Strain Fitness in Pantoea sp. MT58 around IAI47_14605

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,079,070	+		IAI47_14595	0.82	-1.8
3,079,070	+		IAI47_14595	0.82	+0.9
3,079,136	+		IAI47_14595	0.85	+1.4
3,079,136	+		IAI47_14595	0.85	-1.8
3,079,137	-		IAI47_14595	0.86	-1.5
3,079,169	+		IAI47_14595	0.87	-3.1
3,079,169	+		IAI47_14595	0.87	-1.3
3,079,169	+		IAI47_14595	0.87	-0.3
3,079,170	-		IAI47_14595	0.87	-1.0
3,079,170	-		IAI47_14595	0.87	+0.9
3,079,170	-		IAI47_14595	0.87	-1.6
3,079,170	-		IAI47_14595	0.87	-0.5
3,079,181	+		IAI47_14595	0.88	-1.2
3,079,182	-		IAI47_14595	0.88	+0.3
3,079,255	+				-3.0
3,079,255	+				+0.0
3,079,255	+				-0.7
3,079,256	-				+1.3
3,079,256	-				-0.3
3,079,256	-				-0.9
3,079,279	+				-1.8
3,079,280	-				-1.9
3,079,280	-				-1.9
3,079,305	+				-0.6
3,079,305	+				+0.3
3,079,305	+				-0.9
3,079,305	+				-1.2
3,079,306	-				+0.2
3,079,306	-				-0.7
3,079,311	+				-1.5
3,079,311	+				-0.1
3,079,311	+				-0.8
3,079,311	+				-1.7
3,079,311	+				-1.7
3,079,311	+				-3.1
3,079,311	+				-1.7
3,079,311	+				-0.6
3,079,311	+				-1.0
3,079,312	-				-2.2
3,079,312	-				+0.3
3,079,318	-				-2.5
3,079,340	+				-0.9
3,079,364	+				-2.8
3,079,365	-				-0.9
3,079,365	-				-0.6
3,079,373	-				-1.6
3,079,433	-				+0.5
3,079,433	-				-1.3
3,079,445	+				+0.5
3,079,445	+				-1.9
3,079,446	-				-1.0
3,079,446	-				+2.4
3,079,446	-				+0.0
3,079,446	-				+1.5
3,079,449	+				-0.5
3,079,449	+				+1.7
3,079,450	-				+1.7
3,079,450	-				+1.0
3,079,450	-				+0.8
3,079,450	-				+1.1
3,079,450	-				+1.5
3,079,450	-				+0.9
3,079,450	-				+0.4
3,079,508	-		IAI47_14600	0.20	+0.8
3,079,517	+		IAI47_14600	0.22	-0.4
3,079,518	-		IAI47_14600	0.22	+0.6
3,079,529	+		IAI47_14600	0.24	-0.5
3,079,529	+		IAI47_14600	0.24	-1.4
3,079,529	+		IAI47_14600	0.24	-0.4
3,079,529	+		IAI47_14600	0.24	-1.4
3,079,529	+		IAI47_14600	0.24	-0.3
3,079,529	+		IAI47_14600	0.24	-1.6
3,079,530	-		IAI47_14600	0.24	+1.8
3,079,530	-		IAI47_14600	0.24	+1.2
3,079,530	-		IAI47_14600	0.24	+0.9
3,079,539	+		IAI47_14600	0.26	+0.9
3,079,565	+		IAI47_14600	0.32	-0.7
3,079,565	+		IAI47_14600	0.32	+2.2
3,079,565	+		IAI47_14600	0.32	-2.2
3,079,566	-		IAI47_14600	0.32	+1.4
3,079,566	-		IAI47_14600	0.32	-0.3
3,079,571	+		IAI47_14600	0.33	-1.3
3,079,571	+		IAI47_14600	0.33	-1.9
3,079,571	+		IAI47_14600	0.33	-2.4
3,079,571	+		IAI47_14600	0.33	+0.6
3,079,571	+		IAI47_14600	0.33	-0.6
3,079,572	-		IAI47_14600	0.34	+0.7
3,079,572	-		IAI47_14600	0.34	+0.7
3,079,572	-		IAI47_14600	0.34	+0.4
3,079,572	-		IAI47_14600	0.34	+1.4
3,079,572	-		IAI47_14600	0.34	+0.6
3,079,572	-		IAI47_14600	0.34	+2.1
