081,925	-		IAI47_09830	0.68	-1.0
2,081,925	-		IAI47_09830	0.68	-0.7
2,081,925	-		IAI47_09830	0.68	-0.2
2,081,925	-		IAI47_09830	0.68	+2.0
2,081,925	-		IAI47_09830	0.68	-1.5
2,082,078	+		IAI47_09830	0.76	+0.4
2,082,078	+		IAI47_09830	0.76	-0.8
2,082,078	+		IAI47_09830	0.76	+2.0
2,082,079	-		IAI47_09830	0.76	+2.0
2,082,079	-		IAI47_09830	0.76	-1.1
2,082,079	-		IAI47_09830	0.76	-1.5
2,082,162	+		IAI47_09830	0.80	-0.2
2,082,212	+		IAI47_09830	0.82	+0.5
2,082,213	-		IAI47_09830	0.82	+0.2
2,082,213	-		IAI47_09830	0.82	-0.2
2,082,213	-		IAI47_09830	0.82	-0.5
2,082,281	+		IAI47_09830	0.86	+0.3
2,082,281	+		IAI47_09830	0.86	-0.5
2,082,281	+		IAI47_09830	0.86	-0.9
2,082,281	+		IAI47_09830	0.86	+1.3
2,082,281	+		IAI47_09830	0.86	+0.5
2,082,282	-		IAI47_09830	0.86	+0.4
2,082,282	-		IAI47_09830	0.86	+0.3
2,082,282	-		IAI47_09830	0.86	+1.2
2,082,282	-		IAI47_09830	0.86	+1.1
2,082,282	-		IAI47_09830	0.86	-1.0
2,082,321	+		IAI47_09830	0.88	+0.2
2,082,360	+		IAI47_09830	0.89	+1.3
2,082,361	-		IAI47_09830	0.89	-0.7
2,082,361	-		IAI47_09830	0.89	+0.6
2,082,363	+		IAI47_09830	0.90	-0.3
2,082,363	+		IAI47_09830	0.90	-0.2
2,082,363	+		IAI47_09830	0.90	-1.0
2,082,363	+		IAI47_09830	0.90	-1.8
2,082,363	+		IAI47_09830	0.90	+0.3
2,082,363	+		IAI47_09830	0.90	-1.1
2,082,364	-		IAI47_09830	0.90	+0.5
2,082,364	-		IAI47_09830	0.90	+0.3
2,082,364	-		IAI47_09830	0.90	-1.7
2,082,364	-		IAI47_09830	0.90	-0.9
2,082,364	-		IAI47_09830	0.90	-0.3
2,082,364	-		IAI47_09830	0.90	+0.3
2,082,369	+		IAI47_09830	0.90	+0.5
2,082,369	+		IAI47_09830	0.90	-0.1
2,082,369	+		IAI47_09830	0.90	-0.5
2,082,369	+		IAI47_09830	0.90	+1.8
2,082,370	-		IAI47_09830	0.90	-0.5
2,082,370	-		IAI47_09830	0.90	+1.0
2,082,371	+				-1.0
2,082,371	+				-0.0
2,082,371	+				+0.7
2,082,371	+				+0.2
2,082,372	-				-1.3
2,082,372	-				+1.8
2,082,402	+				-0.3
2,082,450	-				+1.0
2,082,494	+				+0.0
2,082,504	+				+3.8
2,082,504	+				-0.0
2,082,505	-				+0.7
2,082,573	+				+0.5
2,082,574	-				-0.3
2,082,609	+				+0.8
2,082,696	+				-0.8
2,082,696	+				-0.7
2,082,697	-				-0.6
2,082,697	-				-1.2
2,082,798	+		IAI47_09835	0.16	+2.0
2,082,803	+		IAI47_09835	0.16	-0.9
2,082,803	+		IAI47_09835	0.16	-2.4
2,082,803	+		IAI47_09835	0.16	-0.7
2,082,803	+		IAI47_09835	0.16	-1.4
2,082,803	+		IAI47_09835	0.16	+0.0
2,082,804	-		IAI47_09835	0.16	-0.8
2,082,804	-		IAI47_09835	0.16	+1.1
2,082,804	-		IAI47_09835	0.16	+1.4
2,082,896	-		IAI47_09835	0.24	+3.0
2,083,007	-		IAI47_09835	0.34	-1.2
2,083,061	+		IAI47_09835	0.38	+1.1
2,083,062	-		IAI47_09835	0.38	+0.0
2,083,128	+		IAI47_09835	0.44	+0.6
2,083,128	+		IAI47_09835	0.44	-0.4
2,083,128	+		IAI47_09835	0.44	-1.4
2,083,129	-		IAI47_09835	0.44	-0.8
2,083,129	-		IAI47_09835	0.44	+0.3
2,083,139	-		IAI47_09835	0.45	+2.0
2,083,186	+		IAI47_09835	0.49	+1.9
2,083,186	+		IAI47_09835	0.49	+0.4
2,083,186	+		IAI47_09835	0.49	-0.2
2,083,186	+		IAI47_09835	0.49	+0.3
2,083,186	+		IAI47_09835	0.49	-0.8
2,083,187	-		IAI47_09835	0.49	+0.5
2,083,187	-		IAI47_09835	0.49	-0.6
2,083,187	-		IAI47_09835	0.49	+1.8
2,083,243	+		IAI47_09835	0.54	+0.3
2,083,248	+		IAI47_09835	0.54	+1.6
2,083,287	+		IAI47_09835	0.58	+2.4
2,083,287	+		IAI47_09835	0.58	+1.6
2,083,287	+		IAI47_09835	0.58	-0.2
2,083,287	+		IAI47_09835	0.58	+1.0