3,079,590	-		IAI47_14600	0.37	+1.1
3,079,590	-		IAI47_14600	0.37	+1.1
3,079,614	+		IAI47_14600	0.43	-0.2
3,079,614	+		IAI47_14600	0.43	+0.1
3,079,614	+		IAI47_14600	0.43	-0.5
3,079,614	+		IAI47_14600	0.43	+1.3
3,079,614	+		IAI47_14600	0.43	-2.5
3,079,615	-		IAI47_14600	0.43	+1.5
3,079,615	-		IAI47_14600	0.43	+0.1
3,079,615	-		IAI47_14600	0.43	+0.3
3,079,615	-		IAI47_14600	0.43	+0.7
3,079,615	-		IAI47_14600	0.43	+1.1
3,079,640	+		IAI47_14600	0.48	+0.7
3,079,677	+		IAI47_14600	0.56	+0.8
3,079,677	+		IAI47_14600	0.56	+0.1
3,079,677	+		IAI47_14600	0.56	+1.2
3,079,677	+		IAI47_14600	0.56	+0.0
3,079,677	+		IAI47_14600	0.56	-0.3
3,079,677	+		IAI47_14600	0.56	+0.9
3,079,677	+		IAI47_14600	0.56	+1.6
3,079,677	+		IAI47_14600	0.56	-1.6
3,079,677	+		IAI47_14600	0.56	-2.4
3,079,677	+		IAI47_14600	0.56	+2.0
3,079,678	-		IAI47_14600	0.56	+1.9
3,079,678	-		IAI47_14600	0.56	+1.6
3,079,678	-		IAI47_14600	0.56	-1.1
3,079,678	-		IAI47_14600	0.56	-0.0
3,079,678	-		IAI47_14600	0.56	+3.7
3,079,678	-		IAI47_14600	0.56	+1.0
3,079,678	-		IAI47_14600	0.56	+0.9
3,079,678	-		IAI47_14600	0.56	+1.3
3,079,678	-		IAI47_14600	0.56	+0.7
3,079,705	-		IAI47_14600	0.62	+2.2
3,079,738	-		IAI47_14600	0.69	+0.4
3,079,738	-		IAI47_14600	0.69	-0.6
3,079,738	-		IAI47_14600	0.69	+0.7
3,079,738	-		IAI47_14600	0.69	+0.4
3,079,738	-		IAI47_14600	0.69	+0.7
3,079,788	+		IAI47_14600	0.80	+2.2
3,079,788	+		IAI47_14600	0.80	+0.9
3,079,788	+		IAI47_14600	0.80	-0.5
3,079,788	+		IAI47_14600	0.80	-0.7
3,079,788	+		IAI47_14600	0.80	-0.4
3,079,789	-		IAI47_14600	0.81	+1.2
3,079,789	-		IAI47_14600	0.81	+1.2
3,079,789	-		IAI47_14600	0.81	+1.5
3,079,827	+		IAI47_14600	0.89	+0.6
3,079,921	-				-1.2
3,080,021	+				+0.3
3,080,034	-				+1.2
3,080,034	-				+1.8
3,080,109	+		IAI47_14605	0.11	-0.3
3,080,109	+		IAI47_14605	0.11	-2.7
3,080,109	+		IAI47_14605	0.11	+0.8
3,080,110	-		IAI47_14605	0.11	-0.4
3,080,147	+		IAI47_14605	0.15	-0.3
3,080,148	-		IAI47_14605	0.15	-0.1
3,080,189	+		IAI47_14605	0.19	+0.1
3,080,190	-		IAI47_14605	0.19	+0.8
3,080,190	-		IAI47_14605	0.19	+1.6
3,080,190	-		IAI47_14605	0.19	+1.1
3,080,201	+		IAI47_14605	0.20	+0.4
3,080,201	+		IAI47_14605	0.20	-0.5
3,080,201	+		IAI47_14605	0.20	-1.0
3,080,201	+		IAI47_14605	0.20	-1.2
3,080,202	-		IAI47_14605	0.20	+0.5
3,080,202	-		IAI47_14605	0.20	+1.8
3,080,211	-		IAI47_14605	0.21	-0.1
3,080,211	-		IAI47_14605	0.21	+2.5
3,080,221	+		IAI47_14605	0.22	-0.6
3,080,221	+		IAI47_14605	0.22	-0.3
3,080,221	+		IAI47_14605	0.22	-0.9
3,080,221	+		IAI47_14605	0.22	-0.1
3,080,221	+		IAI47_14605	0.22	+0.2
3,080,221	+		IAI47_14605	0.22	+1.4
3,080,221	+		IAI47_14605	0.22	+0.9
3,080,221	+		IAI47_14605	0.22	+0.1
3,080,221	+		IAI47_14605	0.22	-2.2
3,080,221	+		IAI47_14605	0.22	-0.4
3,080,222	-		IAI47_14605	0.22	+2.0
3,080,222	-		IAI47_14605	0.22	+1.1
3,080,259	+		IAI47_14605	0.26	-2.1
3,080,259	+		IAI47_14605	0.26	-1.5
3,080,259	+		IAI47_14605	0.26	-2.0
3,080,259	+		IAI47_14605	0.26	+0.0
3,080,260	-		IAI47_14605	0.26	+0.5
3,080,260	-		IAI47_14605	0.26	+0.7
3,080,288	+		IAI47_14605	0.28	-1.1
3,080,288	+		IAI47_14605	0.28	-1.6
3,080,288	+		IAI47_14605	0.28	+1.8
3,080,310	-		IAI47_14605	0.30	+0.5
3,080,322	-		IAI47_14605	0.32	+0.9
3,080,385	+		IAI47_14605	0.38	-1.5
3,080,385	+		IAI47_14605	0.38	+0.3
3,080,385	+		IAI47_14605	0.38	-1.5
3,080,385	+		IAI47_14605	0.38	-0.1
3,080,386	-		IAI47_14605	0.38	+0.5
3,080,386	-		IAI47_14605	0.38	+1.1
3,080,429	+		IAI47_14605	0.42	+0.2
3,080,430	-		IAI47_14605	0.42	-0.4
3,080,441	+		IAI47_14605	0.43	-2.1
3,080,442	-		IAI47_14605	0.43	+0.3
3,080,442	-		IAI47_14605	0.43	+0.3
3,080,445	+		IAI47_14605	0.43	-0.7
3,080,445	+		IAI47_14605	0.43	-0.0
3,080,445	+		IAI47_14605	0.43	-0.3
3,080,446	-		IAI47_14605	0.44	-0.5
3,080,446	-		IAI47_14605	0.44	+2.2
3,080,478	-		IAI47_14605	0.47	-0.5
3,080,478	-		IAI47_14605	0.47	-2.9
3,080,478	-		IAI47_14605	0.47	+0.6
3,080,524	-		IAI47_14605	0.51	+0.3
3,080,537	+		IAI47_14605	0.52	-0.4
3,080,538	-		IAI47_14605	0.52	+3.5
3,080,538	-		IAI47_14605	0.52	-0.8
3,080,538	-		IAI47_14605	0.52	+1.2
3,080,589	+		IAI47_14605	0.57	+0.0
3,080,589	+		IAI47_14605	0.57	+1.9
3,080,590	-		IAI47_14605	0.57	+0.5
3,080,591	+		IAI47_14605	0.58	+0.2
3,080,591	+		IAI47_14605	0.58	-1.6
3,080,626	+		IAI47_14605	0.61	-2.9
3,080,658	+		IAI47_14605	0.64	+1.5
3,080,658	+		IAI47_14605	0.64	-1.2
3,080,731	+		IAI47_14605	0.71	-0.9
3,080,744	+		IAI47_14605	0.72	-0.4
3,080,744	+		IAI47_14605	0.72	+0.5
3,080,745	-		IAI47_14605	0.72	+1.1
3,080,771	-		IAI47_14605	0.75	-1.4
3,080,771	-		IAI47_14605	0.75	-0.1
3,080,771	-		IAI47_14605	0.75	-0.4
3,080,847	-		IAI47_14605	0.82	-2.6
3,080,855	+		IAI47_14605	0.83	-0.2
3,080,856	-		IAI47_14605	0.83	-0.4
3,080,856	-		IAI47_14605	0.83	+0.2
3,080,950	-				+0.6
3,080,961	+				-1.0
3,080,961	+				+3.2
3,080,961	+				-1.0
3,080,961	+				+2.0
3,080,961	+				+0.9
3,080,961	+				-0.4
3,080,961	+				-1.2
3,080,961	+				+1.8
3,080,961	+				+0.7
3,080,961	+				+0.8
3,080,961	+				+0.4
3,080,962	-				+0.8
3,080,962	-				+1.2
3,080,962	-				-0.6
3,080,962	-				-0.5
3,080,962	-				-1.2
3,080,962	-				+1.3
3,080,962	-				+2.6
3,080,962	-				+0.3
3,080,964	+				-0.8
3,080,964	+				+1.0
3,080,964	+				+0.3
3,080,965	-				-0.8
3,080,965	-				-0.1
3,080,965	-				-1.4
3,080,965	-				-0.0
3,080,965	-				-1.0