2,083,287	+		IAI47_09835	0.58	-1.7
2,083,288	-		IAI47_09835	0.58	-1.5
2,083,288	-		IAI47_09835	0.58	+0.2
2,083,288	-		IAI47_09835	0.58	+0.7
2,083,288	-		IAI47_09835	0.58	+0.1
2,083,288	-		IAI47_09835	0.58	-2.2
2,083,288	-		IAI47_09835	0.58	+1.5
2,083,288	-		IAI47_09835	0.58	-0.2
2,083,288	-		IAI47_09835	0.58	+2.4
2,083,352	-		IAI47_09835	0.63	+1.4
2,083,438	+		IAI47_09835	0.71	-0.4
2,083,438	+		IAI47_09835	0.71	+1.5
2,083,479	+		IAI47_09835	0.74	-0.2
2,083,486	-		IAI47_09835	0.75	-0.1
2,083,486	-		IAI47_09835	0.75	-0.0
2,083,557	+		IAI47_09835	0.81	-0.2
2,083,557	+		IAI47_09835	0.81	+2.0
2,083,576	+		IAI47_09835	0.83	+3.2
2,083,627	+		IAI47_09835	0.87	+3.4
2,083,627	+		IAI47_09835	0.87	-0.4
2,083,628	-		IAI47_09835	0.87	-1.2
2,083,628	-		IAI47_09835	0.87	+0.5
2,083,690	-				+3.0
2,083,774	+				-1.9
2,083,774	+				+0.1
2,083,793	+				+4.6
2,083,794	-				+1.7
2,083,794	-				-0.9
2,083,794	-				-1.9
2,083,794	-				+0.6
2,083,831	-				+0.1
2,083,866	+				+1.0
2,083,877	-				+1.1
2,083,877	-				+1.2
2,083,877	-				+0.8
2,083,878	+				-0.5
2,083,879	-				+2.4
2,083,924	+				-1.3
2,083,924	+				-1.5
2,083,924	+				+2.6
2,083,924	+				+0.9
2,083,924	+				+0.5
2,083,924	+				-0.2
2,083,925	-				+2.2
2,083,925	-				+2.2
2,083,925	-				+0.7
2,083,925	-				+0.3
2,083,925	-				+1.6
2,083,925	-				-0.1
2,083,925	-				-0.4
2,083,925	-				+0.3
2,083,925	-				-0.6
2,083,925	-				-2.0
2,084,026	+				-2.0
2,084,027	-				-0.9
2,084,027	-				+1.3
2,084,027	-				+0.2
2,084,054	+				-0.0
2,084,055	-				-0.9
2,084,060	+				-0.7
2,084,060	+				-0.2
2,084,061	-				-0.8
2,084,061	-				+1.2
2,084,063	-				+2.6
2,084,087	+				+1.0
2,084,094	+				+0.5
2,084,094	+				+0.7
2,084,138	+				+1.5
2,084,138	+				+0.4
2,084,138	+				+0.2
2,084,139	-				-0.2
2,084,184	+				+0.9
2,084,185	-				-1.6
2,084,185	-				+2.3
2,084,194	+				+1.8
2,084,194	+				+2.2
2,084,194	+				-0.0
2,084,194	+				+2.5
2,084,194	+				+2.8
2,084,194	+				-0.3
2,084,194	+				-2.3
2,084,194	+				-1.4
2,084,194	+				-0.7
2,084,194	+				-0.6
2,084,194	+				+3.1
2,084,194	+				-0.2
2,084,194	+				-1.9
2,084,195	-				-1.7
2,084,195	-				-0.3
2,084,195	-				+0.8
2,084,195	-				+2.5
2,084,195	-				+0.1
2,084,195	-				-1.2
2,084,195	-				-0.2
2,084,195	-				+0.8
2,084,195	-				-1.3
2,084,195	-				-1.5
2,084,195	-				+0.8
2,084,195	-				-1.0
2,084,195	-				+1.5
2,084,231	-				+0.5
2,084,284	-				-0.9
2,084,317	-				-1.1
2,084,317	-				+1.4
2,084,322	-				-0.4
2,084,354	+				+0.5
2,084,354	+				+0.1
2,084,356	+				+1.3
2,084,356	+				-0.7
2,084,357	-				+1.0
2,084,357	-				+0.9
2,084,357	-				+1.2
2,084,357	-				-0.4
2,084,357	-				+0.8
2,084,372	+				-0.5
2,084,372	+				+0.9
2,084,372	+				-2.8
2,084,372	+				+0.8
2,084,372	+				-0.9
2,084,372	+				+1.0
2,084,372	+				+0.0
2,084,372	+				+0.5
2,084,372	+				+0.2
2,084,373	-				+0.6
2,084,373	-				+0.7
2,084,373	-				-1.3
2,084,373	-				+1.6
2,084,373	-				-0.6
2,084,415	-				-0.8
2,084,435	+				+0.2
2,084,435	+				+0.8
2,084,435	+				+1.5
2,084,435	+				+2.4
2,084,436	-				-0.4
2,084,439	-				-1.1
2,084,444	-				+2.0
2,084,463	+				+1.0
2,084,463	+				+0.2
2,084,493	+				+1.9
2,084,494	-				-0.2
2,084,601	-		IAI47_09840	0.18	+0.2
2,084,728	+		IAI47_09840	0.29	+4.8