3,080,981	-				+0.7
3,080,990	+				-0.5
3,080,990	+				-1.0
3,080,991	-				-2.1
3,080,991	-				-0.3
3,080,991	-				-0.1
3,081,080	+				+0.8
3,081,080	+				+0.8
3,081,081	-				-0.0
3,081,081	-				+0.8
3,081,097	-				-1.3
3,081,112	+				-0.1
3,081,113	-				-0.1
3,081,113	-				+0.9
3,081,113	-				+0.8
3,081,116	+				-1.0
3,081,117	-				-2.5
3,081,148	+		IAI47_14610	0.10	+0.5
3,081,148	+		IAI47_14610	0.10	+0.0
3,081,149	-		IAI47_14610	0.10	-0.4
3,081,149	-		IAI47_14610	0.10	-0.4
3,081,149	-		IAI47_14610	0.10	-0.3
3,081,149	-		IAI47_14610	0.10	-0.4
3,081,152	-		IAI47_14610	0.11	+0.6
3,081,157	+		IAI47_14610	0.11	-1.3
3,081,158	-		IAI47_14610	0.11	-1.9
3,081,264	+		IAI47_14610	0.24	+1.7
3,081,264	+		IAI47_14610	0.24	+0.1
3,081,264	+		IAI47_14610	0.24	+0.4
3,081,264	+		IAI47_14610	0.24	-2.9
3,081,264	+		IAI47_14610	0.24	+1.5
3,081,264	+		IAI47_14610	0.24	+1.2
3,081,264	+		IAI47_14610	0.24	-1.9
3,081,265	-		IAI47_14610	0.24	+1.0
3,081,265	-		IAI47_14610	0.24	+0.3
3,081,265	-		IAI47_14610	0.24	-0.5
3,081,265	-		IAI47_14610	0.24	-0.1
3,081,265	-		IAI47_14610	0.24	+1.3
3,081,298	+		IAI47_14610	0.28	+0.0
3,081,298	+		IAI47_14610	0.28	-0.1
3,081,298	+		IAI47_14610	0.28	-0.4
3,081,298	+		IAI47_14610	0.28	-1.3
3,081,298	+		IAI47_14610	0.28	-0.1
3,081,298	+		IAI47_14610	0.28	+0.6
3,081,299	-		IAI47_14610	0.29	+1.1
3,081,299	-		IAI47_14610	0.29	+0.8
3,081,299	-		IAI47_14610	0.29	+0.7
3,081,299	-		IAI47_14610	0.29	+0.9
3,081,299	-		IAI47_14610	0.29	-0.2
3,081,299	-		IAI47_14610	0.29	-0.7
3,081,375	+		IAI47_14610	0.38	-0.8
3,081,375	+		IAI47_14610	0.38	+1.1
3,081,375	+		IAI47_14610	0.38	-1.2
3,081,442	-		IAI47_14610	0.46	+0.3
3,081,576	+		IAI47_14610	0.62	-0.0
3,081,577	-		IAI47_14610	0.62	+0.2
3,081,654	+		IAI47_14610	0.72	+0.9
3,081,654	+		IAI47_14610	0.72	-0.1
3,081,654	+		IAI47_14610	0.72	-0.4
3,081,654	+		IAI47_14610	0.72	-0.5
3,081,654	+		IAI47_14610	0.72	+2.0
3,081,654	+		IAI47_14610	0.72	-1.2
3,081,654	+		IAI47_14610	0.72	-0.1
3,081,655	-		IAI47_14610	0.72	+2.2
3,081,655	-		IAI47_14610	0.72	-1.1
3,081,655	-		IAI47_14610	0.72	+1.2
3,081,677	-		IAI47_14610	0.75	+0.9
3,081,777	+		IAI47_14610	0.87	-1.1
3,081,778	-		IAI47_14610	0.87	-0.9
3,081,778	-		IAI47_14610	0.87	+0.3
3,081,875	-				-0.0
3,081,913	+				+0.5
3,081,913	+				+1.3
3,081,913	+				+0.4
3,081,914	-				-0.1
3,081,914	-				+0.6
3,081,914	-				+0.3
3,081,914	-				-0.2
3,081,916	+				-0.0
3,081,916	+				+1.0
3,081,938	+				-1.6
3,081,939	-				-0.4
3,081,948	+				-0.1
3,081,948	+				+1.2
3,081,949	-				-0.6
3,081,949	-				+1.3
3,081,989	-				+0.8
3,081,989	-				+0.9
3,081,989	-				-0.1
3,081,997	+				+2.